Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02220:02260
Extra
PDB:
ATOM 1 O3' U A2219 81.205 48.910 70.000 1.00 66.83 O
ATOM 2 P G A2220 80.010 49.180 68.957 1.00 70.94 P
ATOM 3 OP1 G A2220 79.736 47.938 68.179 1.00 70.82 O
ATOM 4 OP2 G A2220 80.360 50.433 68.231 1.00 70.84 O
ATOM 5 O5' G A2220 78.752 49.473 69.900 1.00 69.85 O
ATOM 6 C5' G A2220 78.580 50.771 70.509 1.00 68.75 C
ATOM 7 C4' G A2220 77.621 50.714 71.682 1.00 66.71 C
ATOM 8 O4' G A2220 76.250 50.545 71.223 1.00 66.46 O
ATOM 9 C3' G A2220 77.857 49.654 72.751 1.00 65.50 C
ATOM 10 O3' G A2220 77.598 50.228 74.028 1.00 65.12 O
ATOM 11 C2' G A2220 76.782 48.614 72.432 1.00 65.49 C
ATOM 12 O2' G A2220 76.368 47.894 73.576 1.00 66.05 O
ATOM 13 C1' G A2220 75.636 49.499 71.950 1.00 64.61 C
ATOM 14 N9 G A2220 74.656 48.846 71.083 1.00 62.81 N
ATOM 15 C8 G A2220 74.889 48.238 69.871 1.00 62.37 C
ATOM 16 N7 G A2220 73.801 47.789 69.305 1.00 61.05 N
ATOM 17 C5 G A2220 72.789 48.107 70.200 1.00 61.14 C
ATOM 18 C6 G A2220 71.386 47.875 70.127 1.00 60.67 C
ATOM 19 O6 G A2220 70.739 47.326 69.228 1.00 60.54 O
ATOM 20 N1 G A2220 70.729 48.357 71.252 1.00 59.85 N
ATOM 21 C2 G A2220 71.335 48.981 72.312 1.00 61.22 C
ATOM 22 N2 G A2220 70.525 49.376 73.304 1.00 61.88 N
ATOM 23 N3 G A2220 72.640 49.203 72.396 1.00 61.76 N
ATOM 24 C4 G A2220 73.300 48.747 71.310 1.00 61.87 C
ATOM 25 P A A2221 78.786 50.955 74.830 1.00 64.96 P
ATOM 26 OP1 A A2221 80.080 50.311 74.479 1.00 63.90 O
ATOM 27 OP2 A A2221 78.382 51.069 76.257 1.00 64.95 O
ATOM 28 O5' A A2221 78.802 52.423 74.226 1.00 64.61 O
TER
ATOM 1 O3' G B2259 72.960 50.389 76.846 1.00 67.05 O
ATOM 2 P U B2260 71.731 51.432 76.812 1.00 70.07 P
ATOM 3 OP1 U B2260 72.117 52.604 77.649 1.00 68.37 O
ATOM 4 OP2 U B2260 70.466 50.697 77.111 1.00 69.93 O
ATOM 5 O5' U B2260 71.619 51.886 75.291 1.00 70.64 O
ATOM 6 C5' U B2260 72.728 52.480 74.600 1.00 73.08 C
ATOM 7 C4' U B2260 72.219 53.450 73.570 1.00 74.23 C
ATOM 8 O4' U B2260 71.061 52.853 72.954 1.00 75.28 O
ATOM 9 C3' U B2260 71.663 54.766 74.104 1.00 75.55 C
ATOM 10 O3' U B2260 72.738 55.705 74.210 1.00 73.23 O
ATOM 11 C2' U B2260 70.731 55.215 72.979 1.00 78.78 C
ATOM 12 O2' U B2260 71.396 55.949 71.965 1.00 82.99 O
ATOM 13 C1' U B2260 70.284 53.877 72.379 1.00 79.42 C
ATOM 14 N1 U B2260 68.862 53.539 72.507 1.00 81.69 N
ATOM 15 C2 U B2260 68.064 53.710 71.383 1.00 83.13 C
ATOM 16 O2 U B2260 68.485 54.156 70.325 1.00 83.79 O
ATOM 17 N3 U B2260 66.754 53.343 71.545 1.00 84.31 N
ATOM 18 C4 U B2260 66.168 52.845 72.687 1.00 85.32 C
ATOM 19 O4 U B2260 64.977 52.535 72.666 1.00 87.55 O
ATOM 20 C5 U B2260 67.052 52.717 73.808 1.00 85.06 C
ATOM 21 C6 U B2260 68.337 53.061 73.682 1.00 83.54 C
