ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:02117:02063

Extra

PDB:
ATOM 1 O3' G A2116 99.138 108.986 67.951 1.00 59.27 O
ATOM 2 P G A2117 98.533 108.321 69.277 1.00 61.01 P
ATOM 3 OP1 G A2117 99.431 108.738 70.397 1.00 55.31 O
ATOM 4 OP2 G A2117 98.299 106.870 69.019 1.00 60.27 O
ATOM 5 O5' G A2117 97.106 109.023 69.429 1.00 59.01 O
ATOM 6 C5' G A2117 96.795 109.796 70.607 1.00 55.08 C
ATOM 7 C4' G A2117 96.032 111.045 70.240 1.00 49.29 C
ATOM 8 O4' G A2117 94.753 110.666 69.670 1.00 47.21 O
ATOM 9 C3' G A2117 95.723 111.946 71.433 1.00 47.46 C
ATOM 10 O3' G A2117 95.687 113.314 71.035 1.00 44.75 O
ATOM 11 C2' G A2117 94.343 111.458 71.861 1.00 46.78 C
ATOM 12 O2' G A2117 93.562 112.422 72.535 1.00 45.82 O
ATOM 13 C1' G A2117 93.707 111.094 70.522 1.00 47.20 C
ATOM 14 N9 G A2117 92.744 110.002 70.662 1.00 47.10 N
ATOM 15 C8 G A2117 91.479 109.961 70.136 1.00 46.72 C
ATOM 16 N7 G A2117 90.827 108.877 70.456 1.00 46.22 N
ATOM 17 C5 G A2117 91.717 108.151 71.232 1.00 45.17 C
ATOM 18 C6 G A2117 91.561 106.902 71.876 1.00 45.21 C
ATOM 19 O6 G A2117 90.574 106.166 71.894 1.00 46.53 O
ATOM 20 N1 G A2117 92.706 106.533 72.563 1.00 44.05 N
ATOM 21 C2 G A2117 93.852 107.268 72.628 1.00 43.50 C
ATOM 22 N2 G A2117 94.839 106.736 73.346 1.00 44.04 N
ATOM 23 N3 G A2117 94.016 108.439 72.036 1.00 45.24 N
ATOM 24 C4 G A2117 92.911 108.820 71.361 1.00 45.56 C
ATOM 25 P G A2118 97.060 114.110 70.771 1.00 40.67 P
ATOM 26 OP1 G A2118 98.042 113.124 70.278 1.00 43.64 O
ATOM 27 OP2 G A2118 97.381 114.911 71.976 1.00 37.50 O
ATOM 28 O5' G A2118 96.671 115.022 69.526 1.00 35.65 O
TER

ATOM 1 O3' U B2062 97.085 107.344 76.800 1.00 45.20 O
ATOM 2 P U B2063 97.705 106.678 75.482 1.00 47.60 P
ATOM 3 OP1 U B2063 99.170 106.600 75.680 1.00 50.51 O
ATOM 4 OP2 U B2063 97.165 107.379 74.294 1.00 45.93 O
ATOM 5 O5' U B2063 97.136 105.196 75.518 1.00 49.07 O
ATOM 6 C5' U B2063 97.193 104.358 74.355 1.00 53.05 C
ATOM 7 C4' U B2063 97.230 102.907 74.767 1.00 54.37 C
ATOM 8 O4' U B2063 98.455 102.653 75.497 1.00 56.97 O
ATOM 9 C3' U B2063 96.142 102.485 75.734 1.00 54.72 C
ATOM 10 O3' U B2063 94.926 102.210 75.061 1.00 51.57 O
ATOM 11 C2' U B2063 96.756 101.257 76.386 1.00 56.79 C
ATOM 12 O2' U B2063 96.724 100.125 75.538 1.00 59.38 O
ATOM 13 C1' U B2063 98.214 101.696 76.520 1.00 58.28 C
ATOM 14 N1 U B2063 98.576 102.288 77.821 1.00 58.95 N
ATOM 15 C2 U B2063 98.808 101.426 78.893 1.00 59.05 C
ATOM 16 O2 U B2063 98.673 100.221 78.822 1.00 59.37 O
ATOM 17 N3 U B2063 99.199 102.039 80.057 1.00 60.62 N
ATOM 18 C4 U B2063 99.370 103.394 80.271 1.00 61.32 C
ATOM 19 O4 U B2063 99.786 103.789 81.368 1.00 61.59 O
ATOM 20 C5 U B2063 99.082 104.218 79.131 1.00 61.00 C
ATOM 21 C6 U B2063 98.703 103.653 77.977 1.00 59.45 C
ATOM 22 P A B2064 93.650 103.139 75.338 1.00 48.91 P
ATOM 23 OP1 A B2064 93.639 104.205 74.306 1.00 46.88 O
ATOM 24 OP2 A B2064 93.658 103.505 76.783 1.00 47.08 O
ATOM 25 O5' A B2064 92.415 102.177 75.075 1.00 45.80 O
TER

Atoms:
OP1: (99.431,108.738,70.397)
OP2: (98.299,106.870,69.019)
C3': (95.723,111.946,71.433)
C1': (93.707,111.094,70.522)
C5': (96.795,109.796,70.607)
O6: (90.574,106.166,71.894)
O4': (94.753,110.666,69.670)
C8: (91.479,109.961,70.136)
C2: (93.852,107.268,72.628)
C6: (91.561,106.902,71.876)
C5: (91.717,108.151,71.232)
C4: (92.911,108.820,71.361)
P: (98.533,108.321,69.277)
C4': (96.032,111.045,70.240)
C2': (94.343,111.458,71.861)
O2': (93.562,112.422,72.535)
N1: (92.706,106.533,72.563)
N2: (94.839,106.736,73.346)
N3: (94.016,108.439,72.036)
N7: (90.827,108.877,70.456)
N9: (92.744,110.002,70.662)
O5': (97.106,109.023,69.429)
O3': (95.687,113.314,71.035)
C4: (99.370,103.394,80.271)
N3: (99.199,102.039,80.057)
OP1: (99.170,106.600,75.680)
OP2: (97.165,107.379,74.294)
C2: (98.808,101.426,78.893)
C1': (98.214,101.696,76.520)
C3': (96.142,102.485,75.734)
O5': (97.136,105.196,75.518)
O4': (98.455,102.653,75.497)
C5': (97.193,104.358,74.355)
P: (97.705,106.678,75.482)
C4': (97.230,102.907,74.767)
C2': (96.756,101.257,76.386)
O2': (96.724,100.125,75.538)
N1: (98.576,102.288,77.821)
O4: (99.786,103.789,81.368)
O2: (98.673,100.221,78.822)
C6: (98.703,103.653,77.977)
C5: (99.082,104.218,79.131)
O3': (94.926,102.210,75.061)
Image (generated by PyMOL):
PyMOL image
show in jmol