Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A1504:A1505
Extra
PDB:
ATOM 1 O3' G A1503 -93.205 24.849 6.016 1.00 12.46 O
ATOM 2 P U A1504 -91.934 23.870 6.194 1.00 6.54 P
ATOM 3 OP1 U A1504 -92.036 22.819 5.120 1.00 6.54 O
ATOM 4 OP2 U A1504 -91.909 23.437 7.617 1.00 6.54 O
ATOM 5 O5' U A1504 -90.710 24.844 5.915 1.00 6.54 O
ATOM 6 C5' U A1504 -90.439 25.917 6.797 1.00 6.54 C
ATOM 7 C4' U A1504 -88.995 25.954 7.196 1.00 6.54 C
ATOM 8 O4' U A1504 -88.550 24.614 7.510 1.00 6.54 O
ATOM 9 C3' U A1504 -88.038 26.472 6.135 1.00 6.54 C
ATOM 10 O3' U A1504 -87.011 27.199 6.768 1.00 6.54 O
ATOM 11 C2' U A1504 -87.445 25.202 5.555 1.00 6.54 C
ATOM 12 O2' U A1504 -86.169 25.360 4.984 1.00 6.54 O
ATOM 13 C1' U A1504 -87.378 24.332 6.781 1.00 6.54 C
ATOM 14 N1 U A1504 -87.324 22.890 6.481 1.00 6.98 N
ATOM 15 C2 U A1504 -86.190 22.243 6.885 1.00 6.98 C
ATOM 16 O2 U A1504 -85.307 22.849 7.475 1.00 6.98 O
ATOM 17 N3 U A1504 -86.139 20.906 6.602 1.00 6.98 N
ATOM 18 C4 U A1504 -87.090 20.176 5.950 1.00 6.98 C
ATOM 19 O4 U A1504 -86.909 18.979 5.748 1.00 6.98 O
ATOM 20 C5 U A1504 -88.236 20.910 5.545 1.00 6.98 C
ATOM 21 C6 U A1504 -88.304 22.217 5.810 1.00 6.98 C
ATOM 22 P A A1505 -86.702 28.709 6.343 1.00 0.24 P
ATOM 23 OP1 A A1505 -85.273 28.954 6.654 1.00 0.24 O
ATOM 24 OP2 A A1505 -87.720 29.552 6.998 1.00 0.24 O
ATOM 25 O5' A A1505 -86.913 28.717 4.755 1.00 0.24 O
TER
ATOM 1 O3' U B1504 -87.011 27.199 6.768 1.00 6.54 O
ATOM 2 P A B1505 -86.702 28.709 6.343 1.00 0.24 P
ATOM 3 OP1 A B1505 -85.273 28.954 6.654 1.00 0.24 O
ATOM 4 OP2 A B1505 -87.720 29.552 6.998 1.00 0.24 O
ATOM 5 O5' A B1505 -86.913 28.717 4.755 1.00 0.24 O
ATOM 6 C5' A B1505 -85.777 28.692 3.909 1.00 0.24 C
ATOM 7 C4' A B1505 -86.061 29.141 2.497 1.00 0.24 C
ATOM 8 O4' A B1505 -85.691 30.542 2.357 1.00 0.24 O
ATOM 9 C3' A B1505 -85.222 28.423 1.442 1.00 0.24 C
ATOM 10 O3' A B1505 -85.818 27.240 0.958 1.00 0.24 O
ATOM 11 C2' A B1505 -84.962 29.477 0.381 1.00 0.24 C
ATOM 12 O2' A B1505 -86.084 29.627 -0.467 1.00 0.24 O
ATOM 13 C1' A B1505 -84.829 30.718 1.247 1.00 0.24 C
ATOM 14 N9 A B1505 -83.439 30.895 1.753 1.00 0.06 N
ATOM 15 C8 A B1505 -83.032 30.744 3.054 1.00 0.06 C
ATOM 16 N7 A B1505 -81.756 30.943 3.251 1.00 0.06 N
ATOM 17 C5 A B1505 -81.263 31.262 2.009 1.00 0.06 C
ATOM 18 C6 A B1505 -79.968 31.587 1.585 1.00 0.06 C
ATOM 19 N6 A B1505 -78.900 31.630 2.358 1.00 0.06 N
ATOM 20 N1 A B1505 -79.794 31.872 0.298 1.00 0.06 N
ATOM 21 C2 A B1505 -80.866 31.814 -0.507 1.00 0.06 C
ATOM 22 N3 A B1505 -82.140 31.507 -0.231 1.00 0.06 N
ATOM 23 C4 A B1505 -82.283 31.237 1.075 1.00 0.06 C
