Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0517:0600
Extra
PDB:
ATOM 1 O3' G A 516 10.593 140.177 94.559 1.00 51.25 O
ATOM 2 P G A 517 10.852 140.417 96.129 1.00 53.08 P
ATOM 3 OP1 G A 517 9.556 140.161 96.814 1.00 54.57 O
ATOM 4 OP2 G A 517 11.538 141.722 96.328 1.00 51.82 O
ATOM 5 O5' G A 517 11.870 139.259 96.527 1.00 49.33 O
ATOM 6 C5' G A 517 11.481 137.885 96.426 1.00 46.90 C
ATOM 7 C4' G A 517 12.680 136.982 96.583 1.00 45.75 C
ATOM 8 O4' G A 517 13.600 137.169 95.475 1.00 45.19 O
ATOM 9 C3' G A 517 13.571 137.214 97.790 1.00 43.90 C
ATOM 10 O3' G A 517 13.025 136.699 98.988 1.00 43.78 O
ATOM 11 C2' G A 517 14.811 136.452 97.372 1.00 43.41 C
ATOM 12 O2' G A 517 14.622 135.057 97.445 1.00 44.68 O
ATOM 13 C1' G A 517 14.919 136.871 95.906 1.00 43.74 C
ATOM 14 N9 G A 517 15.730 138.080 95.831 1.00 43.68 N
ATOM 15 C8 G A 517 15.298 139.382 95.872 1.00 43.60 C
ATOM 16 N7 G A 517 16.278 140.244 95.895 1.00 44.51 N
ATOM 17 C5 G A 517 17.424 139.464 95.841 1.00 43.01 C
ATOM 18 C6 G A 517 18.784 139.838 95.853 1.00 43.08 C
ATOM 19 O6 G A 517 19.265 140.969 95.926 1.00 44.54 O
ATOM 20 N1 G A 517 19.621 138.731 95.775 1.00 43.38 N
ATOM 21 C2 G A 517 19.200 137.427 95.695 1.00 43.84 C
ATOM 22 N2 G A 517 20.160 136.492 95.605 1.00 43.36 N
ATOM 23 N3 G A 517 17.932 137.065 95.697 1.00 43.34 N
ATOM 24 C4 G A 517 17.104 138.129 95.773 1.00 43.61 C
ATOM 25 P C A 518 13.248 137.490 100.368 1.00 44.02 P
ATOM 26 OP1 C A 518 12.371 136.809 101.360 1.00 45.18 O
ATOM 27 OP2 C A 518 13.131 138.958 100.154 1.00 41.99 O
ATOM 28 O5' C A 518 14.760 137.192 100.757 1.00 44.78 O
TER
ATOM 1 O3' U B 599 19.280 133.552 95.158 1.00 46.39 O
ATOM 2 P U B 600 20.121 132.568 96.109 1.00 48.07 P
ATOM 3 OP1 U B 600 21.306 133.349 96.557 1.00 48.32 O
ATOM 4 OP2 U B 600 20.321 131.276 95.419 1.00 47.26 O
ATOM 5 O5' U B 600 19.164 132.322 97.360 1.00 47.84 O
ATOM 6 C5' U B 600 18.978 133.350 98.350 1.00 49.57 C
ATOM 7 C4' U B 600 17.880 132.970 99.317 1.00 50.96 C
ATOM 8 O4' U B 600 16.633 132.779 98.595 1.00 50.65 O
ATOM 9 C3' U B 600 18.049 131.666 100.082 1.00 51.05 C
ATOM 10 O3' U B 600 18.922 131.791 101.195 1.00 50.28 O
ATOM 11 C2' U B 600 16.617 131.377 100.511 1.00 51.42 C
ATOM 12 O2' U B 600 16.196 132.161 101.610 1.00 52.48 O
ATOM 13 C1' U B 600 15.849 131.796 99.256 1.00 50.21 C
ATOM 14 N1 U B 600 15.677 130.645 98.360 1.00 48.66 N
ATOM 15 C2 U B 600 14.568 129.853 98.551 1.00 49.38 C
ATOM 16 O2 U B 600 13.713 130.097 99.386 1.00 50.43 O
ATOM 17 N3 U B 600 14.490 128.762 97.727 1.00 49.79 N
ATOM 18 C4 U B 600 15.379 128.402 96.743 1.00 49.52 C
ATOM 19 O4 U B 600 15.159 127.395 96.070 1.00 51.08 O
ATOM 20 C5 U B 600 16.488 129.286 96.592 1.00 49.06 C
ATOM 21 C6 U B 600 16.596 130.350 97.384 1.00 48.29 C
