ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CPW:0607:0608

Extra

PDB:
ATOM 1 O3' G A 606 31.152 113.068 100.040 1.00 47.32 O
ATOM 2 P U A 607 32.354 113.288 101.085 1.00 50.30 P
ATOM 3 OP1 U A 607 33.219 112.078 100.987 1.00 44.46 O
ATOM 4 OP2 U A 607 31.848 113.742 102.422 1.00 45.36 O
ATOM 5 O5' U A 607 33.199 114.474 100.444 1.00 50.39 O
ATOM 6 C5' U A 607 32.692 115.814 100.353 1.00 48.49 C
ATOM 7 C4' U A 607 33.835 116.751 100.049 1.00 49.42 C
ATOM 8 O4' U A 607 34.722 116.799 101.192 1.00 49.24 O
ATOM 9 C3' U A 607 34.720 116.311 98.891 1.00 48.64 C
ATOM 10 O3' U A 607 34.209 116.840 97.682 1.00 47.11 O
ATOM 11 C2' U A 607 36.077 116.923 99.227 1.00 49.59 C
ATOM 12 O2' U A 607 36.189 118.268 98.807 1.00 51.02 O
ATOM 13 C1' U A 607 36.060 116.910 100.756 1.00 48.72 C
ATOM 14 N1 U A 607 36.847 115.859 101.413 1.00 48.95 N
ATOM 15 C2 U A 607 38.074 116.212 101.920 1.00 49.60 C
ATOM 16 O2 U A 607 38.564 117.320 101.762 1.00 51.14 O
ATOM 17 N3 U A 607 38.714 115.223 102.617 1.00 48.99 N
ATOM 18 C4 U A 607 38.270 113.946 102.842 1.00 48.24 C
ATOM 19 O4 U A 607 38.870 113.242 103.651 1.00 48.63 O
ATOM 20 C5 U A 607 37.021 113.638 102.231 1.00 48.13 C
ATOM 21 C6 U A 607 36.367 114.581 101.556 1.00 48.99 C
ATOM 22 P A A 608 33.780 115.851 96.501 1.00 47.46 P
ATOM 23 OP1 A A 608 32.604 116.477 95.843 1.00 46.56 O
ATOM 24 OP2 A A 608 33.685 114.460 97.020 1.00 46.20 O
ATOM 25 O5' A A 608 35.001 115.891 95.478 1.00 47.28 O
TER

ATOM 1 O3' U B 607 34.209 116.840 97.682 1.00 47.11 O
ATOM 2 P A B 608 33.780 115.851 96.501 1.00 47.46 P
ATOM 3 OP1 A B 608 32.604 116.477 95.843 1.00 46.56 O
ATOM 4 OP2 A B 608 33.685 114.460 97.020 1.00 46.20 O
ATOM 5 O5' A B 608 35.001 115.891 95.478 1.00 47.28 O
ATOM 6 C5' A B 608 35.533 117.135 95.023 1.00 43.11 C
ATOM 7 C4' A B 608 34.817 117.604 93.777 1.00 40.63 C
ATOM 8 O4' A B 608 35.203 118.983 93.579 1.00 40.53 O
ATOM 9 C3' A B 608 35.136 116.900 92.457 1.00 40.31 C
ATOM 10 O3' A B 608 34.272 115.785 92.204 1.00 40.28 O
ATOM 11 C2' A B 608 34.890 118.007 91.437 1.00 41.49 C
ATOM 12 O2' A B 608 33.517 118.176 91.133 1.00 38.36 O
ATOM 13 C1' A B 608 35.362 119.245 92.202 1.00 41.41 C
ATOM 14 N9 A B 608 36.764 119.595 91.980 1.00 41.45 N
ATOM 15 C8 A B 608 37.826 119.392 92.828 1.00 41.24 C
ATOM 16 N7 A B 608 38.964 119.838 92.364 1.00 42.08 N
ATOM 17 C5 A B 608 38.634 120.364 91.125 1.00 43.39 C
ATOM 18 C6 A B 608 39.398 120.994 90.136 1.00 44.38 C
ATOM 19 N6 A B 608 40.707 121.200 90.245 1.00 46.86 N
ATOM 20 N1 A B 608 38.764 121.411 89.016 1.00 44.14 N
ATOM 21 C2 A B 608 37.450 121.199 88.910 1.00 43.74 C
ATOM 22 N3 A B 608 36.622 120.614 89.770 1.00 44.55 N
ATOM 23 C4 A B 608 37.284 120.216 90.872 1.00 43.68 C
ATOM 24 P C B 609 34.734 114.599 91.205 1.00 39.01 P
ATOM 25 OP1 C B 609 33.531 113.793 90.873 1.00 40.41 O
ATOM 26 OP2 C B 609 35.909 113.924 91.791 1.00 42.16 O
ATOM 27 O5' C B 609 35.194 115.340 89.876 1.00 37.52 O
TER

Atoms:
C4: (38.270,113.946,102.842)
N3: (38.714,115.223,102.617)
OP1: (33.219,112.078,100.987)
OP2: (31.848,113.742,102.422)
C2: (38.074,116.212,101.920)
C1': (36.060,116.910,100.756)
C3': (34.720,116.311,98.891)
O5': (33.199,114.474,100.444)
O4': (34.722,116.799,101.192)
C5': (32.692,115.814,100.353)
P: (32.354,113.288,101.085)
C4': (33.835,116.751,100.049)
C2': (36.077,116.923,99.227)
O2': (36.189,118.268,98.807)
N1: (36.847,115.859,101.413)
O4: (38.870,113.242,103.651)
O2: (38.564,117.320,101.762)
C6: (36.367,114.581,101.556)
C5: (37.021,113.638,102.231)
O3': (34.209,116.840,97.682)
OP1: (32.604,116.477,95.843)
OP2: (33.685,114.460,97.020)
C3': (35.136,116.900,92.457)
C1': (35.362,119.245,92.202)
C5': (35.533,117.135,95.023)
O4': (35.203,118.983,93.579)
C8: (37.826,119.392,92.828)
O2': (33.517,118.176,91.133)
C6: (39.398,120.994,90.136)
C5: (38.634,120.364,91.125)
C4: (37.284,120.216,90.872)
P: (33.780,115.851,96.501)
C4': (34.817,117.604,93.777)
C2': (34.890,118.007,91.437)
C2: (37.450,121.199,88.910)
N1: (38.764,121.411,89.016)
N3: (36.622,120.614,89.770)
N6: (40.707,121.200,90.245)
N7: (38.964,119.838,92.364)
N9: (36.764,119.595,91.980)
O5': (35.001,115.891,95.478)
O3': (34.272,115.785,92.204)
Image (generated by PyMOL):
PyMOL image
show in jmol