Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XDB:G8:G25
Extra
PDB:
ATOM 1 O3' U A 7 -9.491 14.223 23.258 1.00 53.36 O
ATOM 2 P G A 8 -11.041 14.629 23.346 1.00 63.35 P
ATOM 3 OP1 G A 8 -11.013 16.072 23.670 1.00 64.97 O
ATOM 4 OP2 G A 8 -11.833 13.671 24.158 1.00 66.16 O
ATOM 5 O5' G A 8 -11.418 14.470 21.834 1.00 42.26 O
ATOM 6 C5' G A 8 -10.574 15.117 20.899 1.00 36.54 C
ATOM 7 C4' G A 8 -11.252 15.111 19.565 1.00 40.69 C
ATOM 8 O4' G A 8 -11.383 13.731 19.124 1.00 44.93 O
ATOM 9 C3' G A 8 -12.660 15.711 19.553 1.00 37.24 C
ATOM 10 O3' G A 8 -12.839 16.448 18.344 1.00 41.90 O
ATOM 11 C2' G A 8 -13.549 14.469 19.553 1.00 41.43 C
ATOM 12 O2' G A 8 -14.839 14.632 18.999 1.00 46.06 O
ATOM 13 C1' G A 8 -12.708 13.530 18.703 1.00 45.25 C
ATOM 14 N9 G A 8 -13.092 12.116 18.735 1.00 52.34 N
ATOM 15 C8 G A 8 -13.990 11.482 19.555 1.00 51.76 C
ATOM 16 N7 G A 8 -14.135 10.218 19.277 1.00 50.52 N
ATOM 17 C5 G A 8 -13.297 10.008 18.192 1.00 55.40 C
ATOM 18 C6 G A 8 -13.017 8.839 17.436 1.00 56.61 C
ATOM 19 O6 G A 8 -13.477 7.703 17.571 1.00 56.86 O
ATOM 20 N1 G A 8 -12.097 9.076 16.424 1.00 54.14 N
ATOM 21 C2 G A 8 -11.524 10.292 16.168 1.00 52.84 C
ATOM 22 N2 G A 8 -10.670 10.349 15.143 1.00 51.39 N
ATOM 23 N3 G A 8 -11.768 11.384 16.863 1.00 56.37 N
ATOM 24 C4 G A 8 -12.658 11.171 17.848 1.00 55.50 C
ATOM 25 P A A 9 -13.000 18.054 18.342 1.00 52.49 P
ATOM 26 OP1 A A 9 -12.150 18.679 19.387 1.00 47.56 O
ATOM 27 OP2 A A 9 -12.849 18.511 16.943 1.00 50.38 O
ATOM 28 O5' A A 9 -14.524 18.065 18.769 1.00 54.97 O
TER
ATOM 1 O3' G B 24 -7.468 12.067 15.659 1.00 41.57 O
ATOM 2 P U B 25 -8.037 12.941 14.436 1.00 54.33 P
ATOM 3 OP1 U B 25 -7.642 14.341 14.712 1.00 51.16 O
ATOM 4 OP2 U B 25 -9.463 12.614 14.214 1.00 52.93 O
ATOM 5 O5' U B 25 -7.240 12.352 13.205 1.00 52.27 O
ATOM 6 C5' U B 25 -5.871 12.649 13.003 1.00 41.68 C
ATOM 7 C4' U B 25 -5.122 11.455 12.458 1.00 43.89 C
ATOM 8 O4' U B 25 -4.772 10.549 13.538 1.00 41.15 O
ATOM 9 C3' U B 25 -5.831 10.561 11.439 1.00 40.61 C
ATOM 10 O3' U B 25 -5.820 11.087 10.131 1.00 36.98 O
ATOM 11 C2' U B 25 -4.994 9.299 11.526 1.00 49.28 C
ATOM 12 O2' U B 25 -3.746 9.517 10.888 1.00 51.45 O
ATOM 13 C1' U B 25 -4.728 9.236 13.026 1.00 49.42 C
ATOM 14 N1 U B 25 -5.705 8.426 13.762 1.00 56.71 N
ATOM 15 C2 U B 25 -5.616 7.058 13.612 1.00 61.08 C
ATOM 16 O2 U B 25 -4.797 6.525 12.889 1.00 64.42 O
ATOM 17 N3 U B 25 -6.529 6.346 14.336 1.00 55.47 N
ATOM 18 C4 U B 25 -7.490 6.860 15.172 1.00 51.91 C
ATOM 19 O4 U B 25 -8.230 6.084 15.762 1.00 55.87 O
ATOM 20 C5 U B 25 -7.522 8.283 15.272 1.00 50.86 C
ATOM 21 C6 U B 25 -6.639 9.006 14.580 1.00 52.29 C