ATOM 22 P C B 601 19.423 130.471 101.966 1.00 50.55 P
ATOM 23 OP1 C B 601 20.348 130.930 103.036 1.00 51.11 O
ATOM 24 OP2 C B 601 19.882 129.465 100.981 1.00 48.43 O
ATOM 25 O5' C B 601 18.109 129.921 102.674 1.00 50.24 O
TER
ATOM 2 P G A 517 10.852 140.417 96.129 1.00 53.08 P
ATOM 3 OP1 G A 517 9.556 140.161 96.814 1.00 54.57 O
ATOM 4 OP2 G A 517 11.538 141.722 96.328 1.00 51.82 O
ATOM 5 O5' G A 517 11.870 139.259 96.527 1.00 49.33 O
ATOM 6 C5' G A 517 11.481 137.885 96.426 1.00 46.90 C
ATOM 7 C4' G A 517 12.680 136.982 96.583 1.00 45.75 C
ATOM 8 O4' G A 517 13.600 137.169 95.475 1.00 45.19 O
ATOM 9 C3' G A 517 13.571 137.214 97.790 1.00 43.90 C
ATOM 10 O3' G A 517 13.025 136.699 98.988 1.00 43.78 O
ATOM 11 C2' G A 517 14.811 136.452 97.372 1.00 43.41 C
ATOM 12 O2' G A 517 14.622 135.057 97.445 1.00 44.68 O
ATOM 13 C1' G A 517 14.919 136.871 95.906 1.00 43.74 C
ATOM 14 N9 G A 517 15.730 138.080 95.831 1.00 43.68 N
ATOM 15 C8 G A 517 15.298 139.382 95.872 1.00 43.60 C
ATOM 16 N7 G A 517 16.278 140.244 95.895 1.00 44.51 N
ATOM 17 C5 G A 517 17.424 139.464 95.841 1.00 43.01 C
ATOM 18 C6 G A 517 18.784 139.838 95.853 1.00 43.08 C
ATOM 19 O6 G A 517 19.265 140.969 95.926 1.00 44.54 O
ATOM 20 N1 G A 517 19.621 138.731 95.775 1.00 43.38 N
ATOM 21 C2 G A 517 19.200 137.427 95.695 1.00 43.84 C
ATOM 22 N2 G A 517 20.160 136.492 95.605 1.00 43.36 N
ATOM 23 N3 G A 517 17.932 137.065 95.697 1.00 43.34 N
ATOM 24 C4 G A 517 17.104 138.129 95.773 1.00 43.61 C
ATOM 25 P C A 518 13.248 137.490 100.368 1.00 44.02 P
ATOM 26 OP1 C A 518 12.371 136.809 101.360 1.00 45.18 O
ATOM 27 OP2 C A 518 13.131 138.958 100.154 1.00 41.99 O
ATOM 28 O5' C A 518 14.760 137.192 100.757 1.00 44.78 O
TER
ATOM 1 O3' U B 599 19.280 133.552 95.158 1.00 46.39 O
ATOM 2 P U B 600 20.121 132.568 96.109 1.00 48.07 P
ATOM 3 OP1 U B 600 21.306 133.349 96.557 1.00 48.32 O
ATOM 4 OP2 U B 600 20.321 131.276 95.419 1.00 47.26 O
ATOM 5 O5' U B 600 19.164 132.322 97.360 1.00 47.84 O
ATOM 6 C5' U B 600 18.978 133.350 98.350 1.00 49.57 C
ATOM 7 C4' U B 600 17.880 132.970 99.317 1.00 50.96 C
ATOM 8 O4' U B 600 16.633 132.779 98.595 1.00 50.65 O
ATOM 9 C3' U B 600 18.049 131.666 100.082 1.00 51.05 C
ATOM 10 O3' U B 600 18.922 131.791 101.195 1.00 50.28 O
ATOM 11 C2' U B 600 16.617 131.377 100.511 1.00 51.42 C
ATOM 12 O2' U B 600 16.196 132.161 101.610 1.00 52.48 O
ATOM 13 C1' U B 600 15.849 131.796 99.256 1.00 50.21 C
ATOM 14 N1 U B 600 15.677 130.645 98.360 1.00 48.66 N
ATOM 15 C2 U B 600 14.568 129.853 98.551 1.00 49.38 C
ATOM 16 O2 U B 600 13.713 130.097 99.386 1.00 50.43 O
ATOM 17 N3 U B 600 14.490 128.762 97.727 1.00 49.79 N
ATOM 18 C4 U B 600 15.379 128.402 96.743 1.00 49.52 C
ATOM 19 O4 U B 600 15.159 127.395 96.070 1.00 51.08 O
