Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02220:02260
Extra
PDB:
ATOM 1 O3' U A2219 81.047 49.000 69.990 1.00 53.73 O
ATOM 2 P G A2220 79.814 49.195 68.971 1.00 56.72 P
ATOM 3 OP1 G A2220 79.538 47.929 68.244 1.00 55.93 O
ATOM 4 OP2 G A2220 80.102 50.432 68.198 1.00 58.68 O
ATOM 5 O5' G A2220 78.575 49.493 69.934 1.00 56.89 O
ATOM 6 C5' G A2220 78.436 50.775 70.570 1.00 55.48 C
ATOM 7 C4' G A2220 77.449 50.719 71.717 1.00 55.44 C
ATOM 8 O4' G A2220 76.085 50.574 71.227 1.00 55.12 O
ATOM 9 C3' G A2220 77.644 49.652 72.789 1.00 53.88 C
ATOM 10 O3' G A2220 77.417 50.239 74.066 1.00 53.51 O
ATOM 11 C2' G A2220 76.524 48.657 72.482 1.00 53.63 C
ATOM 12 O2' G A2220 76.070 47.970 73.630 1.00 55.82 O
ATOM 13 C1' G A2220 75.418 49.581 71.980 1.00 52.73 C
ATOM 14 N9 G A2220 74.433 48.928 71.119 1.00 51.54 N
ATOM 15 C8 G A2220 74.675 48.318 69.911 1.00 50.11 C
ATOM 16 N7 G A2220 73.598 47.836 69.355 1.00 48.26 N
ATOM 17 C5 G A2220 72.580 48.140 70.247 1.00 48.35 C
ATOM 18 C6 G A2220 71.186 47.872 70.174 1.00 48.06 C
ATOM 19 O6 G A2220 70.560 47.298 69.279 1.00 48.08 O
ATOM 20 N1 G A2220 70.510 48.352 71.291 1.00 47.06 N
ATOM 21 C2 G A2220 71.095 49.006 72.341 1.00 48.72 C
ATOM 22 N2 G A2220 70.264 49.388 73.322 1.00 47.33 N
ATOM 23 N3 G A2220 72.398 49.268 72.423 1.00 49.66 N
ATOM 24 C4 G A2220 73.075 48.809 71.346 1.00 49.30 C
ATOM 25 P A A2221 78.627 50.972 74.831 1.00 54.38 P
ATOM 26 OP1 A A2221 79.903 50.287 74.494 1.00 54.83 O
ATOM 27 OP2 A A2221 78.239 51.131 76.257 1.00 55.98 O
ATOM 28 O5' A A2221 78.657 52.424 74.178 1.00 54.55 O
TER
ATOM 1 O3' G B2259 72.780 50.394 76.876 1.00 58.16 O
ATOM 2 P U B2260 71.594 51.483 76.861 1.00 59.79 P
ATOM 3 OP1 U B2260 72.060 52.618 77.701 1.00 60.96 O
ATOM 4 OP2 U B2260 70.305 50.808 77.186 1.00 60.85 O
ATOM 5 O5' U B2260 71.482 51.963 75.346 1.00 60.33 O
ATOM 6 C5' U B2260 72.583 52.600 74.674 1.00 62.22 C
ATOM 7 C4' U B2260 72.064 53.527 73.601 1.00 63.73 C
ATOM 8 O4' U B2260 70.944 52.875 72.965 1.00 64.83 O
ATOM 9 C3' U B2260 71.476 54.856 74.068 1.00 64.79 C
ATOM 10 O3' U B2260 72.546 55.818 74.147 1.00 62.06 O
ATOM 11 C2' U B2260 70.545 55.229 72.908 1.00 68.79 C
ATOM 12 O2' U B2260 71.214 55.914 71.857 1.00 73.61 O
ATOM 13 C1' U B2260 70.123 53.855 72.370 1.00 68.47 C
ATOM 14 N1 U B2260 68.712 53.457 72.501 1.00 70.86 N
ATOM 15 C2 U B2260 67.818 53.919 71.541 1.00 72.14 C
ATOM 16 O2 U B2260 68.141 54.667 70.631 1.00 73.30 O
ATOM 17 N3 U B2260 66.529 53.472 71.685 1.00 73.02 N
ATOM 18 C4 U B2260 66.044 52.638 72.668 1.00 74.74 C
ATOM 19 O4 U B2260 64.856 52.305 72.649 1.00 76.48 O
ATOM 20 C5 U B2260 67.018 52.222 73.632 1.00 74.41 C
ATOM 21 C6 U B2260 68.285 52.637 73.520 1.00 73.12 C
