Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A86:A87
Extra
PDB:
ATOM 1 O3' G A 85 -19.939 -87.747 56.480 1.00 9.10 O
ATOM 2 P U A 86 -20.528 -87.326 55.048 1.00 0.08 P
ATOM 3 OP1 U A 86 -21.884 -86.749 55.283 1.00 0.08 O
ATOM 4 OP2 U A 86 -20.395 -88.502 54.148 1.00 0.08 O
ATOM 5 O5' U A 86 -19.527 -86.195 54.607 1.00 0.08 O
ATOM 6 C5' U A 86 -18.834 -85.456 55.578 1.00 0.08 C
ATOM 7 C4' U A 86 -18.006 -84.414 54.932 1.00 0.08 C
ATOM 8 O4' U A 86 -16.612 -84.755 55.070 1.00 0.08 O
ATOM 9 C3' U A 86 -18.237 -84.280 53.456 1.00 0.08 C
ATOM 10 O3' U A 86 -19.308 -83.418 53.177 1.00 0.08 O
ATOM 11 C2' U A 86 -16.890 -83.811 52.921 1.00 0.08 C
ATOM 12 O2' U A 86 -16.740 -82.393 53.018 1.00 0.08 O
ATOM 13 C1' U A 86 -15.921 -84.493 53.889 1.00 0.08 C
ATOM 14 N1 U A 86 -15.449 -85.767 53.373 1.00 0.08 N
ATOM 15 C2 U A 86 -14.200 -85.821 52.837 1.00 0.08 C
ATOM 16 O2 U A 86 -13.458 -84.867 52.761 1.00 0.08 O
ATOM 17 N3 U A 86 -13.840 -87.040 52.368 1.00 0.08 N
ATOM 18 C4 U A 86 -14.586 -88.188 52.409 1.00 0.08 C
ATOM 19 O4 U A 86 -14.096 -89.213 51.927 1.00 0.08 O
ATOM 20 C5 U A 86 -15.881 -88.059 53.002 1.00 0.08 C
ATOM 21 C6 U A 86 -16.252 -86.865 53.453 1.00 0.08 C
ATOM 22 P G A 87 -19.870 -83.283 51.692 1.00 0.01 P
ATOM 23 OP1 G A 87 -19.831 -84.630 51.052 1.00 0.01 O
ATOM 24 OP2 G A 87 -19.144 -82.151 51.057 1.00 0.01 O
ATOM 25 O5' G A 87 -21.363 -82.874 51.953 1.00 0.01 O
TER
ATOM 1 O3' U B 86 -19.308 -83.418 53.177 1.00 0.08 O
ATOM 2 P G B 87 -19.870 -83.283 51.692 1.00 0.01 P
ATOM 3 OP1 G B 87 -19.831 -84.630 51.052 1.00 0.01 O
ATOM 4 OP2 G B 87 -19.144 -82.151 51.057 1.00 0.01 O
ATOM 5 O5' G B 87 -21.363 -82.874 51.953 1.00 0.01 O
ATOM 6 C5' G B 87 -22.105 -83.457 52.999 1.00 0.01 C
ATOM 7 C4' G B 87 -23.559 -83.404 52.682 1.00 0.01 C
ATOM 8 O4' G B 87 -24.046 -82.051 52.864 1.00 0.01 O
ATOM 9 C3' G B 87 -23.885 -83.710 51.252 1.00 0.01 C
ATOM 10 O3' G B 87 -23.961 -85.076 50.998 1.00 0.01 O
ATOM 11 C2' G B 87 -25.182 -82.968 51.050 1.00 0.01 C
ATOM 12 O2' G B 87 -26.235 -83.620 51.730 1.00 0.01 O
ATOM 13 C1' G B 87 -24.867 -81.692 51.789 1.00 0.01 C
ATOM 14 N9 G B 87 -24.125 -80.760 50.938 1.00 0.01 N
ATOM 15 C8 G B 87 -22.796 -80.459 50.955 1.00 0.01 C
ATOM 16 N7 G B 87 -22.447 -79.598 50.051 1.00 0.01 N
ATOM 17 C5 G B 87 -23.630 -79.327 49.375 1.00 0.01 C
ATOM 18 C6 G B 87 -23.915 -78.474 48.273 1.00 0.01 C
ATOM 19 O6 G B 87 -23.114 -77.756 47.646 1.00 0.01 O
ATOM 20 N1 G B 87 -25.271 -78.523 47.929 1.00 0.01 N
ATOM 21 C2 G B 87 -26.222 -79.281 48.557 1.00 0.01 C
ATOM 22 N2 G B 87 -27.490 -79.230 48.152 1.00 0.01 N
ATOM 23 N3 G B 87 -25.961 -80.075 49.556 1.00 0.01 N
ATOM 24 C4 G B 87 -24.664 -80.049 49.913 1.00 0.01 C
ATOM 25 P A B 88 -23.811 -85.590 49.503 1.00 0.02 P
