Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02117:02063
Extra
PDB:
ATOM 1 O3' G A2116 98.691 108.592 67.621 1.00 58.25 O
ATOM 2 P G A2117 97.911 107.821 68.788 1.00 60.42 P
ATOM 3 OP1 G A2117 98.803 107.864 69.990 1.00 57.60 O
ATOM 4 OP2 G A2117 97.453 106.506 68.252 1.00 60.59 O
ATOM 5 O5' G A2117 96.611 108.713 69.035 1.00 56.19 O
ATOM 6 C5' G A2117 96.534 109.599 70.161 1.00 49.21 C
ATOM 7 C4' G A2117 95.750 110.832 69.804 1.00 42.97 C
ATOM 8 O4' G A2117 94.450 110.432 69.309 1.00 40.14 O
ATOM 9 C3' G A2117 95.489 111.768 70.976 1.00 40.53 C
ATOM 10 O3' G A2117 95.416 113.099 70.498 1.00 39.34 O
ATOM 11 C2' G A2117 94.131 111.297 71.472 1.00 39.50 C
ATOM 12 O2' G A2117 93.402 112.280 72.166 1.00 38.62 O
ATOM 13 C1' G A2117 93.443 110.936 70.161 1.00 40.83 C
ATOM 14 N9 G A2117 92.433 109.897 70.317 1.00 42.66 N
ATOM 15 C8 G A2117 91.167 109.902 69.789 1.00 43.34 C
ATOM 16 N7 G A2117 90.487 108.829 70.082 1.00 43.23 N
ATOM 17 C5 G A2117 91.355 108.070 70.853 1.00 43.55 C
ATOM 18 C6 G A2117 91.169 106.811 71.466 1.00 43.33 C
ATOM 19 O6 G A2117 90.168 106.095 71.453 1.00 44.72 O
ATOM 20 N1 G A2117 92.301 106.406 72.160 1.00 42.41 N
ATOM 21 C2 G A2117 93.459 107.123 72.262 1.00 42.11 C
ATOM 22 N2 G A2117 94.430 106.561 72.991 1.00 42.81 N
ATOM 23 N3 G A2117 93.648 108.302 71.696 1.00 42.41 N
ATOM 24 C4 G A2117 92.560 108.713 71.011 1.00 42.91 C
ATOM 25 P G A2118 96.729 114.020 70.505 1.00 37.84 P
ATOM 26 OP1 G A2118 97.921 113.158 70.385 1.00 38.20 O
ATOM 27 OP2 G A2118 96.611 114.949 71.657 1.00 36.13 O
ATOM 28 O5' G A2118 96.603 114.826 69.143 1.00 32.88 O
TER
ATOM 1 O3' U B2062 96.811 107.074 76.367 1.00 38.22 O
ATOM 2 P U B2063 97.390 106.380 75.044 1.00 40.13 P
ATOM 3 OP1 U B2063 98.856 106.288 75.184 1.00 41.13 O
ATOM 4 OP2 U B2063 96.814 107.024 73.844 1.00 39.46 O
ATOM 5 O5' U B2063 96.838 104.893 75.113 1.00 44.33 O
ATOM 6 C5' U B2063 96.806 104.061 73.930 1.00 48.22 C
ATOM 7 C4' U B2063 96.857 102.602 74.315 1.00 48.42 C
ATOM 8 O4' U B2063 98.122 102.324 74.967 1.00 49.83 O
ATOM 9 C3' U B2063 95.820 102.193 75.343 1.00 49.34 C
ATOM 10 O3' U B2063 94.556 101.945 74.752 1.00 47.29 O
ATOM 11 C2' U B2063 96.459 100.965 75.968 1.00 51.57 C
ATOM 12 O2' U B2063 96.371 99.808 75.161 1.00 54.28 O
ATOM 13 C1' U B2063 97.920 101.408 76.034 1.00 52.64 C
ATOM 14 N1 U B2063 98.245 102.083 77.305 1.00 54.63 N
ATOM 15 C2 U B2063 98.243 101.317 78.470 1.00 55.47 C
ATOM 16 O2 U B2063 97.983 100.118 78.487 1.00 56.53 O
ATOM 17 N3 U B2063 98.553 102.009 79.615 1.00 55.91 N
ATOM 18 C4 U B2063 98.858 103.353 79.722 1.00 55.91 C
ATOM 19 O4 U B2063 99.157 103.822 80.826 1.00 56.25 O
ATOM 20 C5 U B2063 98.833 104.071 78.483 1.00 55.10 C
ATOM 21 C6 U B2063 98.537 103.431 77.348 1.00 54.24 C
