Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0517:0600
Extra
PDB:
ATOM 1 O3' G A 516 10.444 140.287 94.636 1.00 56.80 O
ATOM 2 P G A 517 10.687 140.475 96.219 1.00 58.81 P
ATOM 3 OP1 G A 517 9.397 140.178 96.892 1.00 58.74 O
ATOM 4 OP2 G A 517 11.356 141.779 96.473 1.00 56.75 O
ATOM 5 O5' G A 517 11.721 139.317 96.583 1.00 56.94 O
ATOM 6 C5' G A 517 11.331 137.937 96.525 1.00 52.95 C
ATOM 7 C4' G A 517 12.537 137.036 96.669 1.00 52.33 C
ATOM 8 O4' G A 517 13.449 137.236 95.554 1.00 51.86 O
ATOM 9 C3' G A 517 13.437 137.254 97.874 1.00 50.55 C
ATOM 10 O3' G A 517 12.899 136.724 99.074 1.00 50.09 O
ATOM 11 C2' G A 517 14.691 136.518 97.435 1.00 49.97 C
ATOM 12 O2' G A 517 14.560 135.114 97.490 1.00 50.27 O
ATOM 13 C1' G A 517 14.778 136.953 95.974 1.00 50.69 C
ATOM 14 N9 G A 517 15.575 138.175 95.897 1.00 50.81 N
ATOM 15 C8 G A 517 15.126 139.472 95.938 1.00 50.40 C
ATOM 16 N7 G A 517 16.095 140.346 95.957 1.00 51.44 N
ATOM 17 C5 G A 517 17.251 139.580 95.904 1.00 50.22 C
ATOM 18 C6 G A 517 18.610 139.970 95.918 1.00 50.47 C
ATOM 19 O6 G A 517 19.082 141.109 95.998 1.00 52.02 O
ATOM 20 N1 G A 517 19.458 138.873 95.837 1.00 49.99 N
ATOM 21 C2 G A 517 19.051 137.565 95.758 1.00 50.30 C
ATOM 22 N2 G A 517 20.018 136.639 95.670 1.00 49.94 N
ATOM 23 N3 G A 517 17.787 137.190 95.762 1.00 50.16 N
ATOM 24 C4 G A 517 16.947 138.241 95.837 1.00 49.92 C
ATOM 25 P C A 518 13.109 137.514 100.460 1.00 49.17 P
ATOM 26 OP1 C A 518 12.237 136.830 101.457 1.00 48.08 O
ATOM 27 OP2 C A 518 12.962 138.975 100.228 1.00 48.37 O
ATOM 28 O5' C A 518 14.627 137.227 100.841 1.00 48.73 O
TER
ATOM 1 O3' U B 599 19.226 133.570 95.276 1.00 50.05 O
ATOM 2 P U B 600 20.053 132.570 96.229 1.00 50.52 P
ATOM 3 OP1 U B 600 21.212 133.360 96.721 1.00 52.42 O
ATOM 4 OP2 U B 600 20.293 131.283 95.534 1.00 48.92 O
ATOM 5 O5' U B 600 19.076 132.304 97.460 1.00 50.73 O
ATOM 6 C5' U B 600 18.868 133.316 98.458 1.00 52.02 C
ATOM 7 C4' U B 600 17.763 132.912 99.407 1.00 53.76 C
ATOM 8 O4' U B 600 16.530 132.696 98.668 1.00 53.03 O
ATOM 9 C3' U B 600 17.954 131.614 100.174 1.00 53.97 C
ATOM 10 O3' U B 600 18.799 131.789 101.304 1.00 54.54 O
ATOM 11 C2' U B 600 16.523 131.279 100.577 1.00 53.27 C
ATOM 12 O2' U B 600 16.069 132.038 101.679 1.00 53.40 O
ATOM 13 C1' U B 600 15.756 131.703 99.322 1.00 53.00 C
ATOM 14 N1 U B 600 15.557 130.574 98.405 1.00 52.90 N
ATOM 15 C2 U B 600 14.417 129.813 98.574 1.00 53.84 C
ATOM 16 O2 U B 600 13.569 130.064 99.416 1.00 54.84 O
ATOM 17 N3 U B 600 14.304 128.747 97.721 1.00 54.76 N
ATOM 18 C4 U B 600 15.189 128.378 96.732 1.00 54.80 C
ATOM 19 O4 U B 600 14.934 127.400 96.028 1.00 55.41 O
ATOM 20 C5 U B 600 16.335 129.225 96.612 1.00 53.38 C
ATOM 21 C6 U B 600 16.475 130.267 97.428 1.00 52.36 C
