Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0607:0608
Extra
PDB:
ATOM 1 O3' G A 606 31.036 114.018 99.794 1.00 37.37 O
ATOM 2 P U A 607 32.245 114.224 100.832 1.00 38.93 P
ATOM 3 OP1 U A 607 33.058 112.981 100.716 1.00 35.56 O
ATOM 4 OP2 U A 607 31.759 114.672 102.166 1.00 36.15 O
ATOM 5 O5' U A 607 33.111 115.402 100.204 1.00 37.42 O
ATOM 6 C5' U A 607 32.593 116.725 100.036 1.00 35.91 C
ATOM 7 C4' U A 607 33.737 117.689 99.819 1.00 36.56 C
ATOM 8 O4' U A 607 34.563 117.686 101.007 1.00 37.09 O
ATOM 9 C3' U A 607 34.706 117.328 98.697 1.00 36.01 C
ATOM 10 O3' U A 607 34.249 117.816 97.441 1.00 32.92 O
ATOM 11 C2' U A 607 35.988 118.032 99.128 1.00 37.75 C
ATOM 12 O2' U A 607 35.998 119.419 98.853 1.00 37.85 O
ATOM 13 C1' U A 607 35.918 117.878 100.645 1.00 37.08 C
ATOM 14 N1 U A 607 36.724 116.792 101.218 1.00 36.25 N
ATOM 15 C2 U A 607 37.972 117.122 101.709 1.00 36.47 C
ATOM 16 O2 U A 607 38.465 118.236 101.584 1.00 37.94 O
ATOM 17 N3 U A 607 38.629 116.104 102.346 1.00 34.86 N
ATOM 18 C4 U A 607 38.190 114.817 102.524 1.00 36.09 C
ATOM 19 O4 U A 607 38.818 114.067 103.272 1.00 35.75 O
ATOM 20 C5 U A 607 36.920 114.534 101.925 1.00 37.19 C
ATOM 21 C6 U A 607 36.250 115.508 101.306 1.00 36.71 C
ATOM 22 P A A 608 33.845 116.784 96.286 1.00 32.45 P
ATOM 23 OP1 A A 608 32.619 117.305 95.643 1.00 33.96 O
ATOM 24 OP2 A A 608 33.858 115.402 96.817 1.00 34.74 O
ATOM 25 O5' A A 608 35.036 116.875 95.237 1.00 33.95 O
TER
ATOM 1 O3' U B 607 34.249 117.816 97.441 1.00 32.92 O
ATOM 2 P A B 608 33.845 116.784 96.286 1.00 32.45 P
ATOM 3 OP1 A B 608 32.619 117.305 95.643 1.00 33.96 O
ATOM 4 OP2 A B 608 33.858 115.402 96.817 1.00 34.74 O
ATOM 5 O5' A B 608 35.036 116.875 95.237 1.00 33.95 O
ATOM 6 C5' A B 608 35.554 118.131 94.828 1.00 28.21 C
ATOM 7 C4' A B 608 34.870 118.593 93.568 1.00 27.87 C
ATOM 8 O4' A B 608 35.254 119.967 93.366 1.00 28.52 O
ATOM 9 C3' A B 608 35.216 117.891 92.259 1.00 26.13 C
ATOM 10 O3' A B 608 34.378 116.770 91.996 1.00 24.22 O
ATOM 11 C2' A B 608 34.937 118.983 91.243 1.00 28.00 C
ATOM 12 O2' A B 608 33.552 119.143 91.020 1.00 25.59 O
ATOM 13 C1' A B 608 35.427 120.217 91.992 1.00 28.21 C
ATOM 14 N9 A B 608 36.828 120.571 91.783 1.00 29.37 N
ATOM 15 C8 A B 608 37.873 120.414 92.657 1.00 29.78 C
ATOM 16 N7 A B 608 39.008 120.885 92.211 1.00 31.51 N
ATOM 17 C5 A B 608 38.692 121.373 90.953 1.00 32.13 C
ATOM 18 C6 A B 608 39.458 122.008 89.973 1.00 33.01 C
ATOM 19 N6 A B 608 40.749 122.293 90.123 1.00 35.39 N
ATOM 20 N1 A B 608 38.846 122.357 88.823 1.00 33.27 N
ATOM 21 C2 A B 608 37.546 122.093 88.688 1.00 31.69 C
ATOM 22 N3 A B 608 36.714 121.514 89.541 1.00 31.55 N
ATOM 23 C4 A B 608 37.358 121.172 90.670 1.00 31.38 C