ATOM 22 P G B 26 -6.881 10.724 8.987 1.00 53.38 P
ATOM 23 OP1 G B 26 -6.420 11.585 7.870 1.00 45.69 O
ATOM 24 OP2 G B 26 -8.286 10.870 9.441 1.00 56.92 O
ATOM 25 O5' G B 26 -6.579 9.186 8.735 1.00 53.12 O
TER
ATOM 2 P G A 8 -11.041 14.629 23.346 1.00 63.35 P
ATOM 3 OP1 G A 8 -11.013 16.072 23.670 1.00 64.97 O
ATOM 4 OP2 G A 8 -11.833 13.671 24.158 1.00 66.16 O
ATOM 5 O5' G A 8 -11.418 14.470 21.834 1.00 42.26 O
ATOM 6 C5' G A 8 -10.574 15.117 20.899 1.00 36.54 C
ATOM 7 C4' G A 8 -11.252 15.111 19.565 1.00 40.69 C
ATOM 8 O4' G A 8 -11.383 13.731 19.124 1.00 44.93 O
ATOM 9 C3' G A 8 -12.660 15.711 19.553 1.00 37.24 C
ATOM 10 O3' G A 8 -12.839 16.448 18.344 1.00 41.90 O
ATOM 11 C2' G A 8 -13.549 14.469 19.553 1.00 41.43 C
ATOM 12 O2' G A 8 -14.839 14.632 18.999 1.00 46.06 O
ATOM 13 C1' G A 8 -12.708 13.530 18.703 1.00 45.25 C
ATOM 14 N9 G A 8 -13.092 12.116 18.735 1.00 52.34 N
ATOM 15 C8 G A 8 -13.990 11.482 19.555 1.00 51.76 C
ATOM 16 N7 G A 8 -14.135 10.218 19.277 1.00 50.52 N
ATOM 17 C5 G A 8 -13.297 10.008 18.192 1.00 55.40 C
ATOM 18 C6 G A 8 -13.017 8.839 17.436 1.00 56.61 C
ATOM 19 O6 G A 8 -13.477 7.703 17.571 1.00 56.86 O
ATOM 20 N1 G A 8 -12.097 9.076 16.424 1.00 54.14 N
ATOM 21 C2 G A 8 -11.524 10.292 16.168 1.00 52.84 C
ATOM 22 N2 G A 8 -10.670 10.349 15.143 1.00 51.39 N
ATOM 23 N3 G A 8 -11.768 11.384 16.863 1.00 56.37 N
ATOM 24 C4 G A 8 -12.658 11.171 17.848 1.00 55.50 C
ATOM 25 P A A 9 -13.000 18.054 18.342 1.00 52.49 P
ATOM 26 OP1 A A 9 -12.150 18.679 19.387 1.00 47.56 O
ATOM 27 OP2 A A 9 -12.849 18.511 16.943 1.00 50.38 O
ATOM 28 O5' A A 9 -14.524 18.065 18.769 1.00 54.97 O
TER
ATOM 1 O3' G B 24 -7.468 12.067 15.659 1.00 41.57 O
ATOM 2 P U B 25 -8.037 12.941 14.436 1.00 54.33 P
ATOM 3 OP1 U B 25 -7.642 14.341 14.712 1.00 51.16 O
ATOM 4 OP2 U B 25 -9.463 12.614 14.214 1.00 52.93 O
ATOM 5 O5' U B 25 -7.240 12.352 13.205 1.00 52.27 O
ATOM 6 C5' U B 25 -5.871 12.649 13.003 1.00 41.68 C
ATOM 7 C4' U B 25 -5.122 11.455 12.458 1.00 43.89 C
ATOM 8 O4' U B 25 -4.772 10.549 13.538 1.00 41.15 O
ATOM 9 C3' U B 25 -5.831 10.561 11.439 1.00 40.61 C
ATOM 10 O3' U B 25 -5.820 11.087 10.131 1.00 36.98 O
ATOM 11 C2' U B 25 -4.994 9.299 11.526 1.00 49.28 C
ATOM 12 O2' U B 25 -3.746 9.517 10.888 1.00 51.45 O
ATOM 13 C1' U B 25 -4.728 9.236 13.026 1.00 49.42 C
ATOM 14 N1 U B 25 -5.705 8.426 13.762 1.00 56.71 N
ATOM 15 C2 U B 25 -5.616 7.058 13.612 1.00 61.08 C
ATOM 16 O2 U B 25 -4.797 6.525 12.889 1.00 64.42 O
ATOM 17 N3 U B 25 -6.529 6.346 14.336 1.00 55.47 N
ATOM 18 C4 U B 25 -7.490 6.860 15.172 1.00 51.91 C
ATOM 19 O4 U B 25 -8.230 6.084 15.762 1.00 55.87 O
ATOM 20 C5 U B 25 -7.522 8.283 15.272 1.00 50.86 C