ATOM 22 P A B2064 93.376 103.015 74.938 1.00 43.90 P
ATOM 23 OP1 A B2064 93.422 103.931 73.772 1.00 42.90 O
ATOM 24 OP2 A B2064 93.434 103.561 76.315 1.00 41.91 O
ATOM 25 O5' A B2064 92.056 102.147 74.830 1.00 43.34 O
TER
ATOM 2 P G A2117 97.911 107.821 68.788 1.00 60.42 P
ATOM 3 OP1 G A2117 98.803 107.864 69.990 1.00 57.60 O
ATOM 4 OP2 G A2117 97.453 106.506 68.252 1.00 60.59 O
ATOM 5 O5' G A2117 96.611 108.713 69.035 1.00 56.19 O
ATOM 6 C5' G A2117 96.534 109.599 70.161 1.00 49.21 C
ATOM 7 C4' G A2117 95.750 110.832 69.804 1.00 42.97 C
ATOM 8 O4' G A2117 94.450 110.432 69.309 1.00 40.14 O
ATOM 9 C3' G A2117 95.489 111.768 70.976 1.00 40.53 C
ATOM 10 O3' G A2117 95.416 113.099 70.498 1.00 39.34 O
ATOM 11 C2' G A2117 94.131 111.297 71.472 1.00 39.50 C
ATOM 12 O2' G A2117 93.402 112.280 72.166 1.00 38.62 O
ATOM 13 C1' G A2117 93.443 110.936 70.161 1.00 40.83 C
ATOM 14 N9 G A2117 92.433 109.897 70.317 1.00 42.66 N
ATOM 15 C8 G A2117 91.167 109.902 69.789 1.00 43.34 C
ATOM 16 N7 G A2117 90.487 108.829 70.082 1.00 43.23 N
ATOM 17 C5 G A2117 91.355 108.070 70.853 1.00 43.55 C
ATOM 18 C6 G A2117 91.169 106.811 71.466 1.00 43.33 C
ATOM 19 O6 G A2117 90.168 106.095 71.453 1.00 44.72 O
ATOM 20 N1 G A2117 92.301 106.406 72.160 1.00 42.41 N
ATOM 21 C2 G A2117 93.459 107.123 72.262 1.00 42.11 C
ATOM 22 N2 G A2117 94.430 106.561 72.991 1.00 42.81 N
ATOM 23 N3 G A2117 93.648 108.302 71.696 1.00 42.41 N
ATOM 24 C4 G A2117 92.560 108.713 71.011 1.00 42.91 C
ATOM 25 P G A2118 96.729 114.020 70.505 1.00 37.84 P
ATOM 26 OP1 G A2118 97.921 113.158 70.385 1.00 38.20 O
ATOM 27 OP2 G A2118 96.611 114.949 71.657 1.00 36.13 O
ATOM 28 O5' G A2118 96.603 114.826 69.143 1.00 32.88 O
TER
ATOM 1 O3' U B2062 96.811 107.074 76.367 1.00 38.22 O
ATOM 2 P U B2063 97.390 106.380 75.044 1.00 40.13 P
ATOM 3 OP1 U B2063 98.856 106.288 75.184 1.00 41.13 O
ATOM 4 OP2 U B2063 96.814 107.024 73.844 1.00 39.46 O
ATOM 5 O5' U B2063 96.838 104.893 75.113 1.00 44.33 O
ATOM 6 C5' U B2063 96.806 104.061 73.930 1.00 48.22 C
ATOM 7 C4' U B2063 96.857 102.602 74.315 1.00 48.42 C
ATOM 8 O4' U B2063 98.122 102.324 74.967 1.00 49.83 O
ATOM 9 C3' U B2063 95.820 102.193 75.343 1.00 49.34 C
ATOM 10 O3' U B2063 94.556 101.945 74.752 1.00 47.29 O
ATOM 11 C2' U B2063 96.459 100.965 75.968 1.00 51.57 C
ATOM 12 O2' U B2063 96.371 99.808 75.161 1.00 54.28 O
ATOM 13 C1' U B2063 97.920 101.408 76.034 1.00 52.64 C
ATOM 14 N1 U B2063 98.245 102.083 77.305 1.00 54.63 N
ATOM 15 C2 U B2063 98.243 101.317 78.470 1.00 55.47 C
ATOM 16 O2 U B2063 97.983 100.118 78.487 1.00 56.53 O
ATOM 17 N3 U B2063 98.553 102.009 79.615 1.00 55.91 N
ATOM 18 C4 U B2063 98.858 103.353 79.722 1.00 55.91 C
ATOM 19 O4 U B2063 99.157 103.822 80.826 1.00 56.25 O
