Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0517:0600
Extra
PDB:
ATOM 1 O3' G A 516 10.259 140.167 94.513 1.00 49.61 O
ATOM 2 P G A 517 10.516 140.316 96.091 1.00 49.54 P
ATOM 3 OP1 G A 517 9.243 139.934 96.745 1.00 49.90 O
ATOM 4 OP2 G A 517 11.113 141.648 96.374 1.00 49.01 O
ATOM 5 O5' G A 517 11.606 139.195 96.401 1.00 47.23 O
ATOM 6 C5' G A 517 11.269 137.801 96.301 1.00 44.00 C
ATOM 7 C4' G A 517 12.485 136.941 96.532 1.00 41.97 C
ATOM 8 O4' G A 517 13.455 137.172 95.478 1.00 41.24 O
ATOM 9 C3' G A 517 13.299 137.207 97.784 1.00 41.64 C
ATOM 10 O3' G A 517 12.711 136.689 98.968 1.00 42.62 O
ATOM 11 C2' G A 517 14.599 136.501 97.439 1.00 41.67 C
ATOM 12 O2' G A 517 14.511 135.096 97.542 1.00 42.24 O
ATOM 13 C1' G A 517 14.758 136.891 95.970 1.00 41.55 C
ATOM 14 N9 G A 517 15.591 138.089 95.865 1.00 41.67 N
ATOM 15 C8 G A 517 15.182 139.401 95.834 1.00 41.20 C
ATOM 16 N7 G A 517 16.177 140.247 95.830 1.00 40.70 N
ATOM 17 C5 G A 517 17.312 139.447 95.839 1.00 40.36 C
ATOM 18 C6 G A 517 18.683 139.798 95.856 1.00 39.95 C
ATOM 19 O6 G A 517 19.186 140.922 95.872 1.00 40.64 O
ATOM 20 N1 G A 517 19.500 138.674 95.856 1.00 39.67 N
ATOM 21 C2 G A 517 19.058 137.376 95.838 1.00 40.01 C
ATOM 22 N2 G A 517 20.001 136.424 95.811 1.00 39.70 N
ATOM 23 N3 G A 517 17.783 137.035 95.837 1.00 40.55 N
ATOM 24 C4 G A 517 16.970 138.113 95.837 1.00 41.07 C
ATOM 25 P C A 518 12.973 137.426 100.376 1.00 40.74 P
ATOM 26 OP1 C A 518 12.158 136.716 101.388 1.00 41.64 O
ATOM 27 OP2 C A 518 12.802 138.884 100.192 1.00 41.50 O
ATOM 28 O5' C A 518 14.503 137.135 100.696 1.00 41.44 O
TER
ATOM 1 O3' U B 599 19.152 133.505 95.256 1.00 45.82 O
ATOM 2 P U B 600 20.013 132.504 96.171 1.00 47.92 P
ATOM 3 OP1 U B 600 21.184 133.301 96.637 1.00 47.41 O
ATOM 4 OP2 U B 600 20.241 131.232 95.445 1.00 48.29 O
ATOM 5 O5' U B 600 19.060 132.203 97.412 1.00 46.55 O
ATOM 6 C5' U B 600 18.812 133.222 98.393 1.00 46.97 C
ATOM 7 C4' U B 600 17.691 132.820 99.321 1.00 45.92 C
ATOM 8 O4' U B 600 16.481 132.576 98.558 1.00 44.33 O
ATOM 9 C3' U B 600 17.861 131.541 100.122 1.00 45.02 C
ATOM 10 O3' U B 600 18.699 131.725 101.254 1.00 45.18 O
ATOM 11 C2' U B 600 16.424 131.253 100.531 1.00 44.58 C
ATOM 12 O2' U B 600 15.983 132.064 101.603 1.00 42.62 O
ATOM 13 C1' U B 600 15.671 131.643 99.256 1.00 43.81 C
ATOM 14 N1 U B 600 15.426 130.481 98.392 1.00 43.06 N
ATOM 15 C2 U B 600 14.283 129.739 98.630 1.00 43.59 C
ATOM 16 O2 U B 600 13.478 130.014 99.508 1.00 42.93 O
ATOM 17 N3 U B 600 14.115 128.657 97.804 1.00 44.40 N
ATOM 18 C4 U B 600 14.949 128.253 96.786 1.00 43.94 C
ATOM 19 O4 U B 600 14.642 127.271 96.105 1.00 43.90 O
ATOM 20 C5 U B 600 16.106 129.073 96.603 1.00 43.43 C
ATOM 21 C6 U B 600 16.299 130.132 97.390 1.00 43.02 C
