Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A561:A562
Extra
PDB:
ATOM 1 O3' G A 560 -61.181 127.229 194.990 1.00 0.01 O
ATOM 2 P U A 561 -60.697 126.263 193.800 1.00 0.01 P
ATOM 3 OP1 U A 561 -61.766 126.234 192.796 1.00 0.01 O
ATOM 4 OP2 U A 561 -60.272 125.007 194.420 1.00 0.01 O
ATOM 5 O5' U A 561 -59.448 127.019 193.232 1.00 0.01 O
ATOM 6 C5' U A 561 -58.265 127.115 193.991 1.00 0.01 C
ATOM 7 C4' U A 561 -57.103 126.973 193.096 1.00 0.01 C
ATOM 8 O4' U A 561 -57.349 125.860 192.245 1.00 0.01 O
ATOM 9 C3' U A 561 -56.904 128.120 192.148 1.00 0.01 C
ATOM 10 O3' U A 561 -56.108 129.128 192.711 1.00 0.01 O
ATOM 11 C2' U A 561 -56.267 127.479 190.953 1.00 0.01 C
ATOM 12 O2' U A 561 -54.890 127.359 191.176 1.00 0.01 O
ATOM 13 C1' U A 561 -56.858 126.097 190.974 1.00 0.01 C
ATOM 14 N1 U A 561 -57.949 125.899 190.019 1.00 0.01 N
ATOM 15 C2 U A 561 -57.607 124.997 189.088 1.00 0.01 C
ATOM 16 O2 U A 561 -56.497 124.566 189.114 1.00 0.01 O
ATOM 17 N3 U A 561 -58.534 124.662 188.176 1.00 0.01 N
ATOM 18 C4 U A 561 -59.783 125.140 188.144 1.00 0.01 C
ATOM 19 O4 U A 561 -60.459 124.731 187.251 1.00 0.01 O
ATOM 20 C5 U A 561 -60.152 126.064 189.145 1.00 0.01 C
ATOM 21 C6 U A 561 -59.229 126.390 190.062 1.00 0.01 C
ATOM 22 P A A 562 -56.603 130.636 192.697 1.00 0.01 P
ATOM 23 OP1 A A 562 -57.556 130.801 193.834 1.00 0.01 O
ATOM 24 OP2 A A 562 -57.077 130.910 191.322 1.00 0.01 O
ATOM 25 O5' A A 562 -55.269 131.415 192.992 1.00 0.01 O
TER
ATOM 1 O3' U B 561 -56.108 129.128 192.711 1.00 0.01 O
ATOM 2 P A B 562 -56.603 130.636 192.697 1.00 0.01 P
ATOM 3 OP1 A B 562 -57.556 130.801 193.834 1.00 0.01 O
ATOM 4 OP2 A B 562 -57.077 130.910 191.322 1.00 0.01 O
ATOM 5 O5' A B 562 -55.269 131.415 192.992 1.00 0.01 O
ATOM 6 C5' A B 562 -54.065 130.974 192.419 1.00 0.01 C
ATOM 7 C4' A B 562 -52.923 131.864 192.786 1.00 0.01 C
ATOM 8 O4' A B 562 -51.693 131.238 192.370 1.00 0.01 O
ATOM 9 C3' A B 562 -52.875 133.213 192.097 1.00 0.01 C
ATOM 10 O3' A B 562 -53.766 134.167 192.660 1.00 0.01 O
ATOM 11 C2' A B 562 -51.414 133.582 192.249 1.00 0.01 C
ATOM 12 O2' A B 562 -51.156 134.062 193.550 1.00 0.01 O
ATOM 13 C1' A B 562 -50.735 132.223 192.109 1.00 0.01 C
ATOM 14 N9 A B 562 -50.149 132.002 190.771 1.00 0.01 N
ATOM 15 C8 A B 562 -50.424 131.107 189.797 1.00 0.01 C
ATOM 16 N7 A B 562 -49.640 131.201 188.749 1.00 0.01 N
ATOM 17 C5 A B 562 -48.777 132.213 189.087 1.00 0.01 C
ATOM 18 C6 A B 562 -47.697 132.824 188.423 1.00 0.01 C
ATOM 19 N6 A B 562 -47.245 132.504 187.214 1.00 0.01 N
ATOM 20 N1 A B 562 -47.068 133.831 189.061 1.00 0.01 N
ATOM 21 C2 A B 562 -47.474 134.189 190.283 1.00 0.01 C
ATOM 22 N3 A B 562 -48.457 133.688 190.988 1.00 0.01 N
ATOM 23 C4 A B 562 -49.078 132.704 190.325 1.00 0.01 C
ATOM 24 P C B 563 -54.563 135.204 191.716 1.00 0.01 P