ATOM 24 P C B 609 34.886 115.590 91.020 1.00 26.74 P
ATOM 25 OP1 C B 609 33.717 114.728 90.690 1.00 27.12 O
ATOM 26 OP2 C B 609 36.076 114.973 91.639 1.00 26.85 O
ATOM 27 O5' C B 609 35.336 116.328 89.680 1.00 25.19 O
TER
ATOM 2 P U A 607 32.245 114.224 100.832 1.00 38.93 P
ATOM 3 OP1 U A 607 33.058 112.981 100.716 1.00 35.56 O
ATOM 4 OP2 U A 607 31.759 114.672 102.166 1.00 36.15 O
ATOM 5 O5' U A 607 33.111 115.402 100.204 1.00 37.42 O
ATOM 6 C5' U A 607 32.593 116.725 100.036 1.00 35.91 C
ATOM 7 C4' U A 607 33.737 117.689 99.819 1.00 36.56 C
ATOM 8 O4' U A 607 34.563 117.686 101.007 1.00 37.09 O
ATOM 9 C3' U A 607 34.706 117.328 98.697 1.00 36.01 C
ATOM 10 O3' U A 607 34.249 117.816 97.441 1.00 32.92 O
ATOM 11 C2' U A 607 35.988 118.032 99.128 1.00 37.75 C
ATOM 12 O2' U A 607 35.998 119.419 98.853 1.00 37.85 O
ATOM 13 C1' U A 607 35.918 117.878 100.645 1.00 37.08 C
ATOM 14 N1 U A 607 36.724 116.792 101.218 1.00 36.25 N
ATOM 15 C2 U A 607 37.972 117.122 101.709 1.00 36.47 C
ATOM 16 O2 U A 607 38.465 118.236 101.584 1.00 37.94 O
ATOM 17 N3 U A 607 38.629 116.104 102.346 1.00 34.86 N
ATOM 18 C4 U A 607 38.190 114.817 102.524 1.00 36.09 C
ATOM 19 O4 U A 607 38.818 114.067 103.272 1.00 35.75 O
ATOM 20 C5 U A 607 36.920 114.534 101.925 1.00 37.19 C
ATOM 21 C6 U A 607 36.250 115.508 101.306 1.00 36.71 C
ATOM 22 P A A 608 33.845 116.784 96.286 1.00 32.45 P
ATOM 23 OP1 A A 608 32.619 117.305 95.643 1.00 33.96 O
ATOM 24 OP2 A A 608 33.858 115.402 96.817 1.00 34.74 O
ATOM 25 O5' A A 608 35.036 116.875 95.237 1.00 33.95 O
TER
ATOM 1 O3' U B 607 34.249 117.816 97.441 1.00 32.92 O
ATOM 2 P A B 608 33.845 116.784 96.286 1.00 32.45 P
ATOM 3 OP1 A B 608 32.619 117.305 95.643 1.00 33.96 O
ATOM 4 OP2 A B 608 33.858 115.402 96.817 1.00 34.74 O
ATOM 5 O5' A B 608 35.036 116.875 95.237 1.00 33.95 O
ATOM 6 C5' A B 608 35.554 118.131 94.828 1.00 28.21 C
ATOM 7 C4' A B 608 34.870 118.593 93.568 1.00 27.87 C
ATOM 8 O4' A B 608 35.254 119.967 93.366 1.00 28.52 O
ATOM 9 C3' A B 608 35.216 117.891 92.259 1.00 26.13 C
ATOM 10 O3' A B 608 34.378 116.770 91.996 1.00 24.22 O
ATOM 11 C2' A B 608 34.937 118.983 91.243 1.00 28.00 C
ATOM 12 O2' A B 608 33.552 119.143 91.020 1.00 25.59 O
ATOM 13 C1' A B 608 35.427 120.217 91.992 1.00 28.21 C
ATOM 14 N9 A B 608 36.828 120.571 91.783 1.00 29.37 N
ATOM 15 C8 A B 608 37.873 120.414 92.657 1.00 29.78 C
ATOM 16 N7 A B 608 39.008 120.885 92.211 1.00 31.51 N
ATOM 17 C5 A B 608 38.692 121.373 90.953 1.00 32.13 C
ATOM 18 C6 A B 608 39.458 122.008 89.973 1.00 33.01 C
ATOM 19 N6 A B 608 40.749 122.293 90.123 1.00 35.39 N
ATOM 20 N1 A B 608 38.846 122.357 88.823 1.00 33.27 N
ATOM 21 C2 A B 608 37.546 122.093 88.688 1.00 31.69 C
ATOM 22 N3 A B 608 36.714 121.514 89.541 1.00 31.55 N