ATOM 22 P C B 601 19.351 130.504 102.098 1.00 56.16 P
ATOM 23 OP1 C B 601 20.257 131.016 103.161 1.00 56.27 O
ATOM 24 OP2 C B 601 19.851 129.495 101.129 1.00 54.00 O
ATOM 25 O5' C B 601 18.056 129.921 102.818 1.00 55.51 O
TER
ATOM 2 P G A 517 10.687 140.475 96.219 1.00 58.81 P
ATOM 3 OP1 G A 517 9.397 140.178 96.892 1.00 58.74 O
ATOM 4 OP2 G A 517 11.356 141.779 96.473 1.00 56.75 O
ATOM 5 O5' G A 517 11.721 139.317 96.583 1.00 56.94 O
ATOM 6 C5' G A 517 11.331 137.937 96.525 1.00 52.95 C
ATOM 7 C4' G A 517 12.537 137.036 96.669 1.00 52.33 C
ATOM 8 O4' G A 517 13.449 137.236 95.554 1.00 51.86 O
ATOM 9 C3' G A 517 13.437 137.254 97.874 1.00 50.55 C
ATOM 10 O3' G A 517 12.899 136.724 99.074 1.00 50.09 O
ATOM 11 C2' G A 517 14.691 136.518 97.435 1.00 49.97 C
ATOM 12 O2' G A 517 14.560 135.114 97.490 1.00 50.27 O
ATOM 13 C1' G A 517 14.778 136.953 95.974 1.00 50.69 C
ATOM 14 N9 G A 517 15.575 138.175 95.897 1.00 50.81 N
ATOM 15 C8 G A 517 15.126 139.472 95.938 1.00 50.40 C
ATOM 16 N7 G A 517 16.095 140.346 95.957 1.00 51.44 N
ATOM 17 C5 G A 517 17.251 139.580 95.904 1.00 50.22 C
ATOM 18 C6 G A 517 18.610 139.970 95.918 1.00 50.47 C
ATOM 19 O6 G A 517 19.082 141.109 95.998 1.00 52.02 O
ATOM 20 N1 G A 517 19.458 138.873 95.837 1.00 49.99 N
ATOM 21 C2 G A 517 19.051 137.565 95.758 1.00 50.30 C
ATOM 22 N2 G A 517 20.018 136.639 95.670 1.00 49.94 N
ATOM 23 N3 G A 517 17.787 137.190 95.762 1.00 50.16 N
ATOM 24 C4 G A 517 16.947 138.241 95.837 1.00 49.92 C
ATOM 25 P C A 518 13.109 137.514 100.460 1.00 49.17 P
ATOM 26 OP1 C A 518 12.237 136.830 101.457 1.00 48.08 O
ATOM 27 OP2 C A 518 12.962 138.975 100.228 1.00 48.37 O
ATOM 28 O5' C A 518 14.627 137.227 100.841 1.00 48.73 O
TER
ATOM 1 O3' U B 599 19.226 133.570 95.276 1.00 50.05 O
ATOM 2 P U B 600 20.053 132.570 96.229 1.00 50.52 P
ATOM 3 OP1 U B 600 21.212 133.360 96.721 1.00 52.42 O
ATOM 4 OP2 U B 600 20.293 131.283 95.534 1.00 48.92 O
ATOM 5 O5' U B 600 19.076 132.304 97.460 1.00 50.73 O
ATOM 6 C5' U B 600 18.868 133.316 98.458 1.00 52.02 C
ATOM 7 C4' U B 600 17.763 132.912 99.407 1.00 53.76 C
ATOM 8 O4' U B 600 16.530 132.696 98.668 1.00 53.03 O
ATOM 9 C3' U B 600 17.954 131.614 100.174 1.00 53.97 C
ATOM 10 O3' U B 600 18.799 131.789 101.304 1.00 54.54 O
ATOM 11 C2' U B 600 16.523 131.279 100.577 1.00 53.27 C
ATOM 12 O2' U B 600 16.069 132.038 101.679 1.00 53.40 O
ATOM 13 C1' U B 600 15.756 131.703 99.322 1.00 53.00 C
ATOM 14 N1 U B 600 15.557 130.574 98.405 1.00 52.90 N
ATOM 15 C2 U B 600 14.417 129.813 98.574 1.00 53.84 C
ATOM 16 O2 U B 600 13.569 130.064 99.416 1.00 54.84 O
ATOM 17 N3 U B 600 14.304 128.747 97.721 1.00 54.76 N
ATOM 18 C4 U B 600 15.189 128.378 96.732 1.00 54.80 C
ATOM 19 O4 U B 600 14.934 127.400 96.028 1.00 55.41 O