ATOM 22 P C B 601 19.210 130.447 102.083 1.00 45.29 P
ATOM 23 OP1 C B 601 20.063 130.964 103.187 1.00 44.91 O
ATOM 24 OP2 C B 601 19.756 129.442 101.148 1.00 44.71 O
ATOM 25 O5' C B 601 17.880 129.860 102.728 1.00 45.54 O
TER
ATOM 2 P G A 517 10.516 140.316 96.091 1.00 49.54 P
ATOM 3 OP1 G A 517 9.243 139.934 96.745 1.00 49.90 O
ATOM 4 OP2 G A 517 11.113 141.648 96.374 1.00 49.01 O
ATOM 5 O5' G A 517 11.606 139.195 96.401 1.00 47.23 O
ATOM 6 C5' G A 517 11.269 137.801 96.301 1.00 44.00 C
ATOM 7 C4' G A 517 12.485 136.941 96.532 1.00 41.97 C
ATOM 8 O4' G A 517 13.455 137.172 95.478 1.00 41.24 O
ATOM 9 C3' G A 517 13.299 137.207 97.784 1.00 41.64 C
ATOM 10 O3' G A 517 12.711 136.689 98.968 1.00 42.62 O
ATOM 11 C2' G A 517 14.599 136.501 97.439 1.00 41.67 C
ATOM 12 O2' G A 517 14.511 135.096 97.542 1.00 42.24 O
ATOM 13 C1' G A 517 14.758 136.891 95.970 1.00 41.55 C
ATOM 14 N9 G A 517 15.591 138.089 95.865 1.00 41.67 N
ATOM 15 C8 G A 517 15.182 139.401 95.834 1.00 41.20 C
ATOM 16 N7 G A 517 16.177 140.247 95.830 1.00 40.70 N
ATOM 17 C5 G A 517 17.312 139.447 95.839 1.00 40.36 C
ATOM 18 C6 G A 517 18.683 139.798 95.856 1.00 39.95 C
ATOM 19 O6 G A 517 19.186 140.922 95.872 1.00 40.64 O
ATOM 20 N1 G A 517 19.500 138.674 95.856 1.00 39.67 N
ATOM 21 C2 G A 517 19.058 137.376 95.838 1.00 40.01 C
ATOM 22 N2 G A 517 20.001 136.424 95.811 1.00 39.70 N
ATOM 23 N3 G A 517 17.783 137.035 95.837 1.00 40.55 N
ATOM 24 C4 G A 517 16.970 138.113 95.837 1.00 41.07 C
ATOM 25 P C A 518 12.973 137.426 100.376 1.00 40.74 P
ATOM 26 OP1 C A 518 12.158 136.716 101.388 1.00 41.64 O
ATOM 27 OP2 C A 518 12.802 138.884 100.192 1.00 41.50 O
ATOM 28 O5' C A 518 14.503 137.135 100.696 1.00 41.44 O
TER
ATOM 1 O3' U B 599 19.152 133.505 95.256 1.00 45.82 O
ATOM 2 P U B 600 20.013 132.504 96.171 1.00 47.92 P
ATOM 3 OP1 U B 600 21.184 133.301 96.637 1.00 47.41 O
ATOM 4 OP2 U B 600 20.241 131.232 95.445 1.00 48.29 O
ATOM 5 O5' U B 600 19.060 132.203 97.412 1.00 46.55 O
ATOM 6 C5' U B 600 18.812 133.222 98.393 1.00 46.97 C
ATOM 7 C4' U B 600 17.691 132.820 99.321 1.00 45.92 C
ATOM 8 O4' U B 600 16.481 132.576 98.558 1.00 44.33 O
ATOM 9 C3' U B 600 17.861 131.541 100.122 1.00 45.02 C
ATOM 10 O3' U B 600 18.699 131.725 101.254 1.00 45.18 O
ATOM 11 C2' U B 600 16.424 131.253 100.531 1.00 44.58 C
ATOM 12 O2' U B 600 15.983 132.064 101.603 1.00 42.62 O
ATOM 13 C1' U B 600 15.671 131.643 99.256 1.00 43.81 C
ATOM 14 N1 U B 600 15.426 130.481 98.392 1.00 43.06 N
ATOM 15 C2 U B 600 14.283 129.739 98.630 1.00 43.59 C
ATOM 16 O2 U B 600 13.478 130.014 99.508 1.00 42.93 O
ATOM 17 N3 U B 600 14.115 128.657 97.804 1.00 44.40 N
ATOM 18 C4 U B 600 14.949 128.253 96.786 1.00 43.94 C
ATOM 19 O4 U B 600 14.642 127.271 96.105 1.00 43.90 O