ATOM 21 C6 U B 25 -6.639 9.006 14.580 1.00 52.29 C
ATOM 22 P G B 26 -6.881 10.724 8.987 1.00 53.38 P
ATOM 23 OP1 G B 26 -6.420 11.585 7.870 1.00 45.69 O
ATOM 24 OP2 G B 26 -8.286 10.870 9.441 1.00 56.92 O
ATOM 25 O5' G B 26 -6.579 9.186 8.735 1.00 53.12 O
TER
Atoms:
OP1: (-11.013,16.072,23.670)
OP2: (-11.833,13.671,24.158)
C3': (-12.660,15.711,19.553)
C1': (-12.708,13.530,18.703)
C5': (-10.574,15.117,20.899)
O6: (-13.477,7.703,17.571)
O4': (-11.383,13.731,19.124)
C8: (-13.990,11.482,19.555)
C2: (-11.524,10.292,16.168)
C6: (-13.017,8.839,17.436)
C5: (-13.297,10.008,18.192)
C4: (-12.658,11.171,17.848)
P: (-11.041,14.629,23.346)
C4': (-11.252,15.111,19.565)
C2': (-13.549,14.469,19.553)
O2': (-14.839,14.632,18.999)
N1: (-12.097,9.076,16.424)
N2: (-10.670,10.349,15.143)
N3: (-11.768,11.384,16.863)
N7: (-14.135,10.218,19.277)
N9: (-13.092,12.116,18.735)
O5': (-11.418,14.470,21.834)
O3': (-12.839,16.448,18.344)
OP2: (-11.833,13.671,24.158)
C3': (-12.660,15.711,19.553)
C1': (-12.708,13.530,18.703)
C5': (-10.574,15.117,20.899)
O6: (-13.477,7.703,17.571)
O4': (-11.383,13.731,19.124)
C8: (-13.990,11.482,19.555)
C2: (-11.524,10.292,16.168)
C6: (-13.017,8.839,17.436)
C5: (-13.297,10.008,18.192)
C4: (-12.658,11.171,17.848)
P: (-11.041,14.629,23.346)
C4': (-11.252,15.111,19.565)
C2': (-13.549,14.469,19.553)
O2': (-14.839,14.632,18.999)
N1: (-12.097,9.076,16.424)
N2: (-10.670,10.349,15.143)
N3: (-11.768,11.384,16.863)
N7: (-14.135,10.218,19.277)
N9: (-13.092,12.116,18.735)
O5': (-11.418,14.470,21.834)
O3': (-12.839,16.448,18.344)
C4: (-7.490,6.860,15.172)
N3: (-6.529,6.346,14.336)
OP1: (-7.642,14.341,14.712)
OP2: (-9.463,12.614,14.214)
C2: (-5.616,7.058,13.612)
C1': (-4.728,9.236,13.026)
C3': (-5.831,10.561,11.439)
O5': (-7.240,12.352,13.205)
O4': (-4.772,10.549,13.538)
C5': (-5.871,12.649,13.003)
P: (-8.037,12.941,14.436)
C4': (-5.122,11.455,12.458)
C2': (-4.994,9.299,11.526)
O2': (-3.746,9.517,10.888)
N1: (-5.705,8.426,13.762)
O4: (-8.230,6.084,15.762)
O2: (-4.797,6.525,12.889)
C6: (-6.639,9.006,14.580)
C5: (-7.522,8.283,15.272)
O3': (-5.820,11.087,10.131)
N3: (-6.529,6.346,14.336)
OP1: (-7.642,14.341,14.712)
OP2: (-9.463,12.614,14.214)
C2: (-5.616,7.058,13.612)
C1': (-4.728,9.236,13.026)
C3': (-5.831,10.561,11.439)
O5': (-7.240,12.352,13.205)
O4': (-4.772,10.549,13.538)
C5': (-5.871,12.649,13.003)
P: (-8.037,12.941,14.436)
C4': (-5.122,11.455,12.458)
C2': (-4.994,9.299,11.526)
O2': (-3.746,9.517,10.888)
N1: (-5.705,8.426,13.762)
O4: (-8.230,6.084,15.762)
O2: (-4.797,6.525,12.889)
C6: (-6.639,9.006,14.580)
C5: (-7.522,8.283,15.272)
O3': (-5.820,11.087,10.131)
Image (generated by PyMOL):