Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A11:A564
Extra
PDB:
ATOM 1 O3' G A 10 -13.571 118.319 209.435 1.00 4.22 O
ATOM 2 P G A 11 -13.482 119.726 210.196 1.00 18.07 P
ATOM 3 OP1 G A 11 -13.365 120.785 209.178 1.00 35.36 O
ATOM 4 OP2 G A 11 -12.445 119.616 211.254 1.00 35.36 O
ATOM 5 O5' G A 11 -14.905 119.847 210.881 1.00 9.03 O
ATOM 6 C5' G A 11 -16.083 119.734 210.096 1.00 9.03 C
ATOM 7 C4' G A 11 -17.300 119.794 210.982 1.00 9.03 C
ATOM 8 O4' G A 11 -17.398 118.593 211.789 1.00 9.03 O
ATOM 9 C3' G A 11 -17.298 120.924 211.992 1.00 9.03 C
ATOM 10 O3' G A 11 -17.748 122.126 211.424 1.00 9.03 O
ATOM 11 C2' G A 11 -18.227 120.414 213.081 1.00 9.03 C
ATOM 12 O2' G A 11 -19.595 120.619 212.807 1.00 9.03 O
ATOM 13 C1' G A 11 -17.901 118.921 213.079 1.00 9.03 C
ATOM 14 N9 G A 11 -16.875 118.618 214.078 1.00 24.41 N
ATOM 15 C8 G A 11 -15.604 118.143 213.867 1.00 24.41 C
ATOM 16 N7 G A 11 -14.929 117.983 214.973 1.00 24.41 N
ATOM 17 C5 G A 11 -15.805 118.378 215.968 1.00 24.41 C
ATOM 18 C6 G A 11 -15.636 118.418 217.355 1.00 24.41 C
ATOM 19 O6 G A 11 -14.649 118.094 218.014 1.00 24.41 O
ATOM 20 N1 G A 11 -16.775 118.894 217.991 1.00 24.41 N
ATOM 21 C2 G A 11 -17.933 119.275 217.358 1.00 24.41 C
ATOM 22 N2 G A 11 -18.927 119.731 218.130 1.00 24.41 N
ATOM 23 N3 G A 11 -18.104 119.220 216.062 1.00 24.41 N
ATOM 24 C4 G A 11 -17.008 118.771 215.432 1.00 24.41 C
ATOM 25 P C A 12 -16.903 123.455 211.661 1.00 18.22 P
ATOM 26 OP1 C A 12 -17.207 124.367 210.533 1.00 33.73 O
ATOM 27 OP2 C A 12 -15.500 123.023 211.897 1.00 33.73 O
ATOM 28 O5' C A 12 -17.525 124.042 213.005 1.00 14.31 O
TER
ATOM 1 O3' U B 563 -21.074 121.440 219.356 1.00 18.79 O
ATOM 2 P U B 564 -22.162 121.054 218.234 1.00 27.74 P
ATOM 3 OP1 U B 564 -21.424 120.419 217.109 1.00102.54 O
ATOM 4 OP2 U B 564 -23.032 122.227 217.966 1.00102.43 O
ATOM 5 O5' U B 564 -23.040 119.935 218.946 1.00 37.68 O
ATOM 6 C5' U B 564 -22.399 118.829 219.602 1.00 37.68 C
ATOM 7 C4' U B 564 -23.420 117.922 220.232 1.00 37.68 C
ATOM 8 O4' U B 564 -24.109 118.616 221.309 1.00 37.68 O
ATOM 9 C3' U B 564 -24.499 117.390 219.297 1.00 37.68 C
ATOM 10 O3' U B 564 -24.759 116.044 219.686 1.00 37.68 O
ATOM 11 C2' U B 564 -25.703 118.271 219.632 1.00 37.68 C
ATOM 12 O2' U B 564 -26.951 117.659 219.390 1.00 37.68 O
ATOM 13 C1' U B 564 -25.499 118.481 221.131 1.00 37.68 C
ATOM 14 N1 U B 564 -26.190 119.620 221.757 1.00104.94 N
ATOM 15 C2 U B 564 -26.758 119.403 223.000 1.00105.00 C
ATOM 16 O2 U B 564 -26.660 118.346 223.601 1.00105.08 O
ATOM 17 N3 U B 564 -27.442 120.470 223.521 1.00104.91 N
ATOM 18 C4 U B 564 -27.607 121.708 222.950 1.00104.87 C
ATOM 19 O4 U B 564 -28.316 122.545 223.518 1.00104.83 O
ATOM 20 C5 U B 564 -26.961 121.868 221.681 1.00104.93 C
ATOM 21 C6 U B 564 -26.291 120.844 221.142 1.00104.90 C
ATOM 22 P G B 565 -24.972 114.911 218.575 1.00 40.54 P