ATOM 26 OP1 A B 88 -24.253 -87.025 49.501 1.00 0.02 O
ATOM 27 OP2 A B 88 -22.431 -85.247 49.060 1.00 0.02 O
ATOM 28 O5' A B 88 -24.870 -84.702 48.705 1.00 0.02 O
TER
ATOM 2 P U A 86 -20.528 -87.326 55.048 1.00 0.08 P
ATOM 3 OP1 U A 86 -21.884 -86.749 55.283 1.00 0.08 O
ATOM 4 OP2 U A 86 -20.395 -88.502 54.148 1.00 0.08 O
ATOM 5 O5' U A 86 -19.527 -86.195 54.607 1.00 0.08 O
ATOM 6 C5' U A 86 -18.834 -85.456 55.578 1.00 0.08 C
ATOM 7 C4' U A 86 -18.006 -84.414 54.932 1.00 0.08 C
ATOM 8 O4' U A 86 -16.612 -84.755 55.070 1.00 0.08 O
ATOM 9 C3' U A 86 -18.237 -84.280 53.456 1.00 0.08 C
ATOM 10 O3' U A 86 -19.308 -83.418 53.177 1.00 0.08 O
ATOM 11 C2' U A 86 -16.890 -83.811 52.921 1.00 0.08 C
ATOM 12 O2' U A 86 -16.740 -82.393 53.018 1.00 0.08 O
ATOM 13 C1' U A 86 -15.921 -84.493 53.889 1.00 0.08 C
ATOM 14 N1 U A 86 -15.449 -85.767 53.373 1.00 0.08 N
ATOM 15 C2 U A 86 -14.200 -85.821 52.837 1.00 0.08 C
ATOM 16 O2 U A 86 -13.458 -84.867 52.761 1.00 0.08 O
ATOM 17 N3 U A 86 -13.840 -87.040 52.368 1.00 0.08 N
ATOM 18 C4 U A 86 -14.586 -88.188 52.409 1.00 0.08 C
ATOM 19 O4 U A 86 -14.096 -89.213 51.927 1.00 0.08 O
ATOM 20 C5 U A 86 -15.881 -88.059 53.002 1.00 0.08 C
ATOM 21 C6 U A 86 -16.252 -86.865 53.453 1.00 0.08 C
ATOM 22 P G A 87 -19.870 -83.283 51.692 1.00 0.01 P
ATOM 23 OP1 G A 87 -19.831 -84.630 51.052 1.00 0.01 O
ATOM 24 OP2 G A 87 -19.144 -82.151 51.057 1.00 0.01 O
ATOM 25 O5' G A 87 -21.363 -82.874 51.953 1.00 0.01 O
TER
ATOM 1 O3' U B 86 -19.308 -83.418 53.177 1.00 0.08 O
ATOM 2 P G B 87 -19.870 -83.283 51.692 1.00 0.01 P
ATOM 3 OP1 G B 87 -19.831 -84.630 51.052 1.00 0.01 O
ATOM 4 OP2 G B 87 -19.144 -82.151 51.057 1.00 0.01 O
ATOM 5 O5' G B 87 -21.363 -82.874 51.953 1.00 0.01 O
ATOM 6 C5' G B 87 -22.105 -83.457 52.999 1.00 0.01 C
ATOM 7 C4' G B 87 -23.559 -83.404 52.682 1.00 0.01 C
ATOM 8 O4' G B 87 -24.046 -82.051 52.864 1.00 0.01 O
ATOM 9 C3' G B 87 -23.885 -83.710 51.252 1.00 0.01 C
ATOM 10 O3' G B 87 -23.961 -85.076 50.998 1.00 0.01 O
ATOM 11 C2' G B 87 -25.182 -82.968 51.050 1.00 0.01 C
ATOM 12 O2' G B 87 -26.235 -83.620 51.730 1.00 0.01 O
ATOM 13 C1' G B 87 -24.867 -81.692 51.789 1.00 0.01 C
ATOM 14 N9 G B 87 -24.125 -80.760 50.938 1.00 0.01 N
ATOM 15 C8 G B 87 -22.796 -80.459 50.955 1.00 0.01 C
ATOM 16 N7 G B 87 -22.447 -79.598 50.051 1.00 0.01 N
ATOM 17 C5 G B 87 -23.630 -79.327 49.375 1.00 0.01 C
ATOM 18 C6 G B 87 -23.915 -78.474 48.273 1.00 0.01 C
ATOM 19 O6 G B 87 -23.114 -77.756 47.646 1.00 0.01 O
ATOM 20 N1 G B 87 -25.271 -78.523 47.929 1.00 0.01 N
ATOM 21 C2 G B 87 -26.222 -79.281 48.557 1.00 0.01 C
ATOM 22 N2 G B 87 -27.490 -79.230 48.152 1.00 0.01 N
ATOM 23 N3 G B 87 -25.961 -80.075 49.556 1.00 0.01 N
ATOM 24 C4 G B 87 -24.664 -80.049 49.913 1.00 0.01 C
