Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0607:0608
Extra
PDB:
ATOM 1 O3' G A 606 31.107 113.820 99.774 1.00 37.94 O
ATOM 2 P U A 607 32.332 114.075 100.778 1.00 38.01 P
ATOM 3 OP1 U A 607 33.099 112.809 100.775 1.00 35.57 O
ATOM 4 OP2 U A 607 31.867 114.658 102.067 1.00 35.37 O
ATOM 5 O5' U A 607 33.202 115.182 100.033 1.00 37.30 O
ATOM 6 C5' U A 607 32.723 116.527 99.878 1.00 34.48 C
ATOM 7 C4' U A 607 33.889 117.470 99.714 1.00 34.96 C
ATOM 8 O4' U A 607 34.688 117.435 100.921 1.00 35.09 O
ATOM 9 C3' U A 607 34.882 117.130 98.609 1.00 34.63 C
ATOM 10 O3' U A 607 34.445 117.648 97.357 1.00 32.04 O
ATOM 11 C2' U A 607 36.147 117.839 99.082 1.00 35.52 C
ATOM 12 O2' U A 607 36.119 119.233 98.847 1.00 35.74 O
ATOM 13 C1' U A 607 36.048 117.654 100.594 1.00 35.24 C
ATOM 14 N1 U A 607 36.865 116.582 101.181 1.00 34.14 N
ATOM 15 C2 U A 607 38.127 116.922 101.633 1.00 35.12 C
ATOM 16 O2 U A 607 38.613 118.036 101.480 1.00 35.93 O
ATOM 17 N3 U A 607 38.801 115.916 102.270 1.00 34.86 N
ATOM 18 C4 U A 607 38.363 114.632 102.490 1.00 35.61 C
ATOM 19 O4 U A 607 39.011 113.893 103.237 1.00 35.49 O
ATOM 20 C5 U A 607 37.075 114.345 101.940 1.00 34.70 C
ATOM 21 C6 U A 607 36.391 115.305 101.318 1.00 33.54 C
ATOM 22 P A A 608 34.002 116.646 96.188 1.00 32.63 P
ATOM 23 OP1 A A 608 32.828 117.253 95.521 1.00 32.61 O
ATOM 24 OP2 A A 608 33.904 115.268 96.723 1.00 34.33 O
ATOM 25 O5' A A 608 35.217 116.681 95.163 1.00 32.00 O
TER
ATOM 1 O3' U B 607 34.445 117.648 97.357 1.00 32.04 O
ATOM 2 P A B 608 34.002 116.646 96.188 1.00 32.63 P
ATOM 3 OP1 A B 608 32.828 117.253 95.521 1.00 32.61 O
ATOM 4 OP2 A B 608 33.904 115.268 96.723 1.00 34.33 O
ATOM 5 O5' A B 608 35.217 116.681 95.163 1.00 32.00 O
ATOM 6 C5' A B 608 35.744 117.919 94.704 1.00 26.40 C
ATOM 7 C4' A B 608 35.015 118.373 93.468 1.00 25.40 C
ATOM 8 O4' A B 608 35.352 119.759 93.257 1.00 26.76 O
ATOM 9 C3' A B 608 35.341 117.676 92.154 1.00 25.71 C
ATOM 10 O3' A B 608 34.508 116.546 91.910 1.00 25.65 O
ATOM 11 C2' A B 608 35.043 118.765 91.140 1.00 26.49 C
ATOM 12 O2' A B 608 33.657 118.912 90.929 1.00 25.46 O
ATOM 13 C1' A B 608 35.533 120.003 91.883 1.00 28.04 C
ATOM 14 N9 A B 608 36.943 120.327 91.678 1.00 31.10 N
ATOM 15 C8 A B 608 37.991 120.083 92.533 1.00 31.45 C
ATOM 16 N7 A B 608 39.138 120.544 92.109 1.00 33.35 N
ATOM 17 C5 A B 608 38.829 121.120 90.884 1.00 33.99 C
ATOM 18 C6 A B 608 39.611 121.785 89.941 1.00 33.85 C
ATOM 19 N6 A B 608 40.910 122.009 90.105 1.00 37.85 N
ATOM 20 N1 A B 608 39.009 122.224 88.817 1.00 33.11 N
ATOM 21 C2 A B 608 37.698 122.010 88.670 1.00 33.77 C
ATOM 22 N3 A B 608 36.849 121.406 89.491 1.00 33.34 N
ATOM 23 C4 A B 608 37.486 120.977 90.597 1.00 33.49 C
