Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0517:0600
Extra
PDB:
ATOM 1 O3' G A 516 10.438 139.738 94.708 1.00 44.70 O
ATOM 2 P G A 517 10.694 139.854 96.291 1.00 45.93 P
ATOM 3 OP1 G A 517 9.420 139.508 96.970 1.00 46.72 O
ATOM 4 OP2 G A 517 11.347 141.155 96.586 1.00 44.63 O
ATOM 5 O5' G A 517 11.735 138.683 96.587 1.00 44.87 O
ATOM 6 C5' G A 517 11.320 137.308 96.539 1.00 41.23 C
ATOM 7 C4' G A 517 12.502 136.385 96.720 1.00 40.60 C
ATOM 8 O4' G A 517 13.432 136.545 95.613 1.00 41.46 O
ATOM 9 C3' G A 517 13.382 136.621 97.934 1.00 39.71 C
ATOM 10 O3' G A 517 12.829 136.129 99.142 1.00 38.81 O
ATOM 11 C2' G A 517 14.643 135.875 97.534 1.00 39.13 C
ATOM 12 O2' G A 517 14.502 134.476 97.642 1.00 40.34 O
ATOM 13 C1' G A 517 14.754 136.274 96.064 1.00 40.02 C
ATOM 14 N9 G A 517 15.552 137.495 95.959 1.00 40.12 N
ATOM 15 C8 G A 517 15.101 138.793 95.945 1.00 37.79 C
ATOM 16 N7 G A 517 16.068 139.669 95.935 1.00 38.42 N
ATOM 17 C5 G A 517 17.227 138.904 95.920 1.00 38.30 C
ATOM 18 C6 G A 517 18.588 139.298 95.922 1.00 38.72 C
ATOM 19 O6 G A 517 19.056 140.442 95.946 1.00 39.41 O
ATOM 20 N1 G A 517 19.441 138.199 95.902 1.00 37.15 N
ATOM 21 C2 G A 517 19.039 136.888 95.882 1.00 38.61 C
ATOM 22 N2 G A 517 20.016 135.961 95.846 1.00 37.51 N
ATOM 23 N3 G A 517 17.773 136.507 95.891 1.00 38.62 N
ATOM 24 C4 G A 517 16.927 137.561 95.911 1.00 39.21 C
ATOM 25 P C A 518 13.072 136.937 100.512 1.00 39.01 P
ATOM 26 OP1 C A 518 12.194 136.292 101.529 1.00 39.59 O
ATOM 27 OP2 C A 518 12.953 138.390 100.256 1.00 37.47 O
ATOM 28 O5' C A 518 14.584 136.617 100.894 1.00 38.51 O
TER
ATOM 1 O3' U B 599 19.210 132.910 95.355 1.00 38.99 O
ATOM 2 P U B 600 20.049 131.914 96.309 1.00 41.29 P
ATOM 3 OP1 U B 600 21.223 132.704 96.770 1.00 41.97 O
ATOM 4 OP2 U B 600 20.270 130.621 95.618 1.00 37.62 O
ATOM 5 O5' U B 600 19.092 131.665 97.562 1.00 40.00 O
ATOM 6 C5' U B 600 18.867 132.712 98.527 1.00 41.87 C
ATOM 7 C4' U B 600 17.770 132.329 99.493 1.00 42.15 C
ATOM 8 O4' U B 600 16.532 132.099 98.770 1.00 42.15 O
ATOM 9 C3' U B 600 17.969 131.050 100.287 1.00 42.89 C
ATOM 10 O3' U B 600 18.815 131.256 101.408 1.00 43.92 O
ATOM 11 C2' U B 600 16.544 130.718 100.705 1.00 42.48 C
ATOM 12 O2' U B 600 16.104 131.498 101.798 1.00 42.82 O
ATOM 13 C1' U B 600 15.765 131.114 99.447 1.00 41.79 C
ATOM 14 N1 U B 600 15.560 129.970 98.545 1.00 41.41 N
ATOM 15 C2 U B 600 14.439 129.178 98.751 1.00 42.23 C
ATOM 16 O2 U B 600 13.607 129.405 99.620 1.00 41.44 O
ATOM 17 N3 U B 600 14.327 128.106 97.901 1.00 41.74 N
ATOM 18 C4 U B 600 15.192 127.756 96.887 1.00 41.71 C
ATOM 19 O4 U B 600 14.956 126.754 96.210 1.00 40.99 O
ATOM 20 C5 U B 600 16.314 128.631 96.730 1.00 41.03 C
ATOM 21 C6 U B 600 16.455 129.680 97.540 1.00 40.24 C
