Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A11:A564
Extra
PDB:
ATOM 1 O3' G A 10 -68.215 -97.464 2.853 1.00 0.79 O
ATOM 2 P G A 11 -68.156 -98.263 4.233 1.00 27.15 P
ATOM 3 OP1 G A 11 -68.031 -97.285 5.341 1.00 44.44 O
ATOM 4 OP2 G A 11 -67.140 -99.330 4.083 1.00 44.44 O
ATOM 5 O5' G A 11 -69.595 -98.929 4.319 1.00 7.62 O
ATOM 6 C5' G A 11 -70.765 -98.119 4.261 1.00 7.62 C
ATOM 7 C4' G A 11 -71.995 -98.987 4.296 1.00 7.62 C
ATOM 8 O4' G A 11 -72.091 -99.751 3.075 1.00 7.62 O
ATOM 9 C3' G A 11 -72.016-100.031 5.388 1.00 7.62 C
ATOM 10 O3' G A 11 -72.456 -99.485 6.609 1.00 7.62 O
ATOM 11 C2' G A 11 -72.962-101.078 4.830 1.00 7.62 C
ATOM 12 O2' G A 11 -74.323-100.757 4.978 1.00 7.62 O
ATOM 13 C1' G A 11 -72.621-101.033 3.349 1.00 7.62 C
ATOM 14 N9 G A 11 -71.611-102.035 3.015 1.00 37.23 N
ATOM 15 C8 G A 11 -70.330-101.830 2.545 1.00 37.23 C
ATOM 16 N7 G A 11 -69.673-102.942 2.350 1.00 37.23 N
ATOM 17 C5 G A 11 -70.571-103.939 2.716 1.00 37.23 C
ATOM 18 C6 G A 11 -70.423-105.337 2.737 1.00 37.23 C
ATOM 19 O6 G A 11 -69.450-106.005 2.402 1.00 37.23 O
ATOM 20 N1 G A 11 -71.568-105.966 3.209 1.00 37.23 N
ATOM 21 C2 G A 11 -72.717-105.326 3.599 1.00 37.23 C
ATOM 22 N2 G A 11 -73.722-106.091 4.039 1.00 37.23 N
ATOM 23 N3 G A 11 -72.875-104.026 3.566 1.00 37.23 N
ATOM 24 C4 G A 11 -71.768-103.396 3.125 1.00 37.23 C
ATOM 25 P C A 12 -71.635 -99.806 7.939 1.00 31.79 P
ATOM 26 OP1 C A 12 -71.925 -98.717 8.903 1.00 47.30 O
ATOM 27 OP2 C A 12 -70.229-100.086 7.532 1.00 47.30 O
ATOM 28 O5' C A 12 -72.295-101.142 8.478 1.00 17.27 O
TER
ATOM 1 O3' U B 563 -75.888-107.357 5.672 1.00 7.42 O
ATOM 2 P U B 564 -76.955-106.214 5.314 1.00 19.50 P
ATOM 3 OP1 U B 564 -76.204-105.081 4.710 1.00 94.30 O
ATOM 4 OP2 U B 564 -77.828-105.964 6.497 1.00 94.19 O
ATOM 5 O5' U B 564 -77.843-106.887 4.178 1.00 51.69 O
ATOM 6 C5' U B 564 -77.214-107.512 3.049 1.00 51.69 C
ATOM 7 C4' U B 564 -78.244-108.100 2.123 1.00 51.69 C
ATOM 8 O4' U B 564 -78.944-109.187 2.787 1.00 51.69 O
ATOM 9 C3' U B 564 -79.312-107.137 1.612 1.00 51.69 C
ATOM 10 O3' U B 564 -79.580-107.473 0.257 1.00 51.69 O
ATOM 11 C2' U B 564 -80.525-107.479 2.475 1.00 51.69 C
ATOM 12 O2' U B 564 -81.767-107.171 1.867 1.00 51.69 O
ATOM 13 C1' U B 564 -80.335-108.988 2.657 1.00 51.69 C
ATOM 14 N1 U B 564 -81.034-109.638 3.781 1.00 61.27 N
ATOM 15 C2 U B 564 -81.625-110.870 3.533 1.00 61.33 C
ATOM 16 O2 U B 564 -81.539-111.449 2.465 1.00 61.41 O
ATOM 17 N3 U B 564 -82.321-111.403 4.582 1.00 61.24 N
ATOM 18 C4 U B 564 -82.483-110.856 5.832 1.00 61.20 C
ATOM 19 O4 U B 564 -83.217-111.422 6.648 1.00 61.16 O
ATOM 20 C5 U B 564 -81.814-109.605 6.029 1.00 61.26 C
ATOM 21 C6 U B 564 -81.128-109.054 5.024 1.00 61.23 C
ATOM 22 P G B 565 -79.786-106.315 -0.837 1.00 27.79 P