ATOM 22 P G B2261 72.574 56.943 75.302 1.00 59.57 P
ATOM 23 OP1 G B2261 71.322 56.879 76.095 1.00 61.47 O
ATOM 24 OP2 G B2261 72.929 58.203 74.609 1.00 61.51 O
ATOM 25 O5' G B2261 73.807 56.507 76.226 1.00 55.80 O
TER
ATOM 2 P G A2220 79.814 49.195 68.971 1.00 56.72 P
ATOM 3 OP1 G A2220 79.538 47.929 68.244 1.00 55.93 O
ATOM 4 OP2 G A2220 80.102 50.432 68.198 1.00 58.68 O
ATOM 5 O5' G A2220 78.575 49.493 69.934 1.00 56.89 O
ATOM 6 C5' G A2220 78.436 50.775 70.570 1.00 55.48 C
ATOM 7 C4' G A2220 77.449 50.719 71.717 1.00 55.44 C
ATOM 8 O4' G A2220 76.085 50.574 71.227 1.00 55.12 O
ATOM 9 C3' G A2220 77.644 49.652 72.789 1.00 53.88 C
ATOM 10 O3' G A2220 77.417 50.239 74.066 1.00 53.51 O
ATOM 11 C2' G A2220 76.524 48.657 72.482 1.00 53.63 C
ATOM 12 O2' G A2220 76.070 47.970 73.630 1.00 55.82 O
ATOM 13 C1' G A2220 75.418 49.581 71.980 1.00 52.73 C
ATOM 14 N9 G A2220 74.433 48.928 71.119 1.00 51.54 N
ATOM 15 C8 G A2220 74.675 48.318 69.911 1.00 50.11 C
ATOM 16 N7 G A2220 73.598 47.836 69.355 1.00 48.26 N
ATOM 17 C5 G A2220 72.580 48.140 70.247 1.00 48.35 C
ATOM 18 C6 G A2220 71.186 47.872 70.174 1.00 48.06 C
ATOM 19 O6 G A2220 70.560 47.298 69.279 1.00 48.08 O
ATOM 20 N1 G A2220 70.510 48.352 71.291 1.00 47.06 N
ATOM 21 C2 G A2220 71.095 49.006 72.341 1.00 48.72 C
ATOM 22 N2 G A2220 70.264 49.388 73.322 1.00 47.33 N
ATOM 23 N3 G A2220 72.398 49.268 72.423 1.00 49.66 N
ATOM 24 C4 G A2220 73.075 48.809 71.346 1.00 49.30 C
ATOM 25 P A A2221 78.627 50.972 74.831 1.00 54.38 P
ATOM 26 OP1 A A2221 79.903 50.287 74.494 1.00 54.83 O
ATOM 27 OP2 A A2221 78.239 51.131 76.257 1.00 55.98 O
ATOM 28 O5' A A2221 78.657 52.424 74.178 1.00 54.55 O
TER
ATOM 1 O3' G B2259 72.780 50.394 76.876 1.00 58.16 O
ATOM 2 P U B2260 71.594 51.483 76.861 1.00 59.79 P
ATOM 3 OP1 U B2260 72.060 52.618 77.701 1.00 60.96 O
ATOM 4 OP2 U B2260 70.305 50.808 77.186 1.00 60.85 O
ATOM 5 O5' U B2260 71.482 51.963 75.346 1.00 60.33 O
ATOM 6 C5' U B2260 72.583 52.600 74.674 1.00 62.22 C
ATOM 7 C4' U B2260 72.064 53.527 73.601 1.00 63.73 C
ATOM 8 O4' U B2260 70.944 52.875 72.965 1.00 64.83 O
ATOM 9 C3' U B2260 71.476 54.856 74.068 1.00 64.79 C
ATOM 10 O3' U B2260 72.546 55.818 74.147 1.00 62.06 O
ATOM 11 C2' U B2260 70.545 55.229 72.908 1.00 68.79 C
ATOM 12 O2' U B2260 71.214 55.914 71.857 1.00 73.61 O
ATOM 13 C1' U B2260 70.123 53.855 72.370 1.00 68.47 C
ATOM 14 N1 U B2260 68.712 53.457 72.501 1.00 70.86 N
ATOM 15 C2 U B2260 67.818 53.919 71.541 1.00 72.14 C
ATOM 16 O2 U B2260 68.141 54.667 70.631 1.00 73.30 O
ATOM 17 N3 U B2260 66.529 53.472 71.685 1.00 73.02 N
ATOM 18 C4 U B2260 66.044 52.638 72.668 1.00 74.74 C
ATOM 19 O4 U B2260 64.856 52.305 72.649 1.00 76.48 O
