ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YHQ:0607:0608

Extra

PDB:
ATOM 1 O3' G A 606 31.127 113.402 99.885 1.00 36.40 O
ATOM 2 P U A 607 32.294 113.596 100.969 1.00 38.00 P
ATOM 3 OP1 U A 607 33.079 112.332 100.907 1.00 32.96 O
ATOM 4 OP2 U A 607 31.769 114.090 102.277 1.00 35.96 O
ATOM 5 O5' U A 607 33.201 114.754 100.361 1.00 38.75 O
ATOM 6 C5' U A 607 32.710 116.099 100.195 1.00 37.20 C
ATOM 7 C4' U A 607 33.866 117.022 99.882 1.00 35.24 C
ATOM 8 O4' U A 607 34.740 117.075 101.036 1.00 35.22 O
ATOM 9 C3' U A 607 34.764 116.566 98.738 1.00 33.32 C
ATOM 10 O3' U A 607 34.256 117.048 97.495 1.00 31.06 O
ATOM 11 C2' U A 607 36.103 117.212 99.083 1.00 33.71 C
ATOM 12 O2' U A 607 36.182 118.572 98.709 1.00 36.29 O
ATOM 13 C1' U A 607 36.085 117.170 100.611 1.00 33.05 C
ATOM 14 N1 U A 607 36.850 116.096 101.256 1.00 31.16 N
ATOM 15 C2 U A 607 38.047 116.436 101.847 1.00 31.81 C
ATOM 16 O2 U A 607 38.543 117.553 101.759 1.00 34.45 O
ATOM 17 N3 U A 607 38.653 115.421 102.539 1.00 30.69 N
ATOM 18 C4 U A 607 38.208 114.128 102.680 1.00 30.18 C
ATOM 19 O4 U A 607 38.766 113.388 103.490 1.00 30.09 O
ATOM 20 C5 U A 607 36.999 113.838 101.980 1.00 30.11 C
ATOM 21 C6 U A 607 36.377 114.808 101.309 1.00 31.10 C
ATOM 22 P A A 608 33.807 116.019 96.349 1.00 30.66 P
ATOM 23 OP1 A A 608 32.589 116.591 95.729 1.00 30.70 O
ATOM 24 OP2 A A 608 33.781 114.629 96.865 1.00 33.31 O
ATOM 25 O5' A A 608 34.973 116.078 95.265 1.00 32.75 O
TER

ATOM 1 O3' U B 607 34.256 117.048 97.495 1.00 31.06 O
ATOM 2 P A B 608 33.807 116.019 96.349 1.00 30.66 P
ATOM 3 OP1 A B 608 32.589 116.591 95.729 1.00 30.70 O
ATOM 4 OP2 A B 608 33.781 114.629 96.865 1.00 33.31 O
ATOM 5 O5' A B 608 34.973 116.078 95.265 1.00 32.75 O
ATOM 6 C5' A B 608 35.534 117.323 94.851 1.00 26.81 C
ATOM 7 C4' A B 608 34.853 117.826 93.601 1.00 24.92 C
ATOM 8 O4' A B 608 35.265 119.198 93.430 1.00 26.50 O
ATOM 9 C3' A B 608 35.181 117.154 92.270 1.00 25.05 C
ATOM 10 O3' A B 608 34.339 116.040 91.992 1.00 24.25 O
ATOM 11 C2' A B 608 34.911 118.276 91.279 1.00 26.25 C
ATOM 12 O2' A B 608 33.534 118.474 91.049 1.00 24.20 O
ATOM 13 C1' A B 608 35.413 119.490 92.059 1.00 26.75 C
ATOM 14 N9 A B 608 36.815 119.834 91.835 1.00 28.39 N
ATOM 15 C8 A B 608 37.870 119.599 92.680 1.00 27.70 C
ATOM 16 N7 A B 608 39.007 120.066 92.245 1.00 28.92 N
ATOM 17 C5 A B 608 38.687 120.638 91.025 1.00 29.63 C
ATOM 18 C6 A B 608 39.458 121.313 90.076 1.00 30.69 C
ATOM 19 N6 A B 608 40.761 121.546 90.228 1.00 31.09 N
ATOM 20 N1 A B 608 38.839 121.753 88.956 1.00 29.82 N
ATOM 21 C2 A B 608 37.531 121.527 88.820 1.00 29.36 C
ATOM 22 N3 A B 608 36.694 120.909 89.650 1.00 31.02 N
ATOM 23 C4 A B 608 37.344 120.486 90.750 1.00 29.92 C
ATOM 24 P C B 609 34.855 114.856 91.029 1.00 25.74 P
ATOM 25 OP1 C B 609 33.693 113.997 90.686 1.00 24.90 O
ATOM 26 OP2 C B 609 36.043 114.240 91.667 1.00 24.65 O
ATOM 27 O5' C B 609 35.324 115.590 89.693 1.00 24.88 O
TER

Atoms:
C4: (38.208,114.128,102.680)
N3: (38.653,115.421,102.539)
OP1: (33.079,112.332,100.907)
OP2: (31.769,114.090,102.277)
C2: (38.047,116.436,101.847)
C1': (36.085,117.170,100.611)
C3': (34.764,116.566,98.738)
O5': (33.201,114.754,100.361)
O4': (34.740,117.075,101.036)
C5': (32.710,116.099,100.195)
P: (32.294,113.596,100.969)
C4': (33.866,117.022,99.882)
C2': (36.103,117.212,99.083)
O2': (36.182,118.572,98.709)
N1: (36.850,116.096,101.256)
O4: (38.766,113.388,103.490)
O2: (38.543,117.553,101.759)
C6: (36.377,114.808,101.309)
C5: (36.999,113.838,101.980)
O3': (34.256,117.048,97.495)
OP1: (32.589,116.591,95.729)
OP2: (33.781,114.629,96.865)
C3': (35.181,117.154,92.270)
C1': (35.413,119.490,92.059)
C5': (35.534,117.323,94.851)
O4': (35.265,119.198,93.430)
C8: (37.870,119.599,92.680)
O2': (33.534,118.474,91.049)
C6: (39.458,121.313,90.076)
C5: (38.687,120.638,91.025)
C4: (37.344,120.486,90.750)
P: (33.807,116.019,96.349)
C4': (34.853,117.826,93.601)
C2': (34.911,118.276,91.279)
C2: (37.531,121.527,88.820)
N1: (38.839,121.753,88.956)
N3: (36.694,120.909,89.650)
N6: (40.761,121.546,90.228)
N7: (39.007,120.066,92.245)
N9: (36.815,119.834,91.835)
O5': (34.973,116.078,95.265)
O3': (34.339,116.040,91.992)
Image (generated by PyMOL):
PyMOL image
show in jmol