ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2GCV:B18:B44

Extra

PDB:
ATOM 1 O3' G A 17 30.512 7.802 13.966 1.00 31.90 O
ATOM 2 P G A 18 29.895 6.453 14.595 1.00 33.45 P
ATOM 3 OP1 G A 18 28.647 6.143 13.846 1.00 36.22 O
ATOM 4 OP2 G A 18 29.847 6.604 16.067 1.00 36.91 O
ATOM 5 O5' G A 18 30.977 5.334 14.259 1.00 32.49 O
ATOM 6 C5' G A 18 31.456 5.160 12.932 1.00 33.00 C
ATOM 7 C4' G A 18 31.916 3.735 12.721 1.00 33.77 C
ATOM 8 O4' G A 18 33.009 3.442 13.622 1.00 33.58 O
ATOM 9 C3' G A 18 30.801 2.749 13.080 1.00 33.40 C
ATOM 10 O3' G A 18 30.823 1.649 12.181 1.00 31.76 O
ATOM 11 C2' G A 18 31.090 2.298 14.507 1.00 33.96 C
ATOM 12 O2' G A 18 30.835 0.924 14.693 1.00 33.89 O
ATOM 13 C1' G A 18 32.600 2.467 14.542 1.00 33.93 C
ATOM 14 N9 G A 18 33.350 2.571 15.781 1.00 32.39 N
ATOM 15 C8 G A 18 32.901 2.859 17.044 1.00 32.42 C
ATOM 16 N7 G A 18 33.845 2.783 17.946 1.00 35.43 N
ATOM 17 C5 G A 18 34.981 2.441 17.224 1.00 31.39 C
ATOM 18 C6 G A 18 36.313 2.214 17.650 1.00 31.62 C
ATOM 19 O6 G A 18 36.775 2.259 18.798 1.00 36.62 O
ATOM 20 N1 G A 18 37.148 1.901 16.576 1.00 32.29 N
ATOM 21 C2 G A 18 36.750 1.815 15.264 1.00 31.71 C
ATOM 22 N2 G A 18 37.701 1.504 14.365 1.00 33.82 N
ATOM 23 N3 G A 18 35.512 2.019 14.859 1.00 31.12 N
ATOM 24 C4 G A 18 34.689 2.325 15.885 1.00 31.58 C
ATOM 25 P C A 19 29.556 1.295 11.300 1.00 31.32 P
ATOM 26 OP1 C A 19 29.916 1.605 9.898 1.00 33.11 O
ATOM 27 OP2 C A 19 28.372 1.939 11.921 1.00 32.47 O
ATOM 28 O5' C A 19 29.443 -0.289 11.429 1.00 31.66 O
TER

ATOM 1 O3' G B 43 39.947 2.943 12.341 1.00 28.96 O
ATOM 2 P U B 44 39.164 2.418 11.031 1.00 29.83 P
ATOM 3 OP1 U B 44 38.603 1.097 11.356 1.00 33.09 O
ATOM 4 OP2 U B 44 40.103 2.548 9.889 1.00 22.51 O
ATOM 5 O5' U B 44 38.014 3.525 10.839 1.00 30.60 O
ATOM 6 C5' U B 44 36.623 3.191 10.724 1.00 32.10 C
ATOM 7 C4' U B 44 35.782 4.146 11.567 1.00 28.40 C
ATOM 8 O4' U B 44 36.209 4.044 12.930 1.00 27.38 O
ATOM 9 C3' U B 44 35.839 5.629 11.193 1.00 25.46 C
ATOM 10 O3' U B 44 34.515 6.083 10.857 1.00 26.25 O
ATOM 11 C2' U B 44 36.125 6.371 12.514 1.00 25.76 C
ATOM 12 O2' U B 44 35.250 7.439 12.776 1.00 23.82 O
ATOM 13 C1' U B 44 35.962 5.266 13.559 1.00 24.07 C
ATOM 14 N1 U B 44 36.715 5.305 14.814 1.00 24.52 N
ATOM 15 C2 U B 44 35.987 5.593 15.953 1.00 25.05 C
ATOM 16 O2 U B 44 34.798 5.870 15.924 1.00 21.05 O
ATOM 17 N3 U B 44 36.699 5.542 17.120 1.00 22.08 N
ATOM 18 C4 U B 44 38.037 5.250 17.261 1.00 25.09 C
ATOM 19 O4 U B 44 38.535 5.238 18.391 1.00 28.48 O
ATOM 20 C5 U B 44 38.727 4.988 16.030 1.00 24.98 C
ATOM 21 C6 U B 44 38.056 5.029 14.876 1.00 21.99 C
ATOM 22 P G B 45 33.787 5.651 9.485 1.00 25.77 P
ATOM 23 OP1 G B 45 32.333 5.816 9.699 1.00 21.48 O
ATOM 24 OP2 G B 45 34.308 4.341 9.003 1.00 26.75 O
ATOM 25 O5' G B 45 34.245 6.780 8.469 1.00 25.45 O
TER

Atoms:
OP1: (28.647,6.143,13.846)
OP2: (29.847,6.604,16.067)
C3': (30.801,2.749,13.080)
C1': (32.600,2.467,14.542)
C5': (31.456,5.160,12.932)
O6: (36.775,2.259,18.798)
O4': (33.009,3.442,13.622)
C8: (32.901,2.859,17.044)
C2: (36.750,1.815,15.264)
C6: (36.313,2.214,17.650)
C5: (34.981,2.441,17.224)
C4: (34.689,2.325,15.885)
P: (29.895,6.453,14.595)
C4': (31.916,3.735,12.721)
C2': (31.090,2.298,14.507)
O2': (30.835,0.924,14.693)
N1: (37.148,1.901,16.576)
N2: (37.701,1.504,14.365)
N3: (35.512,2.019,14.859)
N7: (33.845,2.783,17.946)
N9: (33.350,2.571,15.781)
O5': (30.977,5.334,14.259)
O3': (30.823,1.649,12.181)
C4: (38.037,5.250,17.261)
N3: (36.699,5.542,17.120)
OP1: (38.603,1.097,11.356)
OP2: (40.103,2.548,9.889)
C2: (35.987,5.593,15.953)
C1': (35.962,5.266,13.559)
C3': (35.839,5.629,11.193)
O5': (38.014,3.525,10.839)
O4': (36.209,4.044,12.930)
C5': (36.623,3.191,10.724)
P: (39.164,2.418,11.031)
C4': (35.782,4.146,11.567)
C2': (36.125,6.371,12.514)
O2': (35.250,7.439,12.776)
N1: (36.715,5.305,14.814)
O4: (38.535,5.238,18.391)
O2: (34.798,5.870,15.924)
C6: (38.056,5.029,14.876)
C5: (38.727,4.988,16.030)
O3': (34.515,6.083,10.857)
Image (generated by PyMOL):
PyMOL image
show in jmol