ATOM 24 P C B 609 35.016 115.363 90.942 1.00 26.85 P
ATOM 25 OP1 C B 609 33.846 114.494 90.661 1.00 28.34 O
ATOM 26 OP2 C B 609 36.234 114.766 91.526 1.00 29.90 O
ATOM 27 O5' C B 609 35.450 116.083 89.589 1.00 27.06 O
TER
ATOM 2 P U A 607 32.332 114.075 100.778 1.00 38.01 P
ATOM 3 OP1 U A 607 33.099 112.809 100.775 1.00 35.57 O
ATOM 4 OP2 U A 607 31.867 114.658 102.067 1.00 35.37 O
ATOM 5 O5' U A 607 33.202 115.182 100.033 1.00 37.30 O
ATOM 6 C5' U A 607 32.723 116.527 99.878 1.00 34.48 C
ATOM 7 C4' U A 607 33.889 117.470 99.714 1.00 34.96 C
ATOM 8 O4' U A 607 34.688 117.435 100.921 1.00 35.09 O
ATOM 9 C3' U A 607 34.882 117.130 98.609 1.00 34.63 C
ATOM 10 O3' U A 607 34.445 117.648 97.357 1.00 32.04 O
ATOM 11 C2' U A 607 36.147 117.839 99.082 1.00 35.52 C
ATOM 12 O2' U A 607 36.119 119.233 98.847 1.00 35.74 O
ATOM 13 C1' U A 607 36.048 117.654 100.594 1.00 35.24 C
ATOM 14 N1 U A 607 36.865 116.582 101.181 1.00 34.14 N
ATOM 15 C2 U A 607 38.127 116.922 101.633 1.00 35.12 C
ATOM 16 O2 U A 607 38.613 118.036 101.480 1.00 35.93 O
ATOM 17 N3 U A 607 38.801 115.916 102.270 1.00 34.86 N
ATOM 18 C4 U A 607 38.363 114.632 102.490 1.00 35.61 C
ATOM 19 O4 U A 607 39.011 113.893 103.237 1.00 35.49 O
ATOM 20 C5 U A 607 37.075 114.345 101.940 1.00 34.70 C
ATOM 21 C6 U A 607 36.391 115.305 101.318 1.00 33.54 C
ATOM 22 P A A 608 34.002 116.646 96.188 1.00 32.63 P
ATOM 23 OP1 A A 608 32.828 117.253 95.521 1.00 32.61 O
ATOM 24 OP2 A A 608 33.904 115.268 96.723 1.00 34.33 O
ATOM 25 O5' A A 608 35.217 116.681 95.163 1.00 32.00 O
TER
ATOM 1 O3' U B 607 34.445 117.648 97.357 1.00 32.04 O
ATOM 2 P A B 608 34.002 116.646 96.188 1.00 32.63 P
ATOM 3 OP1 A B 608 32.828 117.253 95.521 1.00 32.61 O
ATOM 4 OP2 A B 608 33.904 115.268 96.723 1.00 34.33 O
ATOM 5 O5' A B 608 35.217 116.681 95.163 1.00 32.00 O
ATOM 6 C5' A B 608 35.744 117.919 94.704 1.00 26.40 C
ATOM 7 C4' A B 608 35.015 118.373 93.468 1.00 25.40 C
ATOM 8 O4' A B 608 35.352 119.759 93.257 1.00 26.76 O
ATOM 9 C3' A B 608 35.341 117.676 92.154 1.00 25.71 C
ATOM 10 O3' A B 608 34.508 116.546 91.910 1.00 25.65 O
ATOM 11 C2' A B 608 35.043 118.765 91.140 1.00 26.49 C
ATOM 12 O2' A B 608 33.657 118.912 90.929 1.00 25.46 O
ATOM 13 C1' A B 608 35.533 120.003 91.883 1.00 28.04 C
ATOM 14 N9 A B 608 36.943 120.327 91.678 1.00 31.10 N
ATOM 15 C8 A B 608 37.991 120.083 92.533 1.00 31.45 C
ATOM 16 N7 A B 608 39.138 120.544 92.109 1.00 33.35 N
ATOM 17 C5 A B 608 38.829 121.120 90.884 1.00 33.99 C
ATOM 18 C6 A B 608 39.611 121.785 89.941 1.00 33.85 C
ATOM 19 N6 A B 608 40.910 122.009 90.105 1.00 37.85 N
ATOM 20 N1 A B 608 39.009 122.224 88.817 1.00 33.11 N
ATOM 21 C2 A B 608 37.698 122.010 88.670 1.00 33.77 C
ATOM 22 N3 A B 608 36.849 121.406 89.491 1.00 33.34 N