ATOM 25 OP1 C B 563 -55.539 135.907 192.570 1.00 0.01 O
ATOM 26 OP2 C B 563 -55.054 134.450 190.543 1.00 0.01 O
ATOM 27 O5' C B 563 -53.425 136.200 191.275 1.00 0.01 O
TER
ATOM 2 P U A 561 -60.697 126.263 193.800 1.00 0.01 P
ATOM 3 OP1 U A 561 -61.766 126.234 192.796 1.00 0.01 O
ATOM 4 OP2 U A 561 -60.272 125.007 194.420 1.00 0.01 O
ATOM 5 O5' U A 561 -59.448 127.019 193.232 1.00 0.01 O
ATOM 6 C5' U A 561 -58.265 127.115 193.991 1.00 0.01 C
ATOM 7 C4' U A 561 -57.103 126.973 193.096 1.00 0.01 C
ATOM 8 O4' U A 561 -57.349 125.860 192.245 1.00 0.01 O
ATOM 9 C3' U A 561 -56.904 128.120 192.148 1.00 0.01 C
ATOM 10 O3' U A 561 -56.108 129.128 192.711 1.00 0.01 O
ATOM 11 C2' U A 561 -56.267 127.479 190.953 1.00 0.01 C
ATOM 12 O2' U A 561 -54.890 127.359 191.176 1.00 0.01 O
ATOM 13 C1' U A 561 -56.858 126.097 190.974 1.00 0.01 C
ATOM 14 N1 U A 561 -57.949 125.899 190.019 1.00 0.01 N
ATOM 15 C2 U A 561 -57.607 124.997 189.088 1.00 0.01 C
ATOM 16 O2 U A 561 -56.497 124.566 189.114 1.00 0.01 O
ATOM 17 N3 U A 561 -58.534 124.662 188.176 1.00 0.01 N
ATOM 18 C4 U A 561 -59.783 125.140 188.144 1.00 0.01 C
ATOM 19 O4 U A 561 -60.459 124.731 187.251 1.00 0.01 O
ATOM 20 C5 U A 561 -60.152 126.064 189.145 1.00 0.01 C
ATOM 21 C6 U A 561 -59.229 126.390 190.062 1.00 0.01 C
ATOM 22 P A A 562 -56.603 130.636 192.697 1.00 0.01 P
ATOM 23 OP1 A A 562 -57.556 130.801 193.834 1.00 0.01 O
ATOM 24 OP2 A A 562 -57.077 130.910 191.322 1.00 0.01 O
ATOM 25 O5' A A 562 -55.269 131.415 192.992 1.00 0.01 O
TER
ATOM 1 O3' U B 561 -56.108 129.128 192.711 1.00 0.01 O
ATOM 2 P A B 562 -56.603 130.636 192.697 1.00 0.01 P
ATOM 3 OP1 A B 562 -57.556 130.801 193.834 1.00 0.01 O
ATOM 4 OP2 A B 562 -57.077 130.910 191.322 1.00 0.01 O
ATOM 5 O5' A B 562 -55.269 131.415 192.992 1.00 0.01 O
ATOM 6 C5' A B 562 -54.065 130.974 192.419 1.00 0.01 C
ATOM 7 C4' A B 562 -52.923 131.864 192.786 1.00 0.01 C
ATOM 8 O4' A B 562 -51.693 131.238 192.370 1.00 0.01 O
ATOM 9 C3' A B 562 -52.875 133.213 192.097 1.00 0.01 C
ATOM 10 O3' A B 562 -53.766 134.167 192.660 1.00 0.01 O
ATOM 11 C2' A B 562 -51.414 133.582 192.249 1.00 0.01 C
ATOM 12 O2' A B 562 -51.156 134.062 193.550 1.00 0.01 O
ATOM 13 C1' A B 562 -50.735 132.223 192.109 1.00 0.01 C
ATOM 14 N9 A B 562 -50.149 132.002 190.771 1.00 0.01 N
ATOM 15 C8 A B 562 -50.424 131.107 189.797 1.00 0.01 C
ATOM 16 N7 A B 562 -49.640 131.201 188.749 1.00 0.01 N
ATOM 17 C5 A B 562 -48.777 132.213 189.087 1.00 0.01 C
ATOM 18 C6 A B 562 -47.697 132.824 188.423 1.00 0.01 C
ATOM 19 N6 A B 562 -47.245 132.504 187.214 1.00 0.01 N
ATOM 20 N1 A B 562 -47.068 133.831 189.061 1.00 0.01 N
ATOM 21 C2 A B 562 -47.474 134.189 190.283 1.00 0.01 C
ATOM 22 N3 A B 562 -48.457 133.688 190.988 1.00 0.01 N
ATOM 23 C4 A B 562 -49.078 132.704 190.325 1.00 0.01 C
