Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A2480:A1856
Extra
PDB:
ATOM 1 O3' A A2479 -91.595 -37.268 3.194 1.00113.80 O
ATOM 2 P G A2480 -91.848 -35.685 3.082 1.00125.23 P
ATOM 3 OP1 G A2480 -93.218 -35.393 3.582 1.00 67.37 O
ATOM 4 OP2 G A2480 -91.460 -35.264 1.711 1.00 67.37 O
ATOM 5 O5' G A2480 -90.812 -35.041 4.108 1.00 44.76 O
ATOM 6 C5' G A2480 -89.390 -35.225 3.946 1.00 44.76 C
ATOM 7 C4' G A2480 -88.765 -33.981 3.343 1.00 44.76 C
ATOM 8 O4' G A2480 -88.627 -32.912 4.329 1.00 44.76 O
ATOM 9 C3' G A2480 -87.355 -34.176 2.826 1.00 44.76 C
ATOM 10 O3' G A2480 -87.376 -34.800 1.552 1.00 44.76 O
ATOM 11 C2' G A2480 -86.809 -32.752 2.799 1.00 44.76 C
ATOM 12 O2' G A2480 -87.180 -32.039 1.642 1.00 44.76 O
ATOM 13 C1' G A2480 -87.470 -32.136 4.037 1.00 44.76 C
ATOM 14 N9 G A2480 -86.542 -32.198 5.168 1.00 3.96 N
ATOM 15 C8 G A2480 -86.469 -33.164 6.145 1.00 3.96 C
ATOM 16 N7 G A2480 -85.434 -33.025 6.936 1.00 3.96 N
ATOM 17 C5 G A2480 -84.810 -31.883 6.475 1.00 3.96 C
ATOM 18 C6 G A2480 -83.640 -31.271 6.912 1.00 3.96 C
ATOM 19 O6 G A2480 -82.878 -31.641 7.796 1.00 3.96 O
ATOM 20 N1 G A2480 -83.361 -30.122 6.189 1.00 3.96 N
ATOM 21 C2 G A2480 -84.119 -29.644 5.152 1.00 3.96 C
ATOM 22 N2 G A2480 -83.699 -28.521 4.578 1.00 3.96 N
ATOM 23 N3 G A2480 -85.215 -30.229 4.710 1.00 3.96 N
ATOM 24 C4 G A2480 -85.501 -31.337 5.412 1.00 3.96 C
ATOM 25 P U A2481 -86.003 -35.283 0.886 1.00 42.71 P
ATOM 26 OP1 U A2481 -86.303 -36.065 -0.347 1.00 44.06 O
ATOM 27 OP2 U A2481 -85.119 -35.861 1.924 1.00 44.06 O
ATOM 28 O5' U A2481 -85.386 -33.901 0.439 1.00 7.22 O
TER
ATOM 1 O3' U B1855 -85.294 -24.878 2.273 1.00 1.31 O
ATOM 2 P U B1856 -86.227 -26.166 2.097 1.00 3.80 P
ATOM 3 OP1 U B1856 -87.354 -26.031 3.036 1.00 3.80 O
ATOM 4 OP2 U B1856 -85.323 -27.338 2.195 1.00 3.80 O
ATOM 5 O5' U B1856 -86.813 -26.084 0.616 1.00 10.44 O
ATOM 6 C5' U B1856 -87.736 -25.033 0.232 1.00 10.44 C
ATOM 7 C4' U B1856 -88.515 -25.418 -1.024 1.00 10.44 C
ATOM 8 O4' U B1856 -89.206 -24.230 -1.521 1.00 10.44 O
ATOM 9 C3' U B1856 -87.634 -25.907 -2.172 1.00 10.44 C
ATOM 10 O3' U B1856 -88.353 -26.867 -2.963 1.00 10.44 O
ATOM 11 C2' U B1856 -87.393 -24.632 -2.973 1.00 10.44 C
ATOM 12 O2' U B1856 -87.054 -24.852 -4.323 1.00 10.44 O
ATOM 13 C1' U B1856 -88.732 -23.907 -2.811 1.00 10.44 C
ATOM 14 N1 U B1856 -88.628 -22.445 -2.920 1.00 12.91 N
ATOM 15 C2 U B1856 -89.530 -21.778 -3.738 1.00 12.91 C
ATOM 16 O2 U B1856 -90.458 -22.324 -4.297 1.00 12.91 O
ATOM 17 N3 U B1856 -89.309 -20.433 -3.869 1.00 12.91 N
ATOM 18 C4 U B1856 -88.314 -19.695 -3.269 1.00 12.91 C
ATOM 19 O4 U B1856 -88.144 -18.523 -3.610 1.00 12.91 O
ATOM 20 C5 U B1856 -87.464 -20.443 -2.398 1.00 12.91 C
ATOM 21 C6 U B1856 -87.646 -21.757 -2.258 1.00 12.91 C