ATOM 23 C4 A B 608 37.358 121.172 90.670 1.00 31.38 C
ATOM 24 P C B 609 34.886 115.590 91.020 1.00 26.74 P
ATOM 25 OP1 C B 609 33.717 114.728 90.690 1.00 27.12 O
ATOM 26 OP2 C B 609 36.076 114.973 91.639 1.00 26.85 O
ATOM 27 O5' C B 609 35.336 116.328 89.680 1.00 25.19 O
TER
Atoms:
C4: (38.190,114.817,102.524)
N3: (38.629,116.104,102.346)
OP1: (33.058,112.981,100.716)
OP2: (31.759,114.672,102.166)
C2: (37.972,117.122,101.709)
C1': (35.918,117.878,100.645)
C3': (34.706,117.328,98.697)
O5': (33.111,115.402,100.204)
O4': (34.563,117.686,101.007)
C5': (32.593,116.725,100.036)
P: (32.245,114.224,100.832)
C4': (33.737,117.689,99.819)
C2': (35.988,118.032,99.128)
O2': (35.998,119.419,98.853)
N1: (36.724,116.792,101.218)
O4: (38.818,114.067,103.272)
O2: (38.465,118.236,101.584)
C6: (36.250,115.508,101.306)
C5: (36.920,114.534,101.925)
O3': (34.249,117.816,97.441)
N3: (38.629,116.104,102.346)
OP1: (33.058,112.981,100.716)
OP2: (31.759,114.672,102.166)
C2: (37.972,117.122,101.709)
C1': (35.918,117.878,100.645)
C3': (34.706,117.328,98.697)
O5': (33.111,115.402,100.204)
O4': (34.563,117.686,101.007)
C5': (32.593,116.725,100.036)
P: (32.245,114.224,100.832)
C4': (33.737,117.689,99.819)
C2': (35.988,118.032,99.128)
O2': (35.998,119.419,98.853)
N1: (36.724,116.792,101.218)
O4: (38.818,114.067,103.272)
O2: (38.465,118.236,101.584)
C6: (36.250,115.508,101.306)
C5: (36.920,114.534,101.925)
O3': (34.249,117.816,97.441)
OP1: (32.619,117.305,95.643)
OP2: (33.858,115.402,96.817)
C3': (35.216,117.891,92.259)
C1': (35.427,120.217,91.992)
C5': (35.554,118.131,94.828)
O4': (35.254,119.967,93.366)
C8: (37.873,120.414,92.657)
O2': (33.552,119.143,91.020)
C6: (39.458,122.008,89.973)
C5: (38.692,121.373,90.953)
C4: (37.358,121.172,90.670)
P: (33.845,116.784,96.286)
C4': (34.870,118.593,93.568)
C2': (34.937,118.983,91.243)
C2: (37.546,122.093,88.688)
N1: (38.846,122.357,88.823)
N3: (36.714,121.514,89.541)
N6: (40.749,122.293,90.123)
N7: (39.008,120.885,92.211)
N9: (36.828,120.571,91.783)
O5': (35.036,116.875,95.237)
O3': (34.378,116.770,91.996)
OP2: (33.858,115.402,96.817)
C3': (35.216,117.891,92.259)
C1': (35.427,120.217,91.992)
C5': (35.554,118.131,94.828)
O4': (35.254,119.967,93.366)
C8: (37.873,120.414,92.657)
O2': (33.552,119.143,91.020)
C6: (39.458,122.008,89.973)
C5: (38.692,121.373,90.953)
C4: (37.358,121.172,90.670)
P: (33.845,116.784,96.286)
C4': (34.870,118.593,93.568)
C2': (34.937,118.983,91.243)
C2: (37.546,122.093,88.688)
N1: (38.846,122.357,88.823)
N3: (36.714,121.514,89.541)
N6: (40.749,122.293,90.123)
N7: (39.008,120.885,92.211)
N9: (36.828,120.571,91.783)
O5': (35.036,116.875,95.237)
O3': (34.378,116.770,91.996)
Image (generated by PyMOL):