ATOM 24 P C B 563 -54.563 135.204 191.716 1.00 0.01 P
ATOM 25 OP1 C B 563 -55.539 135.907 192.570 1.00 0.01 O
ATOM 26 OP2 C B 563 -55.054 134.450 190.543 1.00 0.01 O
ATOM 27 O5' C B 563 -53.425 136.200 191.275 1.00 0.01 O
TER
Atoms:
C4: (-59.783,125.140,188.144)
N3: (-58.534,124.662,188.176)
OP1: (-61.766,126.234,192.796)
OP2: (-60.272,125.007,194.420)
C2: (-57.607,124.997,189.088)
C1': (-56.858,126.097,190.974)
C3': (-56.904,128.120,192.148)
O5': (-59.448,127.019,193.232)
O4': (-57.349,125.860,192.245)
C5': (-58.265,127.115,193.991)
P: (-60.697,126.263,193.800)
C4': (-57.103,126.973,193.096)
C2': (-56.267,127.479,190.953)
O2': (-54.890,127.359,191.176)
N1: (-57.949,125.899,190.019)
O4: (-60.459,124.731,187.251)
O2: (-56.497,124.566,189.114)
C6: (-59.229,126.390,190.062)
C5: (-60.152,126.064,189.145)
O3': (-56.108,129.128,192.711)
N3: (-58.534,124.662,188.176)
OP1: (-61.766,126.234,192.796)
OP2: (-60.272,125.007,194.420)
C2: (-57.607,124.997,189.088)
C1': (-56.858,126.097,190.974)
C3': (-56.904,128.120,192.148)
O5': (-59.448,127.019,193.232)
O4': (-57.349,125.860,192.245)
C5': (-58.265,127.115,193.991)
P: (-60.697,126.263,193.800)
C4': (-57.103,126.973,193.096)
C2': (-56.267,127.479,190.953)
O2': (-54.890,127.359,191.176)
N1: (-57.949,125.899,190.019)
O4: (-60.459,124.731,187.251)
O2: (-56.497,124.566,189.114)
C6: (-59.229,126.390,190.062)
C5: (-60.152,126.064,189.145)
O3': (-56.108,129.128,192.711)
OP1: (-57.556,130.801,193.834)
OP2: (-57.077,130.910,191.322)
C3': (-52.875,133.213,192.097)
C1': (-50.735,132.223,192.109)
C5': (-54.065,130.974,192.419)
O4': (-51.693,131.238,192.370)
C8: (-50.424,131.107,189.797)
O2': (-51.156,134.062,193.550)
C6: (-47.697,132.824,188.423)
C5: (-48.777,132.213,189.087)
C4: (-49.078,132.704,190.325)
P: (-56.603,130.636,192.697)
C4': (-52.923,131.864,192.786)
C2': (-51.414,133.582,192.249)
C2: (-47.474,134.189,190.283)
N1: (-47.068,133.831,189.061)
N3: (-48.457,133.688,190.988)
N6: (-47.245,132.504,187.214)
N7: (-49.640,131.201,188.749)
N9: (-50.149,132.002,190.771)
O5': (-55.269,131.415,192.992)
O3': (-53.766,134.167,192.660)
OP2: (-57.077,130.910,191.322)
C3': (-52.875,133.213,192.097)
C1': (-50.735,132.223,192.109)
C5': (-54.065,130.974,192.419)
O4': (-51.693,131.238,192.370)
C8: (-50.424,131.107,189.797)
O2': (-51.156,134.062,193.550)
C6: (-47.697,132.824,188.423)
C5: (-48.777,132.213,189.087)
C4: (-49.078,132.704,190.325)
P: (-56.603,130.636,192.697)
C4': (-52.923,131.864,192.786)
C2': (-51.414,133.582,192.249)
C2: (-47.474,134.189,190.283)
N1: (-47.068,133.831,189.061)
N3: (-48.457,133.688,190.988)
N6: (-47.245,132.504,187.214)
N7: (-49.640,131.201,188.749)
N9: (-50.149,132.002,190.771)
O5': (-55.269,131.415,192.992)
O3': (-53.766,134.167,192.660)
Image (generated by PyMOL):