Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0607:0608
Extra
PDB:
ATOM 1 O3' G A 606 31.108 113.928 99.806 1.00 40.93 O
ATOM 2 P U A 607 32.264 114.241 100.865 1.00 42.30 P
ATOM 3 OP1 U A 607 33.050 112.997 101.010 1.00 41.85 O
ATOM 4 OP2 U A 607 31.659 114.880 102.069 1.00 43.01 O
ATOM 5 O5' U A 607 33.152 115.348 100.146 1.00 42.25 O
ATOM 6 C5' U A 607 32.648 116.680 99.940 1.00 41.48 C
ATOM 7 C4' U A 607 33.792 117.644 99.734 1.00 42.39 C
ATOM 8 O4' U A 607 34.595 117.696 100.937 1.00 44.00 O
ATOM 9 C3' U A 607 34.785 117.284 98.638 1.00 41.21 C
ATOM 10 O3' U A 607 34.320 117.733 97.375 1.00 37.96 O
ATOM 11 C2' U A 607 36.035 118.038 99.069 1.00 43.72 C
ATOM 12 O2' U A 607 35.987 119.418 98.770 1.00 44.64 O
ATOM 13 C1' U A 607 35.954 117.907 100.588 1.00 44.57 C
ATOM 14 N1 U A 607 36.772 116.827 101.157 1.00 43.65 N
ATOM 15 C2 U A 607 38.040 117.160 101.578 1.00 44.01 C
ATOM 16 O2 U A 607 38.512 118.278 101.438 1.00 44.10 O
ATOM 17 N3 U A 607 38.741 116.139 102.165 1.00 44.99 N
ATOM 18 C4 U A 607 38.318 114.845 102.361 1.00 45.21 C
ATOM 19 O4 U A 607 39.039 114.061 102.981 1.00 45.24 O
ATOM 20 C5 U A 607 37.007 114.568 101.864 1.00 44.97 C
ATOM 21 C6 U A 607 36.297 115.544 101.291 1.00 44.03 C
ATOM 22 P A A 608 33.961 116.668 96.238 1.00 37.57 P
ATOM 23 OP1 A A 608 32.723 117.112 95.558 1.00 36.67 O
ATOM 24 OP2 A A 608 34.026 115.308 96.823 1.00 38.26 O
ATOM 25 O5' A A 608 35.154 116.806 95.200 1.00 36.27 O
TER
ATOM 1 O3' U B 607 34.320 117.733 97.375 1.00 37.96 O
ATOM 2 P A B 608 33.961 116.668 96.238 1.00 37.57 P
ATOM 3 OP1 A B 608 32.723 117.112 95.558 1.00 36.67 O
ATOM 4 OP2 A B 608 34.026 115.308 96.823 1.00 38.26 O
ATOM 5 O5' A B 608 35.154 116.806 95.200 1.00 36.27 O
ATOM 6 C5' A B 608 35.590 118.086 94.767 1.00 30.98 C
ATOM 7 C4' A B 608 34.886 118.488 93.493 1.00 28.73 C
ATOM 8 O4' A B 608 35.234 119.870 93.269 1.00 29.38 O
ATOM 9 C3' A B 608 35.272 117.776 92.201 1.00 27.42 C
ATOM 10 O3' A B 608 34.459 116.637 91.930 1.00 28.24 O
ATOM 11 C2' A B 608 34.989 118.841 91.163 1.00 27.91 C
ATOM 12 O2' A B 608 33.607 118.936 90.925 1.00 28.03 O
ATOM 13 C1' A B 608 35.426 120.105 91.897 1.00 28.87 C
ATOM 14 N9 A B 608 36.822 120.494 91.709 1.00 30.73 N
ATOM 15 C8 A B 608 37.862 120.333 92.591 1.00 30.22 C
ATOM 16 N7 A B 608 39.001 120.811 92.158 1.00 31.21 N
ATOM 17 C5 A B 608 38.694 121.316 90.905 1.00 32.24 C
ATOM 18 C6 A B 608 39.471 121.949 89.933 1.00 32.61 C
ATOM 19 N6 A B 608 40.765 122.201 90.086 1.00 35.01 N
ATOM 20 N1 A B 608 38.868 122.319 88.784 1.00 33.33 N
ATOM 21 C2 A B 608 37.565 122.062 88.636 1.00 33.49 C
ATOM 22 N3 A B 608 36.723 121.475 89.478 1.00 32.82 N
ATOM 23 C4 A B 608 37.358 121.120 90.610 1.00 32.43 C