ATOM 22 P G B2261 72.731 56.840 75.350 1.00 71.00 P
ATOM 23 OP1 G B2261 71.470 56.742 76.125 1.00 71.33 O
ATOM 24 OP2 G B2261 73.063 58.111 74.651 1.00 70.99 O
ATOM 25 O5' G B2261 73.956 56.411 76.284 1.00 67.91 O
TER
ATOM 2 P G A2220 80.010 49.180 68.957 1.00 70.94 P
ATOM 3 OP1 G A2220 79.736 47.938 68.179 1.00 70.82 O
ATOM 4 OP2 G A2220 80.360 50.433 68.231 1.00 70.84 O
ATOM 5 O5' G A2220 78.752 49.473 69.900 1.00 69.85 O
ATOM 6 C5' G A2220 78.580 50.771 70.509 1.00 68.75 C
ATOM 7 C4' G A2220 77.621 50.714 71.682 1.00 66.71 C
ATOM 8 O4' G A2220 76.250 50.545 71.223 1.00 66.46 O
ATOM 9 C3' G A2220 77.857 49.654 72.751 1.00 65.50 C
ATOM 10 O3' G A2220 77.598 50.228 74.028 1.00 65.12 O
ATOM 11 C2' G A2220 76.782 48.614 72.432 1.00 65.49 C
ATOM 12 O2' G A2220 76.368 47.894 73.576 1.00 66.05 O
ATOM 13 C1' G A2220 75.636 49.499 71.950 1.00 64.61 C
ATOM 14 N9 G A2220 74.656 48.846 71.083 1.00 62.81 N
ATOM 15 C8 G A2220 74.889 48.238 69.871 1.00 62.37 C
ATOM 16 N7 G A2220 73.801 47.789 69.305 1.00 61.05 N
ATOM 17 C5 G A2220 72.789 48.107 70.200 1.00 61.14 C
ATOM 18 C6 G A2220 71.386 47.875 70.127 1.00 60.67 C
ATOM 19 O6 G A2220 70.739 47.326 69.228 1.00 60.54 O
ATOM 20 N1 G A2220 70.729 48.357 71.252 1.00 59.85 N
ATOM 21 C2 G A2220 71.335 48.981 72.312 1.00 61.22 C
ATOM 22 N2 G A2220 70.525 49.376 73.304 1.00 61.88 N
ATOM 23 N3 G A2220 72.640 49.203 72.396 1.00 61.76 N
ATOM 24 C4 G A2220 73.300 48.747 71.310 1.00 61.87 C
ATOM 25 P A A2221 78.786 50.955 74.830 1.00 64.96 P
ATOM 26 OP1 A A2221 80.080 50.311 74.479 1.00 63.90 O
ATOM 27 OP2 A A2221 78.382 51.069 76.257 1.00 64.95 O
ATOM 28 O5' A A2221 78.802 52.423 74.226 1.00 64.61 O
TER
ATOM 1 O3' G B2259 72.960 50.389 76.846 1.00 67.05 O
ATOM 2 P U B2260 71.731 51.432 76.812 1.00 70.07 P
ATOM 3 OP1 U B2260 72.117 52.604 77.649 1.00 68.37 O
ATOM 4 OP2 U B2260 70.466 50.697 77.111 1.00 69.93 O
ATOM 5 O5' U B2260 71.619 51.886 75.291 1.00 70.64 O
ATOM 6 C5' U B2260 72.728 52.480 74.600 1.00 73.08 C
ATOM 7 C4' U B2260 72.219 53.450 73.570 1.00 74.23 C
ATOM 8 O4' U B2260 71.061 52.853 72.954 1.00 75.28 O
ATOM 9 C3' U B2260 71.663 54.766 74.104 1.00 75.55 C
ATOM 10 O3' U B2260 72.738 55.705 74.210 1.00 73.23 O
ATOM 11 C2' U B2260 70.731 55.215 72.979 1.00 78.78 C
ATOM 12 O2' U B2260 71.396 55.949 71.965 1.00 82.99 O
ATOM 13 C1' U B2260 70.284 53.877 72.379 1.00 79.42 C
ATOM 14 N1 U B2260 68.862 53.539 72.507 1.00 81.69 N
ATOM 15 C2 U B2260 68.064 53.710 71.383 1.00 83.13 C
ATOM 16 O2 U B2260 68.485 54.156 70.325 1.00 83.79 O
ATOM 17 N3 U B2260 66.754 53.343 71.545 1.00 84.31 N
ATOM 18 C4 U B2260 66.168 52.845 72.687 1.00 85.32 C
ATOM 19 O4 U B2260 64.977 52.535 72.666 1.00 87.55 O
