ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A1827:A1834

Extra

PDB:
ATOM 1 O3' G A1826 114.057 -2.722 5.518 1.00 89.54 O
ATOM 2 P U A1827 113.397 -2.814 6.977 1.00 78.36 P
ATOM 3 OP1 U A1827 114.505 -2.906 7.950 1.00 98.69 O
ATOM 4 OP2 U A1827 112.392 -3.905 6.937 1.00 93.43 O
ATOM 5 O5' U A1827 112.663 -1.406 7.121 1.00 95.11 O
ATOM 6 C5' U A1827 113.343 -0.188 6.832 1.00 94.10 C
ATOM 7 C4' U A1827 112.390 0.986 6.804 1.00 94.71 C
ATOM 8 O4' U A1827 111.469 0.848 5.691 1.00 91.49 O
ATOM 9 C3' U A1827 111.490 1.143 8.021 1.00 92.01 C
ATOM 10 O3' U A1827 112.137 1.810 9.091 1.00 94.10 O
ATOM 11 C2' U A1827 110.297 1.908 7.462 1.00 92.52 C
ATOM 12 O2' U A1827 110.590 3.294 7.360 1.00 92.28 O
ATOM 13 C1' U A1827 110.197 1.338 6.051 1.00 93.04 C
ATOM 14 N1 U A1827 109.217 0.231 5.959 1.00 93.44 N
ATOM 15 C2 U A1827 107.866 0.552 5.846 1.00 91.49 C
ATOM 16 O2 U A1827 107.416 1.692 5.827 1.00 86.31 O
ATOM 17 N3 U A1827 107.035 -0.528 5.761 1.00 89.12 N
ATOM 18 C4 U A1827 107.410 -1.849 5.763 1.00 89.82 C
ATOM 19 O4 U A1827 106.534 -2.698 5.674 1.00 95.75 O
ATOM 20 C5 U A1827 108.811 -2.099 5.873 1.00 88.96 C
ATOM 21 C6 U A1827 109.648 -1.070 5.964 1.00 89.09 C
ATOM 22 P A A1828 112.036 1.236 10.579 1.00107.82 P
ATOM 23 OP1 A A1828 113.417 1.141 11.096 1.00 97.46 O
ATOM 24 OP2 A A1828 111.207 0.008 10.520 1.00101.68 O
ATOM 25 O5' A A1828 111.248 2.384 11.349 1.00 98.24 O
TER

ATOM 1 O3' U B1833 102.257 -6.640 9.046 1.00 91.38 O
ATOM 2 P A B1834 102.779 -6.475 7.531 1.00102.93 P
ATOM 3 OP1 A B1834 101.821 -7.196 6.660 1.00 92.45 O
ATOM 4 OP2 A B1834 104.204 -6.876 7.509 1.00 98.76 O
ATOM 5 O5' A B1834 102.661 -4.914 7.278 1.00 88.26 O
ATOM 6 C5' A B1834 101.413 -4.331 6.939 1.00 92.96 C
ATOM 7 C4' A B1834 101.425 -2.844 7.152 1.00 91.75 C
ATOM 8 O4' A B1834 102.346 -2.539 8.227 1.00 90.27 O
ATOM 9 C3' A B1834 101.872 -2.018 5.948 1.00 87.72 C
ATOM 10 O3' A B1834 101.104 -0.831 5.868 1.00 89.52 O
ATOM 11 C2' A B1834 103.312 -1.664 6.271 1.00 87.25 C
ATOM 12 O2' A B1834 103.754 -0.445 5.717 1.00 89.02 O
ATOM 13 C1' A B1834 103.305 -1.605 7.788 1.00 87.90 C
ATOM 14 N9 A B1834 104.586 -1.973 8.357 1.00 93.81 N
ATOM 15 C8 A B1834 105.091 -3.218 8.629 1.00 93.04 C
ATOM 16 N7 A B1834 106.316 -3.166 9.088 1.00 94.58 N
ATOM 17 C5 A B1834 106.610 -1.805 9.084 1.00 94.63 C
ATOM 18 C6 A B1834 107.738 -1.078 9.453 1.00 93.78 C
ATOM 19 N6 A B1834 108.845 -1.650 9.923 1.00 99.13 N
ATOM 20 N1 A B1834 107.686 0.262 9.321 1.00 92.07 N
ATOM 21 C2 A B1834 106.581 0.839 8.852 1.00 88.91 C
ATOM 22 N3 A B1834 105.456 0.264 8.469 1.00 92.07 N
ATOM 23 C4 A B1834 105.554 -1.063 8.621 1.00 93.99 C
ATOM 24 P A B1835 100.020 -0.675 4.715 1.00 89.92 P
ATOM 25 OP1 A B1835 98.780 -1.332 5.201 1.00 96.52 O
ATOM 26 OP2 A B1835 100.646 -1.160 3.466 1.00 90.55 O
ATOM 27 O5' A B1835 99.809 0.898 4.639 1.00 84.38 O
TER

Atoms:
C4: (107.410,-1.849,5.763)
N3: (107.035,-0.528,5.761)
OP1: (114.505,-2.906,7.950)
OP2: (112.392,-3.905,6.937)
C2: (107.866,0.552,5.846)
C1': (110.197,1.338,6.051)
C3': (111.490,1.143,8.021)
O5': (112.663,-1.406,7.121)
O4': (111.469,0.848,5.691)
C5': (113.343,-0.188,6.832)
P: (113.397,-2.814,6.977)
C4': (112.390,0.986,6.804)
C2': (110.297,1.908,7.462)
O2': (110.590,3.294,7.360)
N1: (109.217,0.231,5.959)
O4: (106.534,-2.698,5.674)
O2: (107.416,1.692,5.827)
C6: (109.648,-1.070,5.964)
C5: (108.811,-2.099,5.873)
O3': (112.137,1.810,9.091)
OP1: (101.821,-7.196,6.660)
OP2: (104.204,-6.876,7.509)
C3': (101.872,-2.018,5.948)
C1': (103.305,-1.605,7.788)
C5': (101.413,-4.331,6.939)
O4': (102.346,-2.539,8.227)
C8: (105.091,-3.218,8.629)
O2': (103.754,-0.445,5.717)
C6: (107.738,-1.078,9.453)
C5: (106.610,-1.805,9.084)
C4: (105.554,-1.063,8.621)
P: (102.779,-6.475,7.531)
C4': (101.425,-2.844,7.152)
C2': (103.312,-1.664,6.271)
C2: (106.581,0.839,8.852)
N1: (107.686,0.262,9.321)
N3: (105.456,0.264,8.469)
N6: (108.845,-1.650,9.923)
N7: (106.316,-3.166,9.088)
N9: (104.586,-1.973,8.357)
O5': (102.661,-4.914,7.278)
O3': (101.104,-0.831,5.868)
Image (generated by PyMOL):
PyMOL image
show in jmol