ATOM 25 P A B 88 -23.811 -85.590 49.503 1.00 0.02 P
ATOM 26 OP1 A B 88 -24.253 -87.025 49.501 1.00 0.02 O
ATOM 27 OP2 A B 88 -22.431 -85.247 49.060 1.00 0.02 O
ATOM 28 O5' A B 88 -24.870 -84.702 48.705 1.00 0.02 O
TER
Atoms:
C4: (-14.586,-88.188,52.409)
N3: (-13.840,-87.040,52.368)
OP1: (-21.884,-86.749,55.283)
OP2: (-20.395,-88.502,54.148)
C2: (-14.200,-85.821,52.837)
C1': (-15.921,-84.493,53.889)
C3': (-18.237,-84.280,53.456)
O5': (-19.527,-86.195,54.607)
O4': (-16.612,-84.755,55.070)
C5': (-18.834,-85.456,55.578)
P: (-20.528,-87.326,55.048)
C4': (-18.006,-84.414,54.932)
C2': (-16.890,-83.811,52.921)
O2': (-16.740,-82.393,53.018)
N1: (-15.449,-85.767,53.373)
O4: (-14.096,-89.213,51.927)
O2: (-13.458,-84.867,52.761)
C6: (-16.252,-86.865,53.453)
C5: (-15.881,-88.059,53.002)
O3': (-19.308,-83.418,53.177)
N3: (-13.840,-87.040,52.368)
OP1: (-21.884,-86.749,55.283)
OP2: (-20.395,-88.502,54.148)
C2: (-14.200,-85.821,52.837)
C1': (-15.921,-84.493,53.889)
C3': (-18.237,-84.280,53.456)
O5': (-19.527,-86.195,54.607)
O4': (-16.612,-84.755,55.070)
C5': (-18.834,-85.456,55.578)
P: (-20.528,-87.326,55.048)
C4': (-18.006,-84.414,54.932)
C2': (-16.890,-83.811,52.921)
O2': (-16.740,-82.393,53.018)
N1: (-15.449,-85.767,53.373)
O4: (-14.096,-89.213,51.927)
O2: (-13.458,-84.867,52.761)
C6: (-16.252,-86.865,53.453)
C5: (-15.881,-88.059,53.002)
O3': (-19.308,-83.418,53.177)
OP1: (-19.831,-84.630,51.052)
OP2: (-19.144,-82.151,51.057)
C3': (-23.885,-83.710,51.252)
C1': (-24.867,-81.692,51.789)
C5': (-22.105,-83.457,52.999)
O6: (-23.114,-77.756,47.646)
O4': (-24.046,-82.051,52.864)
C8: (-22.796,-80.459,50.955)
C2: (-26.222,-79.281,48.557)
C6: (-23.915,-78.474,48.273)
C5: (-23.630,-79.327,49.375)
C4: (-24.664,-80.049,49.913)
P: (-19.870,-83.283,51.692)
C4': (-23.559,-83.404,52.682)
C2': (-25.182,-82.968,51.050)
O2': (-26.235,-83.620,51.730)
N1: (-25.271,-78.523,47.929)
N2: (-27.490,-79.230,48.152)
N3: (-25.961,-80.075,49.556)
N7: (-22.447,-79.598,50.051)
N9: (-24.125,-80.760,50.938)
O5': (-21.363,-82.874,51.953)
O3': (-23.961,-85.076,50.998)
OP2: (-19.144,-82.151,51.057)
C3': (-23.885,-83.710,51.252)
C1': (-24.867,-81.692,51.789)
C5': (-22.105,-83.457,52.999)
O6: (-23.114,-77.756,47.646)
O4': (-24.046,-82.051,52.864)
C8: (-22.796,-80.459,50.955)
C2: (-26.222,-79.281,48.557)
C6: (-23.915,-78.474,48.273)
C5: (-23.630,-79.327,49.375)
C4: (-24.664,-80.049,49.913)
P: (-19.870,-83.283,51.692)
C4': (-23.559,-83.404,52.682)
C2': (-25.182,-82.968,51.050)
O2': (-26.235,-83.620,51.730)
N1: (-25.271,-78.523,47.929)
N2: (-27.490,-79.230,48.152)
N3: (-25.961,-80.075,49.556)
N7: (-22.447,-79.598,50.051)
N9: (-24.125,-80.760,50.938)
O5': (-21.363,-82.874,51.953)
O3': (-23.961,-85.076,50.998)
Image (generated by PyMOL):