ATOM 20 C5 U B2260 67.018 52.222 73.632 1.00 74.41 C
ATOM 21 C6 U B2260 68.285 52.637 73.520 1.00 73.12 C
ATOM 22 P G B2261 72.574 56.943 75.302 1.00 59.57 P
ATOM 23 OP1 G B2261 71.322 56.879 76.095 1.00 61.47 O
ATOM 24 OP2 G B2261 72.929 58.203 74.609 1.00 61.51 O
ATOM 25 O5' G B2261 73.807 56.507 76.226 1.00 55.80 O
TER
Atoms:
OP1: (79.538,47.929,68.244)
OP2: (80.102,50.432,68.198)
C3': (77.644,49.652,72.789)
C1': (75.418,49.581,71.980)
C5': (78.436,50.775,70.570)
O6: (70.560,47.298,69.279)
O4': (76.085,50.574,71.227)
C8: (74.675,48.318,69.911)
C2: (71.095,49.006,72.341)
C6: (71.186,47.872,70.174)
C5: (72.580,48.140,70.247)
C4: (73.075,48.809,71.346)
P: (79.814,49.195,68.971)
C4': (77.449,50.719,71.717)
C2': (76.524,48.657,72.482)
O2': (76.070,47.970,73.630)
N1: (70.510,48.352,71.291)
N2: (70.264,49.388,73.322)
N3: (72.398,49.268,72.423)
N7: (73.598,47.836,69.355)
N9: (74.433,48.928,71.119)
O5': (78.575,49.493,69.934)
O3': (77.417,50.239,74.066)
OP2: (80.102,50.432,68.198)
C3': (77.644,49.652,72.789)
C1': (75.418,49.581,71.980)
C5': (78.436,50.775,70.570)
O6: (70.560,47.298,69.279)
O4': (76.085,50.574,71.227)
C8: (74.675,48.318,69.911)
C2: (71.095,49.006,72.341)
C6: (71.186,47.872,70.174)
C5: (72.580,48.140,70.247)
C4: (73.075,48.809,71.346)
P: (79.814,49.195,68.971)
C4': (77.449,50.719,71.717)
C2': (76.524,48.657,72.482)
O2': (76.070,47.970,73.630)
N1: (70.510,48.352,71.291)
N2: (70.264,49.388,73.322)
N3: (72.398,49.268,72.423)
N7: (73.598,47.836,69.355)
N9: (74.433,48.928,71.119)
O5': (78.575,49.493,69.934)
O3': (77.417,50.239,74.066)
C4: (66.044,52.638,72.668)
N3: (66.529,53.472,71.685)
OP1: (72.060,52.618,77.701)
OP2: (70.305,50.808,77.186)
C2: (67.818,53.919,71.541)
C1': (70.123,53.855,72.370)
C3': (71.476,54.856,74.068)
O5': (71.482,51.963,75.346)
O4': (70.944,52.875,72.965)
C5': (72.583,52.600,74.674)
P: (71.594,51.483,76.861)
C4': (72.064,53.527,73.601)
C2': (70.545,55.229,72.908)
O2': (71.214,55.914,71.857)
N1: (68.712,53.457,72.501)
O4: (64.856,52.305,72.649)
O2: (68.141,54.667,70.631)
C6: (68.285,52.637,73.520)
C5: (67.018,52.222,73.632)
O3': (72.546,55.818,74.147)
N3: (66.529,53.472,71.685)
OP1: (72.060,52.618,77.701)
OP2: (70.305,50.808,77.186)
C2: (67.818,53.919,71.541)
C1': (70.123,53.855,72.370)
C3': (71.476,54.856,74.068)
O5': (71.482,51.963,75.346)
O4': (70.944,52.875,72.965)
C5': (72.583,52.600,74.674)
P: (71.594,51.483,76.861)
C4': (72.064,53.527,73.601)
C2': (70.545,55.229,72.908)
O2': (71.214,55.914,71.857)
N1: (68.712,53.457,72.501)
O4: (64.856,52.305,72.649)
O2: (68.141,54.667,70.631)
C6: (68.285,52.637,73.520)
C5: (67.018,52.222,73.632)
O3': (72.546,55.818,74.147)
Image (generated by PyMOL):