ATOM 24 P C B 609 34.988 115.482 90.932 1.00 31.82 P
ATOM 25 OP1 C B 609 33.849 114.588 90.608 1.00 30.79 O
ATOM 26 OP2 C B 609 36.223 114.897 91.507 1.00 32.60 O
ATOM 27 O5' C B 609 35.399 116.251 89.599 1.00 31.17 O
TER
ATOM 2 P U A 607 32.264 114.241 100.865 1.00 42.30 P
ATOM 3 OP1 U A 607 33.050 112.997 101.010 1.00 41.85 O
ATOM 4 OP2 U A 607 31.659 114.880 102.069 1.00 43.01 O
ATOM 5 O5' U A 607 33.152 115.348 100.146 1.00 42.25 O
ATOM 6 C5' U A 607 32.648 116.680 99.940 1.00 41.48 C
ATOM 7 C4' U A 607 33.792 117.644 99.734 1.00 42.39 C
ATOM 8 O4' U A 607 34.595 117.696 100.937 1.00 44.00 O
ATOM 9 C3' U A 607 34.785 117.284 98.638 1.00 41.21 C
ATOM 10 O3' U A 607 34.320 117.733 97.375 1.00 37.96 O
ATOM 11 C2' U A 607 36.035 118.038 99.069 1.00 43.72 C
ATOM 12 O2' U A 607 35.987 119.418 98.770 1.00 44.64 O
ATOM 13 C1' U A 607 35.954 117.907 100.588 1.00 44.57 C
ATOM 14 N1 U A 607 36.772 116.827 101.157 1.00 43.65 N
ATOM 15 C2 U A 607 38.040 117.160 101.578 1.00 44.01 C
ATOM 16 O2 U A 607 38.512 118.278 101.438 1.00 44.10 O
ATOM 17 N3 U A 607 38.741 116.139 102.165 1.00 44.99 N
ATOM 18 C4 U A 607 38.318 114.845 102.361 1.00 45.21 C
ATOM 19 O4 U A 607 39.039 114.061 102.981 1.00 45.24 O
ATOM 20 C5 U A 607 37.007 114.568 101.864 1.00 44.97 C
ATOM 21 C6 U A 607 36.297 115.544 101.291 1.00 44.03 C
ATOM 22 P A A 608 33.961 116.668 96.238 1.00 37.57 P
ATOM 23 OP1 A A 608 32.723 117.112 95.558 1.00 36.67 O
ATOM 24 OP2 A A 608 34.026 115.308 96.823 1.00 38.26 O
ATOM 25 O5' A A 608 35.154 116.806 95.200 1.00 36.27 O
TER
ATOM 1 O3' U B 607 34.320 117.733 97.375 1.00 37.96 O
ATOM 2 P A B 608 33.961 116.668 96.238 1.00 37.57 P
ATOM 3 OP1 A B 608 32.723 117.112 95.558 1.00 36.67 O
ATOM 4 OP2 A B 608 34.026 115.308 96.823 1.00 38.26 O
ATOM 5 O5' A B 608 35.154 116.806 95.200 1.00 36.27 O
ATOM 6 C5' A B 608 35.590 118.086 94.767 1.00 30.98 C
ATOM 7 C4' A B 608 34.886 118.488 93.493 1.00 28.73 C
ATOM 8 O4' A B 608 35.234 119.870 93.269 1.00 29.38 O
ATOM 9 C3' A B 608 35.272 117.776 92.201 1.00 27.42 C
ATOM 10 O3' A B 608 34.459 116.637 91.930 1.00 28.24 O
ATOM 11 C2' A B 608 34.989 118.841 91.163 1.00 27.91 C
ATOM 12 O2' A B 608 33.607 118.936 90.925 1.00 28.03 O
ATOM 13 C1' A B 608 35.426 120.105 91.897 1.00 28.87 C
ATOM 14 N9 A B 608 36.822 120.494 91.709 1.00 30.73 N
ATOM 15 C8 A B 608 37.862 120.333 92.591 1.00 30.22 C
ATOM 16 N7 A B 608 39.001 120.811 92.158 1.00 31.21 N
ATOM 17 C5 A B 608 38.694 121.316 90.905 1.00 32.24 C
ATOM 18 C6 A B 608 39.471 121.949 89.933 1.00 32.61 C
ATOM 19 N6 A B 608 40.765 122.201 90.086 1.00 35.01 N
ATOM 20 N1 A B 608 38.868 122.319 88.784 1.00 33.33 N
ATOM 21 C2 A B 608 37.565 122.062 88.636 1.00 33.49 C
ATOM 22 N3 A B 608 36.723 121.475 89.478 1.00 32.82 N