ATOM 23 OP1 G B 565 -78.448-105.990 -1.418 1.00 17.39 O
ATOM 24 OP2 G B 565 -80.644-105.236 -0.253 1.00 17.39 O
ATOM 25 O5' G B 565 -80.657-107.029 -1.948 1.00 55.31 O
TER
ATOM 2 P G A 11 -68.156 -98.263 4.233 1.00 27.15 P
ATOM 3 OP1 G A 11 -68.031 -97.285 5.341 1.00 44.44 O
ATOM 4 OP2 G A 11 -67.140 -99.330 4.083 1.00 44.44 O
ATOM 5 O5' G A 11 -69.595 -98.929 4.319 1.00 7.62 O
ATOM 6 C5' G A 11 -70.765 -98.119 4.261 1.00 7.62 C
ATOM 7 C4' G A 11 -71.995 -98.987 4.296 1.00 7.62 C
ATOM 8 O4' G A 11 -72.091 -99.751 3.075 1.00 7.62 O
ATOM 9 C3' G A 11 -72.016-100.031 5.388 1.00 7.62 C
ATOM 10 O3' G A 11 -72.456 -99.485 6.609 1.00 7.62 O
ATOM 11 C2' G A 11 -72.962-101.078 4.830 1.00 7.62 C
ATOM 12 O2' G A 11 -74.323-100.757 4.978 1.00 7.62 O
ATOM 13 C1' G A 11 -72.621-101.033 3.349 1.00 7.62 C
ATOM 14 N9 G A 11 -71.611-102.035 3.015 1.00 37.23 N
ATOM 15 C8 G A 11 -70.330-101.830 2.545 1.00 37.23 C
ATOM 16 N7 G A 11 -69.673-102.942 2.350 1.00 37.23 N
ATOM 17 C5 G A 11 -70.571-103.939 2.716 1.00 37.23 C
ATOM 18 C6 G A 11 -70.423-105.337 2.737 1.00 37.23 C
ATOM 19 O6 G A 11 -69.450-106.005 2.402 1.00 37.23 O
ATOM 20 N1 G A 11 -71.568-105.966 3.209 1.00 37.23 N
ATOM 21 C2 G A 11 -72.717-105.326 3.599 1.00 37.23 C
ATOM 22 N2 G A 11 -73.722-106.091 4.039 1.00 37.23 N
ATOM 23 N3 G A 11 -72.875-104.026 3.566 1.00 37.23 N
ATOM 24 C4 G A 11 -71.768-103.396 3.125 1.00 37.23 C
ATOM 25 P C A 12 -71.635 -99.806 7.939 1.00 31.79 P
ATOM 26 OP1 C A 12 -71.925 -98.717 8.903 1.00 47.30 O
ATOM 27 OP2 C A 12 -70.229-100.086 7.532 1.00 47.30 O
ATOM 28 O5' C A 12 -72.295-101.142 8.478 1.00 17.27 O
TER
ATOM 1 O3' U B 563 -75.888-107.357 5.672 1.00 7.42 O
ATOM 2 P U B 564 -76.955-106.214 5.314 1.00 19.50 P
ATOM 3 OP1 U B 564 -76.204-105.081 4.710 1.00 94.30 O
ATOM 4 OP2 U B 564 -77.828-105.964 6.497 1.00 94.19 O
ATOM 5 O5' U B 564 -77.843-106.887 4.178 1.00 51.69 O
ATOM 6 C5' U B 564 -77.214-107.512 3.049 1.00 51.69 C
ATOM 7 C4' U B 564 -78.244-108.100 2.123 1.00 51.69 C
ATOM 8 O4' U B 564 -78.944-109.187 2.787 1.00 51.69 O
ATOM 9 C3' U B 564 -79.312-107.137 1.612 1.00 51.69 C
ATOM 10 O3' U B 564 -79.580-107.473 0.257 1.00 51.69 O
ATOM 11 C2' U B 564 -80.525-107.479 2.475 1.00 51.69 C
ATOM 12 O2' U B 564 -81.767-107.171 1.867 1.00 51.69 O
ATOM 13 C1' U B 564 -80.335-108.988 2.657 1.00 51.69 C
ATOM 14 N1 U B 564 -81.034-109.638 3.781 1.00 61.27 N
ATOM 15 C2 U B 564 -81.625-110.870 3.533 1.00 61.33 C
ATOM 16 O2 U B 564 -81.539-111.449 2.465 1.00 61.41 O
ATOM 17 N3 U B 564 -82.321-111.403 4.582 1.00 61.24 N
ATOM 18 C4 U B 564 -82.483-110.856 5.832 1.00 61.20 C
ATOM 19 O4 U B 564 -83.217-111.422 6.648 1.00 61.16 O
ATOM 20 C5 U B 564 -81.814-109.605 6.029 1.00 61.26 C
ATOM 21 C6 U B 564 -81.128-109.054 5.024 1.00 61.23 C