ATOM 24 P A B1506 -84.897 25.970 0.700 1.00 7.62 P
ATOM 25 OP1 A B1506 -85.790 24.800 0.504 1.00 7.62 O
ATOM 26 OP2 A B1506 -83.899 25.936 1.801 1.00 7.62 O
ATOM 27 O5' A B1506 -84.194 26.353 -0.668 1.00 7.62 O
TER
ATOM 2 P U A1504 -91.934 23.870 6.194 1.00 6.54 P
ATOM 3 OP1 U A1504 -92.036 22.819 5.120 1.00 6.54 O
ATOM 4 OP2 U A1504 -91.909 23.437 7.617 1.00 6.54 O
ATOM 5 O5' U A1504 -90.710 24.844 5.915 1.00 6.54 O
ATOM 6 C5' U A1504 -90.439 25.917 6.797 1.00 6.54 C
ATOM 7 C4' U A1504 -88.995 25.954 7.196 1.00 6.54 C
ATOM 8 O4' U A1504 -88.550 24.614 7.510 1.00 6.54 O
ATOM 9 C3' U A1504 -88.038 26.472 6.135 1.00 6.54 C
ATOM 10 O3' U A1504 -87.011 27.199 6.768 1.00 6.54 O
ATOM 11 C2' U A1504 -87.445 25.202 5.555 1.00 6.54 C
ATOM 12 O2' U A1504 -86.169 25.360 4.984 1.00 6.54 O
ATOM 13 C1' U A1504 -87.378 24.332 6.781 1.00 6.54 C
ATOM 14 N1 U A1504 -87.324 22.890 6.481 1.00 6.98 N
ATOM 15 C2 U A1504 -86.190 22.243 6.885 1.00 6.98 C
ATOM 16 O2 U A1504 -85.307 22.849 7.475 1.00 6.98 O
ATOM 17 N3 U A1504 -86.139 20.906 6.602 1.00 6.98 N
ATOM 18 C4 U A1504 -87.090 20.176 5.950 1.00 6.98 C
ATOM 19 O4 U A1504 -86.909 18.979 5.748 1.00 6.98 O
ATOM 20 C5 U A1504 -88.236 20.910 5.545 1.00 6.98 C
ATOM 21 C6 U A1504 -88.304 22.217 5.810 1.00 6.98 C
ATOM 22 P A A1505 -86.702 28.709 6.343 1.00 0.24 P
ATOM 23 OP1 A A1505 -85.273 28.954 6.654 1.00 0.24 O
ATOM 24 OP2 A A1505 -87.720 29.552 6.998 1.00 0.24 O
ATOM 25 O5' A A1505 -86.913 28.717 4.755 1.00 0.24 O
TER
ATOM 1 O3' U B1504 -87.011 27.199 6.768 1.00 6.54 O
ATOM 2 P A B1505 -86.702 28.709 6.343 1.00 0.24 P
ATOM 3 OP1 A B1505 -85.273 28.954 6.654 1.00 0.24 O
ATOM 4 OP2 A B1505 -87.720 29.552 6.998 1.00 0.24 O
ATOM 5 O5' A B1505 -86.913 28.717 4.755 1.00 0.24 O
ATOM 6 C5' A B1505 -85.777 28.692 3.909 1.00 0.24 C
ATOM 7 C4' A B1505 -86.061 29.141 2.497 1.00 0.24 C
ATOM 8 O4' A B1505 -85.691 30.542 2.357 1.00 0.24 O
ATOM 9 C3' A B1505 -85.222 28.423 1.442 1.00 0.24 C
ATOM 10 O3' A B1505 -85.818 27.240 0.958 1.00 0.24 O
ATOM 11 C2' A B1505 -84.962 29.477 0.381 1.00 0.24 C
ATOM 12 O2' A B1505 -86.084 29.627 -0.467 1.00 0.24 O
ATOM 13 C1' A B1505 -84.829 30.718 1.247 1.00 0.24 C
ATOM 14 N9 A B1505 -83.439 30.895 1.753 1.00 0.06 N
ATOM 15 C8 A B1505 -83.032 30.744 3.054 1.00 0.06 C
ATOM 16 N7 A B1505 -81.756 30.943 3.251 1.00 0.06 N
ATOM 17 C5 A B1505 -81.263 31.262 2.009 1.00 0.06 C
ATOM 18 C6 A B1505 -79.968 31.587 1.585 1.00 0.06 C
ATOM 19 N6 A B1505 -78.900 31.630 2.358 1.00 0.06 N
ATOM 20 N1 A B1505 -79.794 31.872 0.298 1.00 0.06 N
ATOM 21 C2 A B1505 -80.866 31.814 -0.507 1.00 0.06 C