ATOM 22 P C B1857 -88.432 -28.409 -2.497 1.00 25.23 P
ATOM 23 OP1 C B1857 -87.384 -28.624 -1.472 1.00 52.39 O
ATOM 24 OP2 C B1857 -88.460 -29.276 -3.714 1.00 52.39 O
ATOM 25 O5' C B1857 -89.849 -28.494 -1.777 1.00 6.53 O
TER
ATOM 2 P G A2480 -91.848 -35.685 3.082 1.00125.23 P
ATOM 3 OP1 G A2480 -93.218 -35.393 3.582 1.00 67.37 O
ATOM 4 OP2 G A2480 -91.460 -35.264 1.711 1.00 67.37 O
ATOM 5 O5' G A2480 -90.812 -35.041 4.108 1.00 44.76 O
ATOM 6 C5' G A2480 -89.390 -35.225 3.946 1.00 44.76 C
ATOM 7 C4' G A2480 -88.765 -33.981 3.343 1.00 44.76 C
ATOM 8 O4' G A2480 -88.627 -32.912 4.329 1.00 44.76 O
ATOM 9 C3' G A2480 -87.355 -34.176 2.826 1.00 44.76 C
ATOM 10 O3' G A2480 -87.376 -34.800 1.552 1.00 44.76 O
ATOM 11 C2' G A2480 -86.809 -32.752 2.799 1.00 44.76 C
ATOM 12 O2' G A2480 -87.180 -32.039 1.642 1.00 44.76 O
ATOM 13 C1' G A2480 -87.470 -32.136 4.037 1.00 44.76 C
ATOM 14 N9 G A2480 -86.542 -32.198 5.168 1.00 3.96 N
ATOM 15 C8 G A2480 -86.469 -33.164 6.145 1.00 3.96 C
ATOM 16 N7 G A2480 -85.434 -33.025 6.936 1.00 3.96 N
ATOM 17 C5 G A2480 -84.810 -31.883 6.475 1.00 3.96 C
ATOM 18 C6 G A2480 -83.640 -31.271 6.912 1.00 3.96 C
ATOM 19 O6 G A2480 -82.878 -31.641 7.796 1.00 3.96 O
ATOM 20 N1 G A2480 -83.361 -30.122 6.189 1.00 3.96 N
ATOM 21 C2 G A2480 -84.119 -29.644 5.152 1.00 3.96 C
ATOM 22 N2 G A2480 -83.699 -28.521 4.578 1.00 3.96 N
ATOM 23 N3 G A2480 -85.215 -30.229 4.710 1.00 3.96 N
ATOM 24 C4 G A2480 -85.501 -31.337 5.412 1.00 3.96 C
ATOM 25 P U A2481 -86.003 -35.283 0.886 1.00 42.71 P
ATOM 26 OP1 U A2481 -86.303 -36.065 -0.347 1.00 44.06 O
ATOM 27 OP2 U A2481 -85.119 -35.861 1.924 1.00 44.06 O
ATOM 28 O5' U A2481 -85.386 -33.901 0.439 1.00 7.22 O
TER
ATOM 1 O3' U B1855 -85.294 -24.878 2.273 1.00 1.31 O
ATOM 2 P U B1856 -86.227 -26.166 2.097 1.00 3.80 P
ATOM 3 OP1 U B1856 -87.354 -26.031 3.036 1.00 3.80 O
ATOM 4 OP2 U B1856 -85.323 -27.338 2.195 1.00 3.80 O
ATOM 5 O5' U B1856 -86.813 -26.084 0.616 1.00 10.44 O
ATOM 6 C5' U B1856 -87.736 -25.033 0.232 1.00 10.44 C
ATOM 7 C4' U B1856 -88.515 -25.418 -1.024 1.00 10.44 C
ATOM 8 O4' U B1856 -89.206 -24.230 -1.521 1.00 10.44 O
ATOM 9 C3' U B1856 -87.634 -25.907 -2.172 1.00 10.44 C
ATOM 10 O3' U B1856 -88.353 -26.867 -2.963 1.00 10.44 O
ATOM 11 C2' U B1856 -87.393 -24.632 -2.973 1.00 10.44 C
ATOM 12 O2' U B1856 -87.054 -24.852 -4.323 1.00 10.44 O
ATOM 13 C1' U B1856 -88.732 -23.907 -2.811 1.00 10.44 C
ATOM 14 N1 U B1856 -88.628 -22.445 -2.920 1.00 12.91 N
ATOM 15 C2 U B1856 -89.530 -21.778 -3.738 1.00 12.91 C
ATOM 16 O2 U B1856 -90.458 -22.324 -4.297 1.00 12.91 O
ATOM 17 N3 U B1856 -89.309 -20.433 -3.869 1.00 12.91 N
ATOM 18 C4 U B1856 -88.314 -19.695 -3.269 1.00 12.91 C
ATOM 19 O4 U B1856 -88.144 -18.523 -3.610 1.00 12.91 O
ATOM 20 C5 U B1856 -87.464 -20.443 -2.398 1.00 12.91 C