ATOM 22 P G B 565 -79.786-106.315 -0.837 1.00 27.79 P
ATOM 23 OP1 G B 565 -78.448-105.990 -1.418 1.00 17.39 O
ATOM 24 OP2 G B 565 -80.644-105.236 -0.253 1.00 17.39 O
ATOM 25 O5' G B 565 -80.657-107.029 -1.948 1.00 55.31 O
TER
Atoms:
OP1: (-68.031,-97.285,5.341)
OP2: (-67.140,-99.330,4.083)
C3': (-72.016,-100.031,5.388)
C1': (-72.621,-101.033,3.349)
C5': (-70.765,-98.119,4.261)
O6: (-69.450,-106.005,2.402)
O4': (-72.091,-99.751,3.075)
C8: (-70.330,-101.830,2.545)
C2: (-72.717,-105.326,3.599)
C6: (-70.423,-105.337,2.737)
C5: (-70.571,-103.939,2.716)
C4: (-71.768,-103.396,3.125)
P: (-68.156,-98.263,4.233)
C4': (-71.995,-98.987,4.296)
C2': (-72.962,-101.078,4.830)
O2': (-74.323,-100.757,4.978)
N1: (-71.568,-105.966,3.209)
N2: (-73.722,-106.091,4.039)
N3: (-72.875,-104.026,3.566)
N7: (-69.673,-102.942,2.350)
N9: (-71.611,-102.035,3.015)
O5': (-69.595,-98.929,4.319)
O3': (-72.456,-99.485,6.609)
OP2: (-67.140,-99.330,4.083)
C3': (-72.016,-100.031,5.388)
C1': (-72.621,-101.033,3.349)
C5': (-70.765,-98.119,4.261)
O6: (-69.450,-106.005,2.402)
O4': (-72.091,-99.751,3.075)
C8: (-70.330,-101.830,2.545)
C2: (-72.717,-105.326,3.599)
C6: (-70.423,-105.337,2.737)
C5: (-70.571,-103.939,2.716)
C4: (-71.768,-103.396,3.125)
P: (-68.156,-98.263,4.233)
C4': (-71.995,-98.987,4.296)
C2': (-72.962,-101.078,4.830)
O2': (-74.323,-100.757,4.978)
N1: (-71.568,-105.966,3.209)
N2: (-73.722,-106.091,4.039)
N3: (-72.875,-104.026,3.566)
N7: (-69.673,-102.942,2.350)
N9: (-71.611,-102.035,3.015)
O5': (-69.595,-98.929,4.319)
O3': (-72.456,-99.485,6.609)
C4: (-82.483,-110.856,5.832)
N3: (-82.321,-111.403,4.582)
OP1: (-76.204,-105.081,4.710)
OP2: (-77.828,-105.964,6.497)
C2: (-81.625,-110.870,3.533)
C1': (-80.335,-108.988,2.657)
C3': (-79.312,-107.137,1.612)
O5': (-77.843,-106.887,4.178)
O4': (-78.944,-109.187,2.787)
C5': (-77.214,-107.512,3.049)
P: (-76.955,-106.214,5.314)
C4': (-78.244,-108.100,2.123)
C2': (-80.525,-107.479,2.475)
O2': (-81.767,-107.171,1.867)
N1: (-81.034,-109.638,3.781)
O4: (-83.217,-111.422,6.648)
O2: (-81.539,-111.449,2.465)
C6: (-81.128,-109.054,5.024)
C5: (-81.814,-109.605,6.029)
O3': (-79.580,-107.473,0.257)
N3: (-82.321,-111.403,4.582)
OP1: (-76.204,-105.081,4.710)
OP2: (-77.828,-105.964,6.497)
C2: (-81.625,-110.870,3.533)
C1': (-80.335,-108.988,2.657)
C3': (-79.312,-107.137,1.612)
O5': (-77.843,-106.887,4.178)
O4': (-78.944,-109.187,2.787)
C5': (-77.214,-107.512,3.049)
P: (-76.955,-106.214,5.314)
C4': (-78.244,-108.100,2.123)
C2': (-80.525,-107.479,2.475)
O2': (-81.767,-107.171,1.867)
N1: (-81.034,-109.638,3.781)
O4: (-83.217,-111.422,6.648)
O2: (-81.539,-111.449,2.465)
C6: (-81.128,-109.054,5.024)
C5: (-81.814,-109.605,6.029)
O3': (-79.580,-107.473,0.257)
Image (generated by PyMOL):