ATOM 20 C5 U B 600 16.488 129.286 96.592 1.00 49.06 C
ATOM 21 C6 U B 600 16.596 130.350 97.384 1.00 48.29 C
ATOM 22 P C B 601 19.423 130.471 101.966 1.00 50.55 P
ATOM 23 OP1 C B 601 20.348 130.930 103.036 1.00 51.11 O
ATOM 24 OP2 C B 601 19.882 129.465 100.981 1.00 48.43 O
ATOM 25 O5' C B 601 18.109 129.921 102.674 1.00 50.24 O
TER
Atoms:
OP1: (9.556,140.161,96.814)
OP2: (11.538,141.722,96.328)
C3': (13.571,137.214,97.790)
C1': (14.919,136.871,95.906)
C5': (11.481,137.885,96.426)
O6: (19.265,140.969,95.926)
O4': (13.600,137.169,95.475)
C8: (15.298,139.382,95.872)
C2: (19.200,137.427,95.695)
C6: (18.784,139.838,95.853)
C5: (17.424,139.464,95.841)
C4: (17.104,138.129,95.773)
P: (10.852,140.417,96.129)
C4': (12.680,136.982,96.583)
C2': (14.811,136.452,97.372)
O2': (14.622,135.057,97.445)
N1: (19.621,138.731,95.775)
N2: (20.160,136.492,95.605)
N3: (17.932,137.065,95.697)
N7: (16.278,140.244,95.895)
N9: (15.730,138.080,95.831)
O5': (11.870,139.259,96.527)
O3': (13.025,136.699,98.988)
OP2: (11.538,141.722,96.328)
C3': (13.571,137.214,97.790)
C1': (14.919,136.871,95.906)
C5': (11.481,137.885,96.426)
O6: (19.265,140.969,95.926)
O4': (13.600,137.169,95.475)
C8: (15.298,139.382,95.872)
C2: (19.200,137.427,95.695)
C6: (18.784,139.838,95.853)
C5: (17.424,139.464,95.841)
C4: (17.104,138.129,95.773)
P: (10.852,140.417,96.129)
C4': (12.680,136.982,96.583)
C2': (14.811,136.452,97.372)
O2': (14.622,135.057,97.445)
N1: (19.621,138.731,95.775)
N2: (20.160,136.492,95.605)
N3: (17.932,137.065,95.697)
N7: (16.278,140.244,95.895)
N9: (15.730,138.080,95.831)
O5': (11.870,139.259,96.527)
O3': (13.025,136.699,98.988)
C4: (15.379,128.402,96.743)
N3: (14.490,128.762,97.727)
OP1: (21.306,133.349,96.557)
OP2: (20.321,131.276,95.419)
C2: (14.568,129.853,98.551)
C1': (15.849,131.796,99.256)
C3': (18.049,131.666,100.082)
O5': (19.164,132.322,97.360)
O4': (16.633,132.779,98.595)
C5': (18.978,133.350,98.350)
P: (20.121,132.568,96.109)
C4': (17.880,132.970,99.317)
C2': (16.617,131.377,100.511)
O2': (16.196,132.161,101.610)
N1: (15.677,130.645,98.360)
O4: (15.159,127.395,96.070)
O2: (13.713,130.097,99.386)
C6: (16.596,130.350,97.384)
C5: (16.488,129.286,96.592)
O3': (18.922,131.791,101.195)
N3: (14.490,128.762,97.727)
OP1: (21.306,133.349,96.557)
OP2: (20.321,131.276,95.419)
C2: (14.568,129.853,98.551)
C1': (15.849,131.796,99.256)
C3': (18.049,131.666,100.082)
O5': (19.164,132.322,97.360)
O4': (16.633,132.779,98.595)
C5': (18.978,133.350,98.350)
P: (20.121,132.568,96.109)
C4': (17.880,132.970,99.317)
C2': (16.617,131.377,100.511)
O2': (16.196,132.161,101.610)
N1: (15.677,130.645,98.360)
O4: (15.159,127.395,96.070)
O2: (13.713,130.097,99.386)
C6: (16.596,130.350,97.384)
C5: (16.488,129.286,96.592)
O3': (18.922,131.791,101.195)
Image (generated by PyMOL):