ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A384:A357

Extra

PDB:
ATOM 1 O3' A A 383 136.376 71.535 29.518 1.00 47.19 O
ATOM 2 P G A 384 137.769 72.248 29.158 1.00 47.80 P
ATOM 3 OP1 G A 384 138.415 72.660 30.443 1.00 47.38 O
ATOM 4 OP2 G A 384 137.496 73.261 28.110 1.00 47.25 O
ATOM 5 O5' G A 384 138.631 71.082 28.540 1.00 46.54 O
ATOM 6 C5' G A 384 138.944 69.928 29.319 1.00 46.42 C
ATOM 7 C4' G A 384 139.932 69.060 28.596 1.00 46.27 C
ATOM 8 O4' G A 384 139.309 68.434 27.448 1.00 47.61 O
ATOM 9 C3' G A 384 141.132 69.779 28.018 1.00 46.39 C
ATOM 10 O3' G A 384 142.101 70.017 28.993 1.00 47.85 O
ATOM 11 C2' G A 384 141.608 68.818 26.935 1.00 46.50 C
ATOM 12 O2' G A 384 142.424 67.777 27.419 1.00 45.14 O
ATOM 13 C1' G A 384 140.287 68.228 26.438 1.00 46.81 C
ATOM 14 N9 G A 384 139.846 68.860 25.198 1.00 46.20 N
ATOM 15 C8 G A 384 138.856 69.794 25.033 1.00 45.52 C
ATOM 16 N7 G A 384 138.727 70.186 23.795 1.00 46.20 N
ATOM 17 C5 G A 384 139.685 69.460 23.104 1.00 46.86 C
ATOM 18 C6 G A 384 140.025 69.459 21.724 1.00 48.17 C
ATOM 19 O6 G A 384 139.529 70.122 20.799 1.00 51.23 O
ATOM 20 N1 G A 384 141.057 68.572 21.457 1.00 48.66 N
ATOM 21 C2 G A 384 141.688 67.789 22.390 1.00 48.75 C
ATOM 22 N2 G A 384 142.674 66.999 21.935 1.00 48.66 N
ATOM 23 N3 G A 384 141.379 67.780 23.673 1.00 48.01 N
ATOM 24 C4 G A 384 140.377 68.634 23.956 1.00 46.49 C
ATOM 25 P C A 385 143.085 71.275 28.836 1.00 48.96 P
ATOM 26 OP1 C A 385 143.982 71.286 30.041 1.00 49.67 O
ATOM 27 OP2 C A 385 142.272 72.472 28.516 1.00 47.70 O
ATOM 28 O5' C A 385 143.964 70.875 27.585 1.00 47.78 O
TER

ATOM 1 O3' C B 356 146.710 65.366 20.543 1.00 47.78 O
ATOM 2 P U B 357 146.428 65.944 22.020 1.00 49.08 P
ATOM 3 OP1 U B 357 146.117 67.406 21.904 1.00 50.56 O
ATOM 4 OP2 U B 357 147.572 65.508 22.839 1.00 51.08 O
ATOM 5 O5' U B 357 145.135 65.175 22.523 1.00 46.54 O
ATOM 6 C5' U B 357 144.941 63.795 22.216 1.00 44.63 C
ATOM 7 C4' U B 357 143.819 63.237 23.045 1.00 44.78 C
ATOM 8 O4' U B 357 142.694 64.155 23.039 1.00 44.38 O
ATOM 9 C3' U B 357 143.288 61.886 22.582 1.00 45.29 C
ATOM 10 O3' U B 357 142.933 61.127 23.730 1.00 46.65 O
ATOM 11 C2' U B 357 142.031 62.271 21.807 1.00 44.81 C
ATOM 12 O2' U B 357 141.035 61.277 21.755 1.00 44.58 O
ATOM 13 C1' U B 357 141.537 63.473 22.610 1.00 45.12 C
ATOM 14 N1 U B 357 140.689 64.405 21.852 1.00 45.68 N
ATOM 15 C2 U B 357 139.597 64.951 22.503 1.00 45.92 C
ATOM 16 O2 U B 357 139.321 64.699 23.662 1.00 46.48 O
ATOM 17 N3 U B 357 138.838 65.804 21.744 1.00 46.51 N
ATOM 18 C4 U B 357 139.059 66.163 20.430 1.00 47.53 C
ATOM 19 O4 U B 357 138.307 66.974 19.887 1.00 49.08 O
ATOM 20 C5 U B 357 140.207 65.557 19.829 1.00 47.39 C
ATOM 21 C6 U B 357 140.963 64.723 20.541 1.00 46.23 C
ATOM 22 P U B 358 143.905 59.954 24.254 1.00 47.58 P
ATOM 23 OP1 U B 358 143.495 59.757 25.677 1.00 47.28 O
ATOM 24 OP2 U B 358 145.323 60.250 23.902 1.00 46.62 O
ATOM 25 O5' U B 358 143.452 58.684 23.442 1.00 47.64 O
TER

Atoms:
OP1: (138.415,72.660,30.443)
OP2: (137.496,73.261,28.110)
C3': (141.132,69.779,28.018)
C1': (140.287,68.228,26.438)
C5': (138.944,69.928,29.319)
O6: (139.529,70.122,20.799)
O4': (139.309,68.434,27.448)
C8: (138.856,69.794,25.033)
C2: (141.688,67.789,22.390)
C6: (140.025,69.459,21.724)
C5: (139.685,69.460,23.104)
C4: (140.377,68.634,23.956)
P: (137.769,72.248,29.158)
C4': (139.932,69.060,28.596)
C2': (141.608,68.818,26.935)
O2': (142.424,67.777,27.419)
N1: (141.057,68.572,21.457)
N2: (142.674,66.999,21.935)
N3: (141.379,67.780,23.673)
N7: (138.727,70.186,23.795)
N9: (139.846,68.860,25.198)
O5': (138.631,71.082,28.540)
O3': (142.101,70.017,28.993)
C4: (139.059,66.163,20.430)
N3: (138.838,65.804,21.744)
OP1: (146.117,67.406,21.904)
OP2: (147.572,65.508,22.839)
C2: (139.597,64.951,22.503)
C1': (141.537,63.473,22.610)
C3': (143.288,61.886,22.582)
O5': (145.135,65.175,22.523)
O4': (142.694,64.155,23.039)
C5': (144.941,63.795,22.216)
P: (146.428,65.944,22.020)
C4': (143.819,63.237,23.045)
C2': (142.031,62.271,21.807)
O2': (141.035,61.277,21.755)
N1: (140.689,64.405,21.852)
O4: (138.307,66.974,19.887)
O2: (139.321,64.699,23.662)
C6: (140.963,64.723,20.541)
C5: (140.207,65.557,19.829)
O3': (142.933,61.127,23.730)
Image (generated by PyMOL):
PyMOL image
show in jmol