ATOM 23 C4 A B 608 37.358 121.120 90.610 1.00 32.43 C
ATOM 24 P C B 609 34.988 115.482 90.932 1.00 31.82 P
ATOM 25 OP1 C B 609 33.849 114.588 90.608 1.00 30.79 O
ATOM 26 OP2 C B 609 36.223 114.897 91.507 1.00 32.60 O
ATOM 27 O5' C B 609 35.399 116.251 89.599 1.00 31.17 O
TER
Atoms:
C4: (38.318,114.845,102.361)
N3: (38.741,116.139,102.165)
OP1: (33.050,112.997,101.010)
OP2: (31.659,114.880,102.069)
C2: (38.040,117.160,101.578)
C1': (35.954,117.907,100.588)
C3': (34.785,117.284,98.638)
O5': (33.152,115.348,100.146)
O4': (34.595,117.696,100.937)
C5': (32.648,116.680,99.940)
P: (32.264,114.241,100.865)
C4': (33.792,117.644,99.734)
C2': (36.035,118.038,99.069)
O2': (35.987,119.418,98.770)
N1: (36.772,116.827,101.157)
O4: (39.039,114.061,102.981)
O2: (38.512,118.278,101.438)
C6: (36.297,115.544,101.291)
C5: (37.007,114.568,101.864)
O3': (34.320,117.733,97.375)
N3: (38.741,116.139,102.165)
OP1: (33.050,112.997,101.010)
OP2: (31.659,114.880,102.069)
C2: (38.040,117.160,101.578)
C1': (35.954,117.907,100.588)
C3': (34.785,117.284,98.638)
O5': (33.152,115.348,100.146)
O4': (34.595,117.696,100.937)
C5': (32.648,116.680,99.940)
P: (32.264,114.241,100.865)
C4': (33.792,117.644,99.734)
C2': (36.035,118.038,99.069)
O2': (35.987,119.418,98.770)
N1: (36.772,116.827,101.157)
O4: (39.039,114.061,102.981)
O2: (38.512,118.278,101.438)
C6: (36.297,115.544,101.291)
C5: (37.007,114.568,101.864)
O3': (34.320,117.733,97.375)
OP1: (32.723,117.112,95.558)
OP2: (34.026,115.308,96.823)
C3': (35.272,117.776,92.201)
C1': (35.426,120.105,91.897)
C5': (35.590,118.086,94.767)
O4': (35.234,119.870,93.269)
C8: (37.862,120.333,92.591)
O2': (33.607,118.936,90.925)
C6: (39.471,121.949,89.933)
C5: (38.694,121.316,90.905)
C4: (37.358,121.120,90.610)
P: (33.961,116.668,96.238)
C4': (34.886,118.488,93.493)
C2': (34.989,118.841,91.163)
C2: (37.565,122.062,88.636)
N1: (38.868,122.319,88.784)
N3: (36.723,121.475,89.478)
N6: (40.765,122.201,90.086)
N7: (39.001,120.811,92.158)
N9: (36.822,120.494,91.709)
O5': (35.154,116.806,95.200)
O3': (34.459,116.637,91.930)
OP2: (34.026,115.308,96.823)
C3': (35.272,117.776,92.201)
C1': (35.426,120.105,91.897)
C5': (35.590,118.086,94.767)
O4': (35.234,119.870,93.269)
C8: (37.862,120.333,92.591)
O2': (33.607,118.936,90.925)
C6: (39.471,121.949,89.933)
C5: (38.694,121.316,90.905)
C4: (37.358,121.120,90.610)
P: (33.961,116.668,96.238)
C4': (34.886,118.488,93.493)
C2': (34.989,118.841,91.163)
C2: (37.565,122.062,88.636)
N1: (38.868,122.319,88.784)
N3: (36.723,121.475,89.478)
N6: (40.765,122.201,90.086)
N7: (39.001,120.811,92.158)
N9: (36.822,120.494,91.709)
O5': (35.154,116.806,95.200)
O3': (34.459,116.637,91.930)
Image (generated by PyMOL):