ATOM 23 C4 A B 608 37.486 120.977 90.597 1.00 33.49 C
ATOM 24 P C B 609 35.016 115.363 90.942 1.00 26.85 P
ATOM 25 OP1 C B 609 33.846 114.494 90.661 1.00 28.34 O
ATOM 26 OP2 C B 609 36.234 114.766 91.526 1.00 29.90 O
ATOM 27 O5' C B 609 35.450 116.083 89.589 1.00 27.06 O
TER
Atoms:
C4: (38.363,114.632,102.490)
N3: (38.801,115.916,102.270)
OP1: (33.099,112.809,100.775)
OP2: (31.867,114.658,102.067)
C2: (38.127,116.922,101.633)
C1': (36.048,117.654,100.594)
C3': (34.882,117.130,98.609)
O5': (33.202,115.182,100.033)
O4': (34.688,117.435,100.921)
C5': (32.723,116.527,99.878)
P: (32.332,114.075,100.778)
C4': (33.889,117.470,99.714)
C2': (36.147,117.839,99.082)
O2': (36.119,119.233,98.847)
N1: (36.865,116.582,101.181)
O4: (39.011,113.893,103.237)
O2: (38.613,118.036,101.480)
C6: (36.391,115.305,101.318)
C5: (37.075,114.345,101.940)
O3': (34.445,117.648,97.357)
N3: (38.801,115.916,102.270)
OP1: (33.099,112.809,100.775)
OP2: (31.867,114.658,102.067)
C2: (38.127,116.922,101.633)
C1': (36.048,117.654,100.594)
C3': (34.882,117.130,98.609)
O5': (33.202,115.182,100.033)
O4': (34.688,117.435,100.921)
C5': (32.723,116.527,99.878)
P: (32.332,114.075,100.778)
C4': (33.889,117.470,99.714)
C2': (36.147,117.839,99.082)
O2': (36.119,119.233,98.847)
N1: (36.865,116.582,101.181)
O4: (39.011,113.893,103.237)
O2: (38.613,118.036,101.480)
C6: (36.391,115.305,101.318)
C5: (37.075,114.345,101.940)
O3': (34.445,117.648,97.357)
OP1: (32.828,117.253,95.521)
OP2: (33.904,115.268,96.723)
C3': (35.341,117.676,92.154)
C1': (35.533,120.003,91.883)
C5': (35.744,117.919,94.704)
O4': (35.352,119.759,93.257)
C8: (37.991,120.083,92.533)
O2': (33.657,118.912,90.929)
C6: (39.611,121.785,89.941)
C5: (38.829,121.120,90.884)
C4: (37.486,120.977,90.597)
P: (34.002,116.646,96.188)
C4': (35.015,118.373,93.468)
C2': (35.043,118.765,91.140)
C2: (37.698,122.010,88.670)
N1: (39.009,122.224,88.817)
N3: (36.849,121.406,89.491)
N6: (40.910,122.009,90.105)
N7: (39.138,120.544,92.109)
N9: (36.943,120.327,91.678)
O5': (35.217,116.681,95.163)
O3': (34.508,116.546,91.910)
OP2: (33.904,115.268,96.723)
C3': (35.341,117.676,92.154)
C1': (35.533,120.003,91.883)
C5': (35.744,117.919,94.704)
O4': (35.352,119.759,93.257)
C8: (37.991,120.083,92.533)
O2': (33.657,118.912,90.929)
C6: (39.611,121.785,89.941)
C5: (38.829,121.120,90.884)
C4: (37.486,120.977,90.597)
P: (34.002,116.646,96.188)
C4': (35.015,118.373,93.468)
C2': (35.043,118.765,91.140)
C2: (37.698,122.010,88.670)
N1: (39.009,122.224,88.817)
N3: (36.849,121.406,89.491)
N6: (40.910,122.009,90.105)
N7: (39.138,120.544,92.109)
N9: (36.943,120.327,91.678)
O5': (35.217,116.681,95.163)
O3': (34.508,116.546,91.910)
Image (generated by PyMOL):