ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:02117:02063

Extra

PDB:
ATOM 1 O3' G A2116 98.777 108.539 67.639 1.00 53.78 O
ATOM 2 P G A2117 97.983 107.792 68.813 1.00 56.71 P
ATOM 3 OP1 G A2117 98.860 107.811 70.031 1.00 51.94 O
ATOM 4 OP2 G A2117 97.488 106.488 68.280 1.00 56.60 O
ATOM 5 O5' G A2117 96.700 108.707 69.038 1.00 51.72 O
ATOM 6 C5' G A2117 96.607 109.560 70.176 1.00 44.90 C
ATOM 7 C4' G A2117 95.818 110.791 69.839 1.00 38.83 C
ATOM 8 O4' G A2117 94.517 110.407 69.330 1.00 34.70 O
ATOM 9 C3' G A2117 95.563 111.688 71.042 1.00 36.51 C
ATOM 10 O3' G A2117 95.478 113.037 70.615 1.00 33.81 O
ATOM 11 C2' G A2117 94.210 111.198 71.529 1.00 35.95 C
ATOM 12 O2' G A2117 93.513 112.180 72.261 1.00 36.62 O
ATOM 13 C1' G A2117 93.513 110.875 70.208 1.00 36.90 C
ATOM 14 N9 G A2117 92.506 109.827 70.334 1.00 38.00 N
ATOM 15 C8 G A2117 91.241 109.838 69.800 1.00 38.70 C
ATOM 16 N7 G A2117 90.561 108.760 70.073 1.00 38.15 N
ATOM 17 C5 G A2117 91.429 107.989 70.833 1.00 37.69 C
ATOM 18 C6 G A2117 91.243 106.719 71.423 1.00 37.88 C
ATOM 19 O6 G A2117 90.244 105.997 71.390 1.00 39.60 O
ATOM 20 N1 G A2117 92.374 106.307 72.118 1.00 36.90 N
ATOM 21 C2 G A2117 93.531 107.025 72.236 1.00 35.15 C
ATOM 22 N2 G A2117 94.498 106.463 72.969 1.00 33.09 N
ATOM 23 N3 G A2117 93.721 108.210 71.685 1.00 36.47 N
ATOM 24 C4 G A2117 92.633 108.630 71.004 1.00 37.15 C
ATOM 25 P G A2118 96.817 113.891 70.411 1.00 29.15 P
ATOM 26 OP1 G A2118 97.897 112.956 70.032 1.00 31.65 O
ATOM 27 OP2 G A2118 96.979 114.755 71.604 1.00 28.92 O
ATOM 28 O5' G A2118 96.482 114.768 69.135 1.00 26.14 O
TER

ATOM 1 O3' U B2062 96.836 107.001 76.354 1.00 35.01 O
ATOM 2 P U B2063 97.448 106.277 75.054 1.00 36.19 P
ATOM 3 OP1 U B2063 98.867 105.987 75.331 1.00 38.46 O
ATOM 4 OP2 U B2063 97.082 107.047 73.840 1.00 34.37 O
ATOM 5 O5' U B2063 96.721 104.863 75.023 1.00 38.15 O
ATOM 6 C5' U B2063 96.831 103.995 73.877 1.00 40.74 C
ATOM 7 C4' U B2063 96.874 102.549 74.315 1.00 42.17 C
ATOM 8 O4' U B2063 98.130 102.276 74.992 1.00 45.55 O
ATOM 9 C3' U B2063 95.824 102.146 75.333 1.00 42.63 C
ATOM 10 O3' U B2063 94.561 101.900 74.743 1.00 39.49 O
ATOM 11 C2' U B2063 96.450 100.910 75.955 1.00 45.52 C
ATOM 12 O2' U B2063 96.372 99.768 75.124 1.00 48.03 O
ATOM 13 C1' U B2063 97.911 101.348 76.048 1.00 47.02 C
ATOM 14 N1 U B2063 98.214 102.007 77.331 1.00 49.54 N
ATOM 15 C2 U B2063 98.430 101.198 78.442 1.00 50.44 C
ATOM 16 O2 U B2063 98.362 99.981 78.409 1.00 52.58 O
ATOM 17 N3 U B2063 98.722 101.871 79.599 1.00 50.80 N
ATOM 18 C4 U B2063 98.816 103.235 79.766 1.00 50.98 C
ATOM 19 O4 U B2063 99.145 103.685 80.866 1.00 53.43 O
ATOM 20 C5 U B2063 98.565 104.003 78.583 1.00 49.75 C
ATOM 21 C6 U B2063 98.282 103.381 77.438 1.00 49.12 C
ATOM 22 P A B2064 93.363 102.933 74.996 1.00 36.29 P
ATOM 23 OP1 A B2064 93.347 103.904 73.876 1.00 36.06 O
ATOM 24 OP2 A B2064 93.434 103.420 76.397 1.00 36.66 O
ATOM 25 O5' A B2064 92.062 102.042 74.869 1.00 36.13 O
TER

Atoms:
OP1: (98.860,107.811,70.031)
OP2: (97.488,106.488,68.280)
C3': (95.563,111.688,71.042)
C1': (93.513,110.875,70.208)
C5': (96.607,109.560,70.176)
O6: (90.244,105.997,71.390)
O4': (94.517,110.407,69.330)
C8: (91.241,109.838,69.800)
C2: (93.531,107.025,72.236)
C6: (91.243,106.719,71.423)
C5: (91.429,107.989,70.833)
C4: (92.633,108.630,71.004)
P: (97.983,107.792,68.813)
C4': (95.818,110.791,69.839)
C2': (94.210,111.198,71.529)
O2': (93.513,112.180,72.261)
N1: (92.374,106.307,72.118)
N2: (94.498,106.463,72.969)
N3: (93.721,108.210,71.685)
N7: (90.561,108.760,70.073)
N9: (92.506,109.827,70.334)
O5': (96.700,108.707,69.038)
O3': (95.478,113.037,70.615)
C4: (98.816,103.235,79.766)
N3: (98.722,101.871,79.599)
OP1: (98.867,105.987,75.331)
OP2: (97.082,107.047,73.840)
C2: (98.430,101.198,78.442)
C1': (97.911,101.348,76.048)
C3': (95.824,102.146,75.333)
O5': (96.721,104.863,75.023)
O4': (98.130,102.276,74.992)
C5': (96.831,103.995,73.877)
P: (97.448,106.277,75.054)
C4': (96.874,102.549,74.315)
C2': (96.450,100.910,75.955)
O2': (96.372,99.768,75.124)
N1: (98.214,102.007,77.331)
O4: (99.145,103.685,80.866)
O2: (98.362,99.981,78.409)
C6: (98.282,103.381,77.438)
C5: (98.565,104.003,78.583)
O3': (94.561,101.900,74.743)
Image (generated by PyMOL):
PyMOL image
show in jmol