ATOM 21 C6 U B1856 -87.646 -21.757 -2.258 1.00 12.91 C
ATOM 22 P C B1857 -88.432 -28.409 -2.497 1.00 25.23 P
ATOM 23 OP1 C B1857 -87.384 -28.624 -1.472 1.00 52.39 O
ATOM 24 OP2 C B1857 -88.460 -29.276 -3.714 1.00 52.39 O
ATOM 25 O5' C B1857 -89.849 -28.494 -1.777 1.00 6.53 O
TER
Atoms:
OP1: (-93.218,-35.393,3.582)
OP2: (-91.460,-35.264,1.711)
C3': (-87.355,-34.176,2.826)
C1': (-87.470,-32.136,4.037)
C5': (-89.390,-35.225,3.946)
O6: (-82.878,-31.641,7.796)
O4': (-88.627,-32.912,4.329)
C8: (-86.469,-33.164,6.145)
C2: (-84.119,-29.644,5.152)
C6: (-83.640,-31.271,6.912)
C5: (-84.810,-31.883,6.475)
C4: (-85.501,-31.337,5.412)
P: (-91.848,-35.685,3.082)
C4': (-88.765,-33.981,3.343)
C2': (-86.809,-32.752,2.799)
O2': (-87.180,-32.039,1.642)
N1: (-83.361,-30.122,6.189)
N2: (-83.699,-28.521,4.578)
N3: (-85.215,-30.229,4.710)
N7: (-85.434,-33.025,6.936)
N9: (-86.542,-32.198,5.168)
O5': (-90.812,-35.041,4.108)
O3': (-87.376,-34.800,1.552)
OP2: (-91.460,-35.264,1.711)
C3': (-87.355,-34.176,2.826)
C1': (-87.470,-32.136,4.037)
C5': (-89.390,-35.225,3.946)
O6: (-82.878,-31.641,7.796)
O4': (-88.627,-32.912,4.329)
C8: (-86.469,-33.164,6.145)
C2: (-84.119,-29.644,5.152)
C6: (-83.640,-31.271,6.912)
C5: (-84.810,-31.883,6.475)
C4: (-85.501,-31.337,5.412)
P: (-91.848,-35.685,3.082)
C4': (-88.765,-33.981,3.343)
C2': (-86.809,-32.752,2.799)
O2': (-87.180,-32.039,1.642)
N1: (-83.361,-30.122,6.189)
N2: (-83.699,-28.521,4.578)
N3: (-85.215,-30.229,4.710)
N7: (-85.434,-33.025,6.936)
N9: (-86.542,-32.198,5.168)
O5': (-90.812,-35.041,4.108)
O3': (-87.376,-34.800,1.552)
C4: (-88.314,-19.695,-3.269)
N3: (-89.309,-20.433,-3.869)
OP1: (-87.354,-26.031,3.036)
OP2: (-85.323,-27.338,2.195)
C2: (-89.530,-21.778,-3.738)
C1': (-88.732,-23.907,-2.811)
C3': (-87.634,-25.907,-2.172)
O5': (-86.813,-26.084,0.616)
O4': (-89.206,-24.230,-1.521)
C5': (-87.736,-25.033,0.232)
P: (-86.227,-26.166,2.097)
C4': (-88.515,-25.418,-1.024)
C2': (-87.393,-24.632,-2.973)
O2': (-87.054,-24.852,-4.323)
N1: (-88.628,-22.445,-2.920)
O4: (-88.144,-18.523,-3.610)
O2: (-90.458,-22.324,-4.297)
C6: (-87.646,-21.757,-2.258)
C5: (-87.464,-20.443,-2.398)
O3': (-88.353,-26.867,-2.963)
N3: (-89.309,-20.433,-3.869)
OP1: (-87.354,-26.031,3.036)
OP2: (-85.323,-27.338,2.195)
C2: (-89.530,-21.778,-3.738)
C1': (-88.732,-23.907,-2.811)
C3': (-87.634,-25.907,-2.172)
O5': (-86.813,-26.084,0.616)
O4': (-89.206,-24.230,-1.521)
C5': (-87.736,-25.033,0.232)
P: (-86.227,-26.166,2.097)
C4': (-88.515,-25.418,-1.024)
C2': (-87.393,-24.632,-2.973)
O2': (-87.054,-24.852,-4.323)
N1: (-88.628,-22.445,-2.920)
O4: (-88.144,-18.523,-3.610)
O2: (-90.458,-22.324,-4.297)
C6: (-87.646,-21.757,-2.258)
C5: (-87.464,-20.443,-2.398)
O3': (-88.353,-26.867,-2.963)
Image (generated by PyMOL):