ATOM 20 C5 U B2063 98.833 104.071 78.483 1.00 55.10 C
ATOM 21 C6 U B2063 98.537 103.431 77.348 1.00 54.24 C
ATOM 22 P A B2064 93.376 103.015 74.938 1.00 43.90 P
ATOM 23 OP1 A B2064 93.422 103.931 73.772 1.00 42.90 O
ATOM 24 OP2 A B2064 93.434 103.561 76.315 1.00 41.91 O
ATOM 25 O5' A B2064 92.056 102.147 74.830 1.00 43.34 O
TER
Atoms:
OP1: (98.803,107.864,69.990)
OP2: (97.453,106.506,68.252)
C3': (95.489,111.768,70.976)
C1': (93.443,110.936,70.161)
C5': (96.534,109.599,70.161)
O6: (90.168,106.095,71.453)
O4': (94.450,110.432,69.309)
C8: (91.167,109.902,69.789)
C2: (93.459,107.123,72.262)
C6: (91.169,106.811,71.466)
C5: (91.355,108.070,70.853)
C4: (92.560,108.713,71.011)
P: (97.911,107.821,68.788)
C4': (95.750,110.832,69.804)
C2': (94.131,111.297,71.472)
O2': (93.402,112.280,72.166)
N1: (92.301,106.406,72.160)
N2: (94.430,106.561,72.991)
N3: (93.648,108.302,71.696)
N7: (90.487,108.829,70.082)
N9: (92.433,109.897,70.317)
O5': (96.611,108.713,69.035)
O3': (95.416,113.099,70.498)
OP2: (97.453,106.506,68.252)
C3': (95.489,111.768,70.976)
C1': (93.443,110.936,70.161)
C5': (96.534,109.599,70.161)
O6: (90.168,106.095,71.453)
O4': (94.450,110.432,69.309)
C8: (91.167,109.902,69.789)
C2: (93.459,107.123,72.262)
C6: (91.169,106.811,71.466)
C5: (91.355,108.070,70.853)
C4: (92.560,108.713,71.011)
P: (97.911,107.821,68.788)
C4': (95.750,110.832,69.804)
C2': (94.131,111.297,71.472)
O2': (93.402,112.280,72.166)
N1: (92.301,106.406,72.160)
N2: (94.430,106.561,72.991)
N3: (93.648,108.302,71.696)
N7: (90.487,108.829,70.082)
N9: (92.433,109.897,70.317)
O5': (96.611,108.713,69.035)
O3': (95.416,113.099,70.498)
C4: (98.858,103.353,79.722)
N3: (98.553,102.009,79.615)
OP1: (98.856,106.288,75.184)
OP2: (96.814,107.024,73.844)
C2: (98.243,101.317,78.470)
C1': (97.920,101.408,76.034)
C3': (95.820,102.193,75.343)
O5': (96.838,104.893,75.113)
O4': (98.122,102.324,74.967)
C5': (96.806,104.061,73.930)
P: (97.390,106.380,75.044)
C4': (96.857,102.602,74.315)
C2': (96.459,100.965,75.968)
O2': (96.371,99.808,75.161)
N1: (98.245,102.083,77.305)
O4: (99.157,103.822,80.826)
O2: (97.983,100.118,78.487)
C6: (98.537,103.431,77.348)
C5: (98.833,104.071,78.483)
O3': (94.556,101.945,74.752)
N3: (98.553,102.009,79.615)
OP1: (98.856,106.288,75.184)
OP2: (96.814,107.024,73.844)
C2: (98.243,101.317,78.470)
C1': (97.920,101.408,76.034)
C3': (95.820,102.193,75.343)
O5': (96.838,104.893,75.113)
O4': (98.122,102.324,74.967)
C5': (96.806,104.061,73.930)
P: (97.390,106.380,75.044)
C4': (96.857,102.602,74.315)
C2': (96.459,100.965,75.968)
O2': (96.371,99.808,75.161)
N1: (98.245,102.083,77.305)
O4: (99.157,103.822,80.826)
O2: (97.983,100.118,78.487)
C6: (98.537,103.431,77.348)
C5: (98.833,104.071,78.483)
O3': (94.556,101.945,74.752)
Image (generated by PyMOL):