ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:0607:0608

Extra

PDB:
ATOM 1 O3' G A 606 31.123 113.054 99.987 1.00 43.50 O
ATOM 2 P U A 607 32.329 113.290 101.028 1.00 44.00 P
ATOM 3 OP1 U A 607 33.191 112.075 100.958 1.00 40.72 O
ATOM 4 OP2 U A 607 31.825 113.767 102.341 1.00 42.71 O
ATOM 5 O5' U A 607 33.172 114.471 100.378 1.00 45.34 O
ATOM 6 C5' U A 607 32.654 115.809 100.257 1.00 44.15 C
ATOM 7 C4' U A 607 33.790 116.758 99.951 1.00 42.52 C
ATOM 8 O4' U A 607 34.655 116.826 101.109 1.00 41.86 O
ATOM 9 C3' U A 607 34.706 116.327 98.813 1.00 41.41 C
ATOM 10 O3' U A 607 34.197 116.812 97.576 1.00 41.68 O
ATOM 11 C2' U A 607 36.025 117.010 99.170 1.00 42.81 C
ATOM 12 O2' U A 607 36.059 118.379 98.823 1.00 43.07 O
ATOM 13 C1' U A 607 36.001 116.954 100.697 1.00 41.32 C
ATOM 14 N1 U A 607 36.787 115.882 101.323 1.00 40.82 N
ATOM 15 C2 U A 607 38.017 116.222 101.866 1.00 41.84 C
ATOM 16 O2 U A 607 38.512 117.340 101.769 1.00 43.13 O
ATOM 17 N3 U A 607 38.640 115.208 102.547 1.00 40.48 N
ATOM 18 C4 U A 607 38.176 113.934 102.740 1.00 38.99 C
ATOM 19 O4 U A 607 38.826 113.162 103.450 1.00 38.98 O
ATOM 20 C5 U A 607 36.945 113.635 102.083 1.00 38.28 C
ATOM 21 C6 U A 607 36.314 114.592 101.402 1.00 39.38 C
ATOM 22 P A A 608 33.786 115.788 96.410 1.00 42.08 P
ATOM 23 OP1 A A 608 32.557 116.343 95.790 1.00 41.91 O
ATOM 24 OP2 A A 608 33.792 114.399 96.914 1.00 42.45 O
ATOM 25 O5' A A 608 34.960 115.884 95.335 1.00 42.42 O
TER

ATOM 1 O3' U B 607 34.197 116.812 97.576 1.00 41.68 O
ATOM 2 P A B 608 33.786 115.788 96.410 1.00 42.08 P
ATOM 3 OP1 A B 608 32.557 116.343 95.790 1.00 41.91 O
ATOM 4 OP2 A B 608 33.792 114.399 96.914 1.00 42.45 O
ATOM 5 O5' A B 608 34.960 115.884 95.335 1.00 42.42 O
ATOM 6 C5' A B 608 35.488 117.141 94.921 1.00 35.96 C
ATOM 7 C4' A B 608 34.784 117.630 93.680 1.00 35.63 C
ATOM 8 O4' A B 608 35.147 119.018 93.503 1.00 35.90 O
ATOM 9 C3' A B 608 35.099 116.958 92.342 1.00 34.18 C
ATOM 10 O3' A B 608 34.232 115.855 92.073 1.00 35.21 O
ATOM 11 C2' A B 608 34.803 118.079 91.360 1.00 35.86 C
ATOM 12 O2' A B 608 33.408 118.259 91.176 1.00 32.72 O
ATOM 13 C1' A B 608 35.319 119.296 92.129 1.00 35.93 C
ATOM 14 N9 A B 608 36.727 119.640 91.920 1.00 36.50 N
ATOM 15 C8 A B 608 37.764 119.444 92.793 1.00 35.44 C
ATOM 16 N7 A B 608 38.908 119.909 92.368 1.00 37.09 N
ATOM 17 C5 A B 608 38.613 120.434 91.124 1.00 37.53 C
ATOM 18 C6 A B 608 39.402 121.085 90.166 1.00 39.54 C
ATOM 19 N6 A B 608 40.699 121.333 90.330 1.00 38.83 N
ATOM 20 N1 A B 608 38.803 121.486 89.021 1.00 39.06 N
ATOM 21 C2 A B 608 37.499 121.246 88.869 1.00 38.83 C
ATOM 22 N3 A B 608 36.650 120.646 89.701 1.00 38.86 N
ATOM 23 C4 A B 608 37.276 120.262 90.825 1.00 37.99 C
ATOM 24 P C B 609 34.726 114.638 91.140 1.00 34.37 P
ATOM 25 OP1 C B 609 33.534 113.817 90.818 1.00 36.78 O
ATOM 26 OP2 C B 609 35.897 113.991 91.777 1.00 35.80 O
ATOM 27 O5' C B 609 35.203 115.328 89.785 1.00 35.06 O
TER

Atoms:
C4: (38.176,113.934,102.740)
N3: (38.640,115.208,102.547)
OP1: (33.191,112.075,100.958)
OP2: (31.825,113.767,102.341)
C2: (38.017,116.222,101.866)
C1': (36.001,116.954,100.697)
C3': (34.706,116.327,98.813)
O5': (33.172,114.471,100.378)
O4': (34.655,116.826,101.109)
C5': (32.654,115.809,100.257)
P: (32.329,113.290,101.028)
C4': (33.790,116.758,99.951)
C2': (36.025,117.010,99.170)
O2': (36.059,118.379,98.823)
N1: (36.787,115.882,101.323)
O4: (38.826,113.162,103.450)
O2: (38.512,117.340,101.769)
C6: (36.314,114.592,101.402)
C5: (36.945,113.635,102.083)
O3': (34.197,116.812,97.576)
OP1: (32.557,116.343,95.790)
OP2: (33.792,114.399,96.914)
C3': (35.099,116.958,92.342)
C1': (35.319,119.296,92.129)
C5': (35.488,117.141,94.921)
O4': (35.147,119.018,93.503)
C8: (37.764,119.444,92.793)
O2': (33.408,118.259,91.176)
C6: (39.402,121.085,90.166)
C5: (38.613,120.434,91.124)
C4: (37.276,120.262,90.825)
P: (33.786,115.788,96.410)
C4': (34.784,117.630,93.680)
C2': (34.803,118.079,91.360)
C2: (37.499,121.246,88.869)
N1: (38.803,121.486,89.021)
N3: (36.650,120.646,89.701)
N6: (40.699,121.333,90.330)
N7: (38.908,119.909,92.368)
N9: (36.727,119.640,91.920)
O5': (34.960,115.884,95.335)
O3': (34.232,115.855,92.073)
Image (generated by PyMOL):
PyMOL image
show in jmol