ATOM 20 C5 U B2260 67.052 52.717 73.808 1.00 85.06 C
ATOM 21 C6 U B2260 68.337 53.061 73.682 1.00 83.54 C
ATOM 22 P G B2261 72.731 56.840 75.350 1.00 71.00 P
ATOM 23 OP1 G B2261 71.470 56.742 76.125 1.00 71.33 O
ATOM 24 OP2 G B2261 73.063 58.111 74.651 1.00 70.99 O
ATOM 25 O5' G B2261 73.956 56.411 76.284 1.00 67.91 O
TER
Atoms:
OP1: (79.736,47.938,68.179)
OP2: (80.360,50.433,68.231)
C3': (77.857,49.654,72.751)
C1': (75.636,49.499,71.950)
C5': (78.580,50.771,70.509)
O6: (70.739,47.326,69.228)
O4': (76.250,50.545,71.223)
C8: (74.889,48.238,69.871)
C2: (71.335,48.981,72.312)
C6: (71.386,47.875,70.127)
C5: (72.789,48.107,70.200)
C4: (73.300,48.747,71.310)
P: (80.010,49.180,68.957)
C4': (77.621,50.714,71.682)
C2': (76.782,48.614,72.432)
O2': (76.368,47.894,73.576)
N1: (70.729,48.357,71.252)
N2: (70.525,49.376,73.304)
N3: (72.640,49.203,72.396)
N7: (73.801,47.789,69.305)
N9: (74.656,48.846,71.083)
O5': (78.752,49.473,69.900)
O3': (77.598,50.228,74.028)
OP2: (80.360,50.433,68.231)
C3': (77.857,49.654,72.751)
C1': (75.636,49.499,71.950)
C5': (78.580,50.771,70.509)
O6: (70.739,47.326,69.228)
O4': (76.250,50.545,71.223)
C8: (74.889,48.238,69.871)
C2: (71.335,48.981,72.312)
C6: (71.386,47.875,70.127)
C5: (72.789,48.107,70.200)
C4: (73.300,48.747,71.310)
P: (80.010,49.180,68.957)
C4': (77.621,50.714,71.682)
C2': (76.782,48.614,72.432)
O2': (76.368,47.894,73.576)
N1: (70.729,48.357,71.252)
N2: (70.525,49.376,73.304)
N3: (72.640,49.203,72.396)
N7: (73.801,47.789,69.305)
N9: (74.656,48.846,71.083)
O5': (78.752,49.473,69.900)
O3': (77.598,50.228,74.028)
C4: (66.168,52.845,72.687)
N3: (66.754,53.343,71.545)
OP1: (72.117,52.604,77.649)
OP2: (70.466,50.697,77.111)
C2: (68.064,53.710,71.383)
C1': (70.284,53.877,72.379)
C3': (71.663,54.766,74.104)
O5': (71.619,51.886,75.291)
O4': (71.061,52.853,72.954)
C5': (72.728,52.480,74.600)
P: (71.731,51.432,76.812)
C4': (72.219,53.450,73.570)
C2': (70.731,55.215,72.979)
O2': (71.396,55.949,71.965)
N1: (68.862,53.539,72.507)
O4: (64.977,52.535,72.666)
O2: (68.485,54.156,70.325)
C6: (68.337,53.061,73.682)
C5: (67.052,52.717,73.808)
O3': (72.738,55.705,74.210)
N3: (66.754,53.343,71.545)
OP1: (72.117,52.604,77.649)
OP2: (70.466,50.697,77.111)
C2: (68.064,53.710,71.383)
C1': (70.284,53.877,72.379)
C3': (71.663,54.766,74.104)
O5': (71.619,51.886,75.291)
O4': (71.061,52.853,72.954)
C5': (72.728,52.480,74.600)
P: (71.731,51.432,76.812)
C4': (72.219,53.450,73.570)
C2': (70.731,55.215,72.979)
O2': (71.396,55.949,71.965)
N1: (68.862,53.539,72.507)
O4: (64.977,52.535,72.666)
O2: (68.485,54.156,70.325)
C6: (68.337,53.061,73.682)
C5: (67.052,52.717,73.808)
O3': (72.738,55.705,74.210)
Image (generated by PyMOL):