ATOM 23 OP1 G B 565 -23.641 114.313 218.262 1.00 30.14 O
ATOM 24 OP2 G B 565 -25.821 115.468 217.479 1.00 30.14 O
ATOM 25 O5' G B 565 -25.839 113.827 219.339 1.00 51.41 O
TER
ATOM 2 P G A 11 -13.482 119.726 210.196 1.00 18.07 P
ATOM 3 OP1 G A 11 -13.365 120.785 209.178 1.00 35.36 O
ATOM 4 OP2 G A 11 -12.445 119.616 211.254 1.00 35.36 O
ATOM 5 O5' G A 11 -14.905 119.847 210.881 1.00 9.03 O
ATOM 6 C5' G A 11 -16.083 119.734 210.096 1.00 9.03 C
ATOM 7 C4' G A 11 -17.300 119.794 210.982 1.00 9.03 C
ATOM 8 O4' G A 11 -17.398 118.593 211.789 1.00 9.03 O
ATOM 9 C3' G A 11 -17.298 120.924 211.992 1.00 9.03 C
ATOM 10 O3' G A 11 -17.748 122.126 211.424 1.00 9.03 O
ATOM 11 C2' G A 11 -18.227 120.414 213.081 1.00 9.03 C
ATOM 12 O2' G A 11 -19.595 120.619 212.807 1.00 9.03 O
ATOM 13 C1' G A 11 -17.901 118.921 213.079 1.00 9.03 C
ATOM 14 N9 G A 11 -16.875 118.618 214.078 1.00 24.41 N
ATOM 15 C8 G A 11 -15.604 118.143 213.867 1.00 24.41 C
ATOM 16 N7 G A 11 -14.929 117.983 214.973 1.00 24.41 N
ATOM 17 C5 G A 11 -15.805 118.378 215.968 1.00 24.41 C
ATOM 18 C6 G A 11 -15.636 118.418 217.355 1.00 24.41 C
ATOM 19 O6 G A 11 -14.649 118.094 218.014 1.00 24.41 O
ATOM 20 N1 G A 11 -16.775 118.894 217.991 1.00 24.41 N
ATOM 21 C2 G A 11 -17.933 119.275 217.358 1.00 24.41 C
ATOM 22 N2 G A 11 -18.927 119.731 218.130 1.00 24.41 N
ATOM 23 N3 G A 11 -18.104 119.220 216.062 1.00 24.41 N
ATOM 24 C4 G A 11 -17.008 118.771 215.432 1.00 24.41 C
ATOM 25 P C A 12 -16.903 123.455 211.661 1.00 18.22 P
ATOM 26 OP1 C A 12 -17.207 124.367 210.533 1.00 33.73 O
ATOM 27 OP2 C A 12 -15.500 123.023 211.897 1.00 33.73 O
ATOM 28 O5' C A 12 -17.525 124.042 213.005 1.00 14.31 O
TER
ATOM 1 O3' U B 563 -21.074 121.440 219.356 1.00 18.79 O
ATOM 2 P U B 564 -22.162 121.054 218.234 1.00 27.74 P
ATOM 3 OP1 U B 564 -21.424 120.419 217.109 1.00102.54 O
ATOM 4 OP2 U B 564 -23.032 122.227 217.966 1.00102.43 O
ATOM 5 O5' U B 564 -23.040 119.935 218.946 1.00 37.68 O
ATOM 6 C5' U B 564 -22.399 118.829 219.602 1.00 37.68 C
ATOM 7 C4' U B 564 -23.420 117.922 220.232 1.00 37.68 C
ATOM 8 O4' U B 564 -24.109 118.616 221.309 1.00 37.68 O
ATOM 9 C3' U B 564 -24.499 117.390 219.297 1.00 37.68 C
ATOM 10 O3' U B 564 -24.759 116.044 219.686 1.00 37.68 O
ATOM 11 C2' U B 564 -25.703 118.271 219.632 1.00 37.68 C
ATOM 12 O2' U B 564 -26.951 117.659 219.390 1.00 37.68 O
ATOM 13 C1' U B 564 -25.499 118.481 221.131 1.00 37.68 C
ATOM 14 N1 U B 564 -26.190 119.620 221.757 1.00104.94 N
ATOM 15 C2 U B 564 -26.758 119.403 223.000 1.00105.00 C
ATOM 16 O2 U B 564 -26.660 118.346 223.601 1.00105.08 O
ATOM 17 N3 U B 564 -27.442 120.470 223.521 1.00104.91 N
ATOM 18 C4 U B 564 -27.607 121.708 222.950 1.00104.87 C
ATOM 19 O4 U B 564 -28.316 122.545 223.518 1.00104.83 O
ATOM 20 C5 U B 564 -26.961 121.868 221.681 1.00104.93 C
ATOM 21 C6 U B 564 -26.291 120.844 221.142 1.00104.90 C
