ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:0607:0608

Extra

PDB:
ATOM 1 O3' G A 606 31.251 114.188 100.088 1.00 44.95 O
ATOM 2 P U A 607 32.447 114.470 101.123 1.00 45.51 P
ATOM 3 OP1 U A 607 33.244 113.223 101.146 1.00 43.18 O
ATOM 4 OP2 U A 607 31.917 115.029 102.391 1.00 44.54 O
ATOM 5 O5' U A 607 33.315 115.601 100.410 1.00 45.44 O
ATOM 6 C5' U A 607 32.839 116.958 100.269 1.00 42.99 C
ATOM 7 C4' U A 607 34.005 117.891 100.034 1.00 42.13 C
ATOM 8 O4' U A 607 34.836 117.902 101.217 1.00 43.86 O
ATOM 9 C3' U A 607 34.956 117.468 98.922 1.00 43.45 C
ATOM 10 O3' U A 607 34.499 117.945 97.666 1.00 43.01 O
ATOM 11 C2' U A 607 36.272 118.124 99.324 1.00 43.02 C
ATOM 12 O2' U A 607 36.337 119.496 99.006 1.00 40.42 O
ATOM 13 C1' U A 607 36.202 118.026 100.845 1.00 43.42 C
ATOM 14 N1 U A 607 36.978 116.944 101.474 1.00 42.45 N
ATOM 15 C2 U A 607 38.216 117.270 102.000 1.00 42.48 C
ATOM 16 O2 U A 607 38.713 118.383 101.894 1.00 41.64 O
ATOM 17 N3 U A 607 38.852 116.249 102.656 1.00 42.13 N
ATOM 18 C4 U A 607 38.397 114.963 102.831 1.00 42.58 C
ATOM 19 O4 U A 607 39.057 114.170 103.507 1.00 40.63 O
ATOM 20 C5 U A 607 37.134 114.696 102.225 1.00 43.12 C
ATOM 21 C6 U A 607 36.487 115.670 101.577 1.00 42.26 C
ATOM 22 P A A 608 34.091 116.908 96.524 1.00 42.37 P
ATOM 23 OP1 A A 608 32.903 117.461 95.833 1.00 43.12 O
ATOM 24 OP2 A A 608 34.045 115.538 97.102 1.00 42.27 O
ATOM 25 O5' A A 608 35.294 116.967 95.489 1.00 43.88 O
TER

ATOM 1 O3' U B 607 34.499 117.945 97.666 1.00 43.01 O
ATOM 2 P A B 608 34.091 116.908 96.524 1.00 42.37 P
ATOM 3 OP1 A B 608 32.903 117.461 95.833 1.00 43.12 O
ATOM 4 OP2 A B 608 34.045 115.538 97.102 1.00 42.27 O
ATOM 5 O5' A B 608 35.294 116.967 95.489 1.00 43.88 O
ATOM 6 C5' A B 608 35.843 118.215 95.071 1.00 39.66 C
ATOM 7 C4' A B 608 35.142 118.719 93.836 1.00 37.02 C
ATOM 8 O4' A B 608 35.585 120.079 93.650 1.00 38.82 O
ATOM 9 C3' A B 608 35.430 118.039 92.504 1.00 35.90 C
ATOM 10 O3' A B 608 34.581 116.915 92.245 1.00 34.55 O
ATOM 11 C2' A B 608 35.154 119.164 91.518 1.00 36.86 C
ATOM 12 O2' A B 608 33.779 119.398 91.328 1.00 36.50 O
ATOM 13 C1' A B 608 35.694 120.369 92.277 1.00 38.06 C
ATOM 14 N9 A B 608 37.085 120.725 92.012 1.00 41.11 N
ATOM 15 C8 A B 608 38.157 120.535 92.849 1.00 41.63 C
ATOM 16 N7 A B 608 39.276 121.026 92.390 1.00 43.29 N
ATOM 17 C5 A B 608 38.925 121.561 91.159 1.00 43.24 C
ATOM 18 C6 A B 608 39.667 122.233 90.184 1.00 43.37 C
ATOM 19 N6 A B 608 40.963 122.501 90.313 1.00 45.84 N
ATOM 20 N1 A B 608 39.027 122.629 89.064 1.00 42.55 N
ATOM 21 C2 A B 608 37.723 122.362 88.949 1.00 41.87 C
ATOM 22 N3 A B 608 36.914 121.741 89.799 1.00 41.76 N
ATOM 23 C4 A B 608 37.585 121.362 90.902 1.00 42.20 C
ATOM 24 P C B 609 35.069 115.741 91.243 1.00 36.07 P
ATOM 25 OP1 C B 609 33.890 114.899 90.914 1.00 36.58 O
ATOM 26 OP2 C B 609 36.281 115.096 91.807 1.00 36.28 O
ATOM 27 O5' C B 609 35.515 116.492 89.910 1.00 34.94 O
TER

Atoms:
C4: (38.397,114.963,102.831)
N3: (38.852,116.249,102.656)
OP1: (33.244,113.223,101.146)
OP2: (31.917,115.029,102.391)
C2: (38.216,117.270,102.000)
C1': (36.202,118.026,100.845)
C3': (34.956,117.468,98.922)
O5': (33.315,115.601,100.410)
O4': (34.836,117.902,101.217)
C5': (32.839,116.958,100.269)
P: (32.447,114.470,101.123)
C4': (34.005,117.891,100.034)
C2': (36.272,118.124,99.324)
O2': (36.337,119.496,99.006)
N1: (36.978,116.944,101.474)
O4: (39.057,114.170,103.507)
O2: (38.713,118.383,101.894)
C6: (36.487,115.670,101.577)
C5: (37.134,114.696,102.225)
O3': (34.499,117.945,97.666)
OP1: (32.903,117.461,95.833)
OP2: (34.045,115.538,97.102)
C3': (35.430,118.039,92.504)
C1': (35.694,120.369,92.277)
C5': (35.843,118.215,95.071)
O4': (35.585,120.079,93.650)
C8: (38.157,120.535,92.849)
O2': (33.779,119.398,91.328)
C6: (39.667,122.233,90.184)
C5: (38.925,121.561,91.159)
C4: (37.585,121.362,90.902)
P: (34.091,116.908,96.524)
C4': (35.142,118.719,93.836)
C2': (35.154,119.164,91.518)
C2: (37.723,122.362,88.949)
N1: (39.027,122.629,89.064)
N3: (36.914,121.741,89.799)
N6: (40.963,122.501,90.313)
N7: (39.276,121.026,92.390)
N9: (37.085,120.725,92.012)
O5': (35.294,116.967,95.489)
O3': (34.581,116.915,92.245)
Image (generated by PyMOL):
PyMOL image
show in jmol