ATOM 20 C5 U B 600 16.335 129.225 96.612 1.00 53.38 C
ATOM 21 C6 U B 600 16.475 130.267 97.428 1.00 52.36 C
ATOM 22 P C B 601 19.351 130.504 102.098 1.00 56.16 P
ATOM 23 OP1 C B 601 20.257 131.016 103.161 1.00 56.27 O
ATOM 24 OP2 C B 601 19.851 129.495 101.129 1.00 54.00 O
ATOM 25 O5' C B 601 18.056 129.921 102.818 1.00 55.51 O
TER
Atoms:
OP1: (9.397,140.178,96.892)
OP2: (11.356,141.779,96.473)
C3': (13.437,137.254,97.874)
C1': (14.778,136.953,95.974)
C5': (11.331,137.937,96.525)
O6: (19.082,141.109,95.998)
O4': (13.449,137.236,95.554)
C8: (15.126,139.472,95.938)
C2: (19.051,137.565,95.758)
C6: (18.610,139.970,95.918)
C5: (17.251,139.580,95.904)
C4: (16.947,138.241,95.837)
P: (10.687,140.475,96.219)
C4': (12.537,137.036,96.669)
C2': (14.691,136.518,97.435)
O2': (14.560,135.114,97.490)
N1: (19.458,138.873,95.837)
N2: (20.018,136.639,95.670)
N3: (17.787,137.190,95.762)
N7: (16.095,140.346,95.957)
N9: (15.575,138.175,95.897)
O5': (11.721,139.317,96.583)
O3': (12.899,136.724,99.074)
OP2: (11.356,141.779,96.473)
C3': (13.437,137.254,97.874)
C1': (14.778,136.953,95.974)
C5': (11.331,137.937,96.525)
O6: (19.082,141.109,95.998)
O4': (13.449,137.236,95.554)
C8: (15.126,139.472,95.938)
C2: (19.051,137.565,95.758)
C6: (18.610,139.970,95.918)
C5: (17.251,139.580,95.904)
C4: (16.947,138.241,95.837)
P: (10.687,140.475,96.219)
C4': (12.537,137.036,96.669)
C2': (14.691,136.518,97.435)
O2': (14.560,135.114,97.490)
N1: (19.458,138.873,95.837)
N2: (20.018,136.639,95.670)
N3: (17.787,137.190,95.762)
N7: (16.095,140.346,95.957)
N9: (15.575,138.175,95.897)
O5': (11.721,139.317,96.583)
O3': (12.899,136.724,99.074)
C4: (15.189,128.378,96.732)
N3: (14.304,128.747,97.721)
OP1: (21.212,133.360,96.721)
OP2: (20.293,131.283,95.534)
C2: (14.417,129.813,98.574)
C1': (15.756,131.703,99.322)
C3': (17.954,131.614,100.174)
O5': (19.076,132.304,97.460)
O4': (16.530,132.696,98.668)
C5': (18.868,133.316,98.458)
P: (20.053,132.570,96.229)
C4': (17.763,132.912,99.407)
C2': (16.523,131.279,100.577)
O2': (16.069,132.038,101.679)
N1: (15.557,130.574,98.405)
O4: (14.934,127.400,96.028)
O2: (13.569,130.064,99.416)
C6: (16.475,130.267,97.428)
C5: (16.335,129.225,96.612)
O3': (18.799,131.789,101.304)
N3: (14.304,128.747,97.721)
OP1: (21.212,133.360,96.721)
OP2: (20.293,131.283,95.534)
C2: (14.417,129.813,98.574)
C1': (15.756,131.703,99.322)
C3': (17.954,131.614,100.174)
O5': (19.076,132.304,97.460)
O4': (16.530,132.696,98.668)
C5': (18.868,133.316,98.458)
P: (20.053,132.570,96.229)
C4': (17.763,132.912,99.407)
C2': (16.523,131.279,100.577)
O2': (16.069,132.038,101.679)
N1: (15.557,130.574,98.405)
O4: (14.934,127.400,96.028)
O2: (13.569,130.064,99.416)
C6: (16.475,130.267,97.428)
C5: (16.335,129.225,96.612)
O3': (18.799,131.789,101.304)
Image (generated by PyMOL):