ATOM 22 P G B 565 -24.972 114.911 218.575 1.00 40.54 P
ATOM 23 OP1 G B 565 -23.641 114.313 218.262 1.00 30.14 O
ATOM 24 OP2 G B 565 -25.821 115.468 217.479 1.00 30.14 O
ATOM 25 O5' G B 565 -25.839 113.827 219.339 1.00 51.41 O
TER
Atoms:
OP1: (-13.365,120.785,209.178)
OP2: (-12.445,119.616,211.254)
C3': (-17.298,120.924,211.992)
C1': (-17.901,118.921,213.079)
C5': (-16.083,119.734,210.096)
O6: (-14.649,118.094,218.014)
O4': (-17.398,118.593,211.789)
C8: (-15.604,118.143,213.867)
C2: (-17.933,119.275,217.358)
C6: (-15.636,118.418,217.355)
C5: (-15.805,118.378,215.968)
C4: (-17.008,118.771,215.432)
P: (-13.482,119.726,210.196)
C4': (-17.300,119.794,210.982)
C2': (-18.227,120.414,213.081)
O2': (-19.595,120.619,212.807)
N1: (-16.775,118.894,217.991)
N2: (-18.927,119.731,218.130)
N3: (-18.104,119.220,216.062)
N7: (-14.929,117.983,214.973)
N9: (-16.875,118.618,214.078)
O5': (-14.905,119.847,210.881)
O3': (-17.748,122.126,211.424)
OP2: (-12.445,119.616,211.254)
C3': (-17.298,120.924,211.992)
C1': (-17.901,118.921,213.079)
C5': (-16.083,119.734,210.096)
O6: (-14.649,118.094,218.014)
O4': (-17.398,118.593,211.789)
C8: (-15.604,118.143,213.867)
C2: (-17.933,119.275,217.358)
C6: (-15.636,118.418,217.355)
C5: (-15.805,118.378,215.968)
C4: (-17.008,118.771,215.432)
P: (-13.482,119.726,210.196)
C4': (-17.300,119.794,210.982)
C2': (-18.227,120.414,213.081)
O2': (-19.595,120.619,212.807)
N1: (-16.775,118.894,217.991)
N2: (-18.927,119.731,218.130)
N3: (-18.104,119.220,216.062)
N7: (-14.929,117.983,214.973)
N9: (-16.875,118.618,214.078)
O5': (-14.905,119.847,210.881)
O3': (-17.748,122.126,211.424)
C4: (-27.607,121.708,222.950)
N3: (-27.442,120.470,223.521)
OP1: (-21.424,120.419,217.109)
OP2: (-23.032,122.227,217.966)
C2: (-26.758,119.403,223.000)
C1': (-25.499,118.481,221.131)
C3': (-24.499,117.390,219.297)
O5': (-23.040,119.935,218.946)
O4': (-24.109,118.616,221.309)
C5': (-22.399,118.829,219.602)
P: (-22.162,121.054,218.234)
C4': (-23.420,117.922,220.232)
C2': (-25.703,118.271,219.632)
O2': (-26.951,117.659,219.390)
N1: (-26.190,119.620,221.757)
O4: (-28.316,122.545,223.518)
O2: (-26.660,118.346,223.601)
C6: (-26.291,120.844,221.142)
C5: (-26.961,121.868,221.681)
O3': (-24.759,116.044,219.686)
N3: (-27.442,120.470,223.521)
OP1: (-21.424,120.419,217.109)
OP2: (-23.032,122.227,217.966)
C2: (-26.758,119.403,223.000)
C1': (-25.499,118.481,221.131)
C3': (-24.499,117.390,219.297)
O5': (-23.040,119.935,218.946)
O4': (-24.109,118.616,221.309)
C5': (-22.399,118.829,219.602)
P: (-22.162,121.054,218.234)
C4': (-23.420,117.922,220.232)
C2': (-25.703,118.271,219.632)
O2': (-26.951,117.659,219.390)
N1: (-26.190,119.620,221.757)
O4: (-28.316,122.545,223.518)
O2: (-26.660,118.346,223.601)
C6: (-26.291,120.844,221.142)
C5: (-26.961,121.868,221.681)
O3': (-24.759,116.044,219.686)
Image (generated by PyMOL):