ATOM 22 P C B 601 19.386 129.992 102.219 1.00 46.77 P
ATOM 23 OP1 C B 601 20.280 130.527 103.278 1.00 46.46 O
ATOM 24 OP2 C B 601 19.901 128.979 101.267 1.00 45.07 O
ATOM 25 O5' C B 601 18.101 129.376 102.928 1.00 47.18 O
TER
ATOM 2 P G A 517 10.694 139.854 96.291 1.00 45.93 P
ATOM 3 OP1 G A 517 9.420 139.508 96.970 1.00 46.72 O
ATOM 4 OP2 G A 517 11.347 141.155 96.586 1.00 44.63 O
ATOM 5 O5' G A 517 11.735 138.683 96.587 1.00 44.87 O
ATOM 6 C5' G A 517 11.320 137.308 96.539 1.00 41.23 C
ATOM 7 C4' G A 517 12.502 136.385 96.720 1.00 40.60 C
ATOM 8 O4' G A 517 13.432 136.545 95.613 1.00 41.46 O
ATOM 9 C3' G A 517 13.382 136.621 97.934 1.00 39.71 C
ATOM 10 O3' G A 517 12.829 136.129 99.142 1.00 38.81 O
ATOM 11 C2' G A 517 14.643 135.875 97.534 1.00 39.13 C
ATOM 12 O2' G A 517 14.502 134.476 97.642 1.00 40.34 O
ATOM 13 C1' G A 517 14.754 136.274 96.064 1.00 40.02 C
ATOM 14 N9 G A 517 15.552 137.495 95.959 1.00 40.12 N
ATOM 15 C8 G A 517 15.101 138.793 95.945 1.00 37.79 C
ATOM 16 N7 G A 517 16.068 139.669 95.935 1.00 38.42 N
ATOM 17 C5 G A 517 17.227 138.904 95.920 1.00 38.30 C
ATOM 18 C6 G A 517 18.588 139.298 95.922 1.00 38.72 C
ATOM 19 O6 G A 517 19.056 140.442 95.946 1.00 39.41 O
ATOM 20 N1 G A 517 19.441 138.199 95.902 1.00 37.15 N
ATOM 21 C2 G A 517 19.039 136.888 95.882 1.00 38.61 C
ATOM 22 N2 G A 517 20.016 135.961 95.846 1.00 37.51 N
ATOM 23 N3 G A 517 17.773 136.507 95.891 1.00 38.62 N
ATOM 24 C4 G A 517 16.927 137.561 95.911 1.00 39.21 C
ATOM 25 P C A 518 13.072 136.937 100.512 1.00 39.01 P
ATOM 26 OP1 C A 518 12.194 136.292 101.529 1.00 39.59 O
ATOM 27 OP2 C A 518 12.953 138.390 100.256 1.00 37.47 O
ATOM 28 O5' C A 518 14.584 136.617 100.894 1.00 38.51 O
TER
ATOM 1 O3' U B 599 19.210 132.910 95.355 1.00 38.99 O
ATOM 2 P U B 600 20.049 131.914 96.309 1.00 41.29 P
ATOM 3 OP1 U B 600 21.223 132.704 96.770 1.00 41.97 O
ATOM 4 OP2 U B 600 20.270 130.621 95.618 1.00 37.62 O
ATOM 5 O5' U B 600 19.092 131.665 97.562 1.00 40.00 O
ATOM 6 C5' U B 600 18.867 132.712 98.527 1.00 41.87 C
ATOM 7 C4' U B 600 17.770 132.329 99.493 1.00 42.15 C
ATOM 8 O4' U B 600 16.532 132.099 98.770 1.00 42.15 O
ATOM 9 C3' U B 600 17.969 131.050 100.287 1.00 42.89 C
ATOM 10 O3' U B 600 18.815 131.256 101.408 1.00 43.92 O
ATOM 11 C2' U B 600 16.544 130.718 100.705 1.00 42.48 C
ATOM 12 O2' U B 600 16.104 131.498 101.798 1.00 42.82 O
ATOM 13 C1' U B 600 15.765 131.114 99.447 1.00 41.79 C
ATOM 14 N1 U B 600 15.560 129.970 98.545 1.00 41.41 N
ATOM 15 C2 U B 600 14.439 129.178 98.751 1.00 42.23 C
ATOM 16 O2 U B 600 13.607 129.405 99.620 1.00 41.44 O
ATOM 17 N3 U B 600 14.327 128.106 97.901 1.00 41.74 N
ATOM 18 C4 U B 600 15.192 127.756 96.887 1.00 41.71 C
ATOM 19 O4 U B 600 14.956 126.754 96.210 1.00 40.99 O