ATOM 20 C5 U B 600 16.106 129.073 96.603 1.00 43.43 C
ATOM 21 C6 U B 600 16.299 130.132 97.390 1.00 43.02 C
ATOM 22 P C B 601 19.210 130.447 102.083 1.00 45.29 P
ATOM 23 OP1 C B 601 20.063 130.964 103.187 1.00 44.91 O
ATOM 24 OP2 C B 601 19.756 129.442 101.148 1.00 44.71 O
ATOM 25 O5' C B 601 17.880 129.860 102.728 1.00 45.54 O
TER
Atoms:
OP1: (9.243,139.934,96.745)
OP2: (11.113,141.648,96.374)
C3': (13.299,137.207,97.784)
C1': (14.758,136.891,95.970)
C5': (11.269,137.801,96.301)
O6: (19.186,140.922,95.872)
O4': (13.455,137.172,95.478)
C8: (15.182,139.401,95.834)
C2: (19.058,137.376,95.838)
C6: (18.683,139.798,95.856)
C5: (17.312,139.447,95.839)
C4: (16.970,138.113,95.837)
P: (10.516,140.316,96.091)
C4': (12.485,136.941,96.532)
C2': (14.599,136.501,97.439)
O2': (14.511,135.096,97.542)
N1: (19.500,138.674,95.856)
N2: (20.001,136.424,95.811)
N3: (17.783,137.035,95.837)
N7: (16.177,140.247,95.830)
N9: (15.591,138.089,95.865)
O5': (11.606,139.195,96.401)
O3': (12.711,136.689,98.968)
OP2: (11.113,141.648,96.374)
C3': (13.299,137.207,97.784)
C1': (14.758,136.891,95.970)
C5': (11.269,137.801,96.301)
O6: (19.186,140.922,95.872)
O4': (13.455,137.172,95.478)
C8: (15.182,139.401,95.834)
C2: (19.058,137.376,95.838)
C6: (18.683,139.798,95.856)
C5: (17.312,139.447,95.839)
C4: (16.970,138.113,95.837)
P: (10.516,140.316,96.091)
C4': (12.485,136.941,96.532)
C2': (14.599,136.501,97.439)
O2': (14.511,135.096,97.542)
N1: (19.500,138.674,95.856)
N2: (20.001,136.424,95.811)
N3: (17.783,137.035,95.837)
N7: (16.177,140.247,95.830)
N9: (15.591,138.089,95.865)
O5': (11.606,139.195,96.401)
O3': (12.711,136.689,98.968)
C4: (14.949,128.253,96.786)
N3: (14.115,128.657,97.804)
OP1: (21.184,133.301,96.637)
OP2: (20.241,131.232,95.445)
C2: (14.283,129.739,98.630)
C1': (15.671,131.643,99.256)
C3': (17.861,131.541,100.122)
O5': (19.060,132.203,97.412)
O4': (16.481,132.576,98.558)
C5': (18.812,133.222,98.393)
P: (20.013,132.504,96.171)
C4': (17.691,132.820,99.321)
C2': (16.424,131.253,100.531)
O2': (15.983,132.064,101.603)
N1: (15.426,130.481,98.392)
O4: (14.642,127.271,96.105)
O2: (13.478,130.014,99.508)
C6: (16.299,130.132,97.390)
C5: (16.106,129.073,96.603)
O3': (18.699,131.725,101.254)
N3: (14.115,128.657,97.804)
OP1: (21.184,133.301,96.637)
OP2: (20.241,131.232,95.445)
C2: (14.283,129.739,98.630)
C1': (15.671,131.643,99.256)
C3': (17.861,131.541,100.122)
O5': (19.060,132.203,97.412)
O4': (16.481,132.576,98.558)
C5': (18.812,133.222,98.393)
P: (20.013,132.504,96.171)
C4': (17.691,132.820,99.321)
C2': (16.424,131.253,100.531)
O2': (15.983,132.064,101.603)
N1: (15.426,130.481,98.392)
O4: (14.642,127.271,96.105)
O2: (13.478,130.014,99.508)
C6: (16.299,130.132,97.390)
C5: (16.106,129.073,96.603)
O3': (18.699,131.725,101.254)
Image (generated by PyMOL):