ATOM 22 N3 A B1505 -82.140 31.507 -0.231 1.00 0.06 N
ATOM 23 C4 A B1505 -82.283 31.237 1.075 1.00 0.06 C
ATOM 24 P A B1506 -84.897 25.970 0.700 1.00 7.62 P
ATOM 25 OP1 A B1506 -85.790 24.800 0.504 1.00 7.62 O
ATOM 26 OP2 A B1506 -83.899 25.936 1.801 1.00 7.62 O
ATOM 27 O5' A B1506 -84.194 26.353 -0.668 1.00 7.62 O
TER
Atoms:
C4: (-87.090,20.176,5.950)
N3: (-86.139,20.906,6.602)
OP1: (-92.036,22.819,5.120)
OP2: (-91.909,23.437,7.617)
C2: (-86.190,22.243,6.885)
C1': (-87.378,24.332,6.781)
C3': (-88.038,26.472,6.135)
O5': (-90.710,24.844,5.915)
O4': (-88.550,24.614,7.510)
C5': (-90.439,25.917,6.797)
P: (-91.934,23.870,6.194)
C4': (-88.995,25.954,7.196)
C2': (-87.445,25.202,5.555)
O2': (-86.169,25.360,4.984)
N1: (-87.324,22.890,6.481)
O4: (-86.909,18.979,5.748)
O2: (-85.307,22.849,7.475)
C6: (-88.304,22.217,5.810)
C5: (-88.236,20.910,5.545)
O3': (-87.011,27.199,6.768)
N3: (-86.139,20.906,6.602)
OP1: (-92.036,22.819,5.120)
OP2: (-91.909,23.437,7.617)
C2: (-86.190,22.243,6.885)
C1': (-87.378,24.332,6.781)
C3': (-88.038,26.472,6.135)
O5': (-90.710,24.844,5.915)
O4': (-88.550,24.614,7.510)
C5': (-90.439,25.917,6.797)
P: (-91.934,23.870,6.194)
C4': (-88.995,25.954,7.196)
C2': (-87.445,25.202,5.555)
O2': (-86.169,25.360,4.984)
N1: (-87.324,22.890,6.481)
O4: (-86.909,18.979,5.748)
O2: (-85.307,22.849,7.475)
C6: (-88.304,22.217,5.810)
C5: (-88.236,20.910,5.545)
O3': (-87.011,27.199,6.768)
OP1: (-85.273,28.954,6.654)
OP2: (-87.720,29.552,6.998)
C3': (-85.222,28.423,1.442)
C1': (-84.829,30.718,1.247)
C5': (-85.777,28.692,3.909)
O4': (-85.691,30.542,2.357)
C8: (-83.032,30.744,3.054)
O2': (-86.084,29.627,-0.467)
C6: (-79.968,31.587,1.585)
C5: (-81.263,31.262,2.009)
C4: (-82.283,31.237,1.075)
P: (-86.702,28.709,6.343)
C4': (-86.061,29.141,2.497)
C2': (-84.962,29.477,0.381)
C2: (-80.866,31.814,-0.507)
N1: (-79.794,31.872,0.298)
N3: (-82.140,31.507,-0.231)
N6: (-78.900,31.630,2.358)
N7: (-81.756,30.943,3.251)
N9: (-83.439,30.895,1.753)
O5': (-86.913,28.717,4.755)
O3': (-85.818,27.240,0.958)
OP2: (-87.720,29.552,6.998)
C3': (-85.222,28.423,1.442)
C1': (-84.829,30.718,1.247)
C5': (-85.777,28.692,3.909)
O4': (-85.691,30.542,2.357)
C8: (-83.032,30.744,3.054)
O2': (-86.084,29.627,-0.467)
C6: (-79.968,31.587,1.585)
C5: (-81.263,31.262,2.009)
C4: (-82.283,31.237,1.075)
P: (-86.702,28.709,6.343)
C4': (-86.061,29.141,2.497)
C2': (-84.962,29.477,0.381)
C2: (-80.866,31.814,-0.507)
N1: (-79.794,31.872,0.298)
N3: (-82.140,31.507,-0.231)
N6: (-78.900,31.630,2.358)
N7: (-81.756,30.943,3.251)
N9: (-83.439,30.895,1.753)
O5': (-86.913,28.717,4.755)
O3': (-85.818,27.240,0.958)
Image (generated by PyMOL):