ATOM 20 C5 U B 600 16.314 128.631 96.730 1.00 41.03 C
ATOM 21 C6 U B 600 16.455 129.680 97.540 1.00 40.24 C
ATOM 22 P C B 601 19.386 129.992 102.219 1.00 46.77 P
ATOM 23 OP1 C B 601 20.280 130.527 103.278 1.00 46.46 O
ATOM 24 OP2 C B 601 19.901 128.979 101.267 1.00 45.07 O
ATOM 25 O5' C B 601 18.101 129.376 102.928 1.00 47.18 O
TER
Atoms:
OP1: (9.420,139.508,96.970)
OP2: (11.347,141.155,96.586)
C3': (13.382,136.621,97.934)
C1': (14.754,136.274,96.064)
C5': (11.320,137.308,96.539)
O6: (19.056,140.442,95.946)
O4': (13.432,136.545,95.613)
C8: (15.101,138.793,95.945)
C2: (19.039,136.888,95.882)
C6: (18.588,139.298,95.922)
C5: (17.227,138.904,95.920)
C4: (16.927,137.561,95.911)
P: (10.694,139.854,96.291)
C4': (12.502,136.385,96.720)
C2': (14.643,135.875,97.534)
O2': (14.502,134.476,97.642)
N1: (19.441,138.199,95.902)
N2: (20.016,135.961,95.846)
N3: (17.773,136.507,95.891)
N7: (16.068,139.669,95.935)
N9: (15.552,137.495,95.959)
O5': (11.735,138.683,96.587)
O3': (12.829,136.129,99.142)
OP2: (11.347,141.155,96.586)
C3': (13.382,136.621,97.934)
C1': (14.754,136.274,96.064)
C5': (11.320,137.308,96.539)
O6: (19.056,140.442,95.946)
O4': (13.432,136.545,95.613)
C8: (15.101,138.793,95.945)
C2: (19.039,136.888,95.882)
C6: (18.588,139.298,95.922)
C5: (17.227,138.904,95.920)
C4: (16.927,137.561,95.911)
P: (10.694,139.854,96.291)
C4': (12.502,136.385,96.720)
C2': (14.643,135.875,97.534)
O2': (14.502,134.476,97.642)
N1: (19.441,138.199,95.902)
N2: (20.016,135.961,95.846)
N3: (17.773,136.507,95.891)
N7: (16.068,139.669,95.935)
N9: (15.552,137.495,95.959)
O5': (11.735,138.683,96.587)
O3': (12.829,136.129,99.142)
C4: (15.192,127.756,96.887)
N3: (14.327,128.106,97.901)
OP1: (21.223,132.704,96.770)
OP2: (20.270,130.621,95.618)
C2: (14.439,129.178,98.751)
C1': (15.765,131.114,99.447)
C3': (17.969,131.050,100.287)
O5': (19.092,131.665,97.562)
O4': (16.532,132.099,98.770)
C5': (18.867,132.712,98.527)
P: (20.049,131.914,96.309)
C4': (17.770,132.329,99.493)
C2': (16.544,130.718,100.705)
O2': (16.104,131.498,101.798)
N1: (15.560,129.970,98.545)
O4: (14.956,126.754,96.210)
O2: (13.607,129.405,99.620)
C6: (16.455,129.680,97.540)
C5: (16.314,128.631,96.730)
O3': (18.815,131.256,101.408)
N3: (14.327,128.106,97.901)
OP1: (21.223,132.704,96.770)
OP2: (20.270,130.621,95.618)
C2: (14.439,129.178,98.751)
C1': (15.765,131.114,99.447)
C3': (17.969,131.050,100.287)
O5': (19.092,131.665,97.562)
O4': (16.532,132.099,98.770)
C5': (18.867,132.712,98.527)
P: (20.049,131.914,96.309)
C4': (17.770,132.329,99.493)
C2': (16.544,130.718,100.705)
O2': (16.104,131.498,101.798)
N1: (15.560,129.970,98.545)
O4: (14.956,126.754,96.210)
O2: (13.607,129.405,99.620)
C6: (16.455,129.680,97.540)
C5: (16.314,128.631,96.730)
O3': (18.815,131.256,101.408)
Image (generated by PyMOL):