Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:13011:12967
Extra
PDB:
ATOM 1 O3' U A3010 96.352 41.241 -0.379 1.00 65.23 O
ATOM 2 P U A3011 97.766 40.999 -1.094 1.00 61.27 P
ATOM 3 OP1 U A3011 98.437 39.917 -0.338 1.00 60.84 O
ATOM 4 OP2 U A3011 98.439 42.311 -1.232 1.00 61.81 O
ATOM 5 O5' U A3011 97.317 40.488 -2.525 1.00 61.58 O
ATOM 6 C5' U A3011 97.408 39.122 -2.867 1.00 61.37 C
ATOM 7 C4' U A3011 96.068 38.441 -2.971 1.00 60.99 C
ATOM 8 O4' U A3011 96.280 37.074 -2.634 1.00 60.57 O
ATOM 9 C3' U A3011 94.978 38.934 -2.022 1.00 60.58 C
ATOM 10 O3' U A3011 93.672 38.591 -2.534 1.00 60.46 O
ATOM 11 C2' U A3011 95.229 38.111 -0.781 1.00 59.95 C
ATOM 12 O2' U A3011 94.058 37.849 -0.040 1.00 59.42 O
ATOM 13 C1' U A3011 95.808 36.815 -1.339 1.00 59.94 C
ATOM 14 N1 U A3011 96.932 36.312 -0.565 1.00 59.74 N
ATOM 15 C2 U A3011 96.607 35.420 0.402 1.00 59.12 C
ATOM 16 O2 U A3011 95.440 35.154 0.523 1.00 58.80 O
ATOM 17 N3 U A3011 97.629 34.910 1.170 1.00 58.91 N
ATOM 18 C4 U A3011 98.954 35.235 0.984 1.00 59.31 C
ATOM 19 O4 U A3011 99.822 34.728 1.697 1.00 59.11 O
ATOM 20 C5 U A3011 99.221 36.178 -0.054 1.00 59.95 C
ATOM 21 C6 U A3011 98.224 36.684 -0.779 1.00 60.14 C
ATOM 22 P G A3012 92.846 39.597 -3.482 1.00 52.72 P
ATOM 23 OP1 G A3012 93.045 40.949 -2.961 1.00 52.91 O
ATOM 24 OP2 G A3012 91.497 39.080 -3.559 1.00 52.40 O
ATOM 25 O5' G A3012 93.557 39.453 -4.908 1.00 53.35 O
TER
ATOM 1 O3' U B2966 90.948 33.276 4.069 1.00 59.38 O
ATOM 2 P A B2967 92.334 33.797 3.396 1.00 52.00 P
ATOM 3 OP1 A B2967 93.265 34.092 4.532 1.00 51.84 O
ATOM 4 OP2 A B2967 92.001 34.886 2.439 1.00 52.53 O
ATOM 5 O5' A B2967 92.869 32.529 2.609 1.00 52.08 O
ATOM 6 C5' A B2967 92.917 31.256 3.247 1.00 51.59 C
ATOM 7 C4' A B2967 94.321 30.745 3.394 1.00 51.68 C
ATOM 8 O4' A B2967 94.873 30.468 2.087 1.00 52.17 O
ATOM 9 C3' A B2967 95.276 31.689 4.050 1.00 51.82 C
ATOM 10 O3' A B2967 96.281 30.915 4.648 1.00 51.64 O
ATOM 11 C2' A B2967 95.846 32.447 2.851 1.00 52.50 C
ATOM 12 O2' A B2967 97.099 33.080 3.048 1.00 52.80 O
ATOM 13 C1' A B2967 95.927 31.353 1.810 1.00 52.64 C
ATOM 14 N9 A B2967 95.729 31.858 0.483 1.00 53.18 N
ATOM 15 C8 A B2967 94.535 32.142 -0.131 1.00 53.25 C
ATOM 16 N7 A B2967 94.690 32.646 -1.341 1.00 53.83 N
ATOM 17 C5 A B2967 96.078 32.702 -1.471 1.00 54.13 C
ATOM 18 C6 A B2967 96.894 33.132 -2.504 1.00 54.76 C
ATOM 19 N6 A B2967 96.412 33.612 -3.656 1.00 55.21 N
ATOM 20 N1 A B2967 98.230 33.037 -2.292 1.00 54.91 N
ATOM 21 C2 A B2967 98.701 32.549 -1.143 1.00 54.46 C
ATOM 22 N3 A B2967 98.028 32.112 -0.091 1.00 53.86 N
ATOM 23 C4 A B2967 96.722 32.214 -0.348 1.00 53.73 C
ATOM 24 P G B2968 96.723 31.194 6.143 1.00 51.16 P
ATOM 25 OP1 G B2968 97.148 29.898 6.686 1.00 50.80 O
ATOM 26 OP2 G B2968 95.629 31.920 6.814 1.00 50.89 O
ATOM 27 O5' G B2968 97.968 32.166 5.964 1.00 51.66 O
TER
ATOM 2 P U A3011 97.766 40.999 -1.094 1.00 61.27 P
ATOM 3 OP1 U A3011 98.437 39.917 -0.338 1.00 60.84 O
ATOM 4 OP2 U A3011 98.439 42.311 -1.232 1.00 61.81 O
ATOM 5 O5' U A3011 97.317 40.488 -2.525 1.00 61.58 O
ATOM 6 C5' U A3011 97.408 39.122 -2.867 1.00 61.37 C
ATOM 7 C4' U A3011 96.068 38.441 -2.971 1.00 60.99 C
ATOM 8 O4' U A3011 96.280 37.074 -2.634 1.00 60.57 O
ATOM 9 C3' U A3011 94.978 38.934 -2.022 1.00 60.58 C
ATOM 10 O3' U A3011 93.672 38.591 -2.534 1.00 60.46 O
ATOM 11 C2' U A3011 95.229 38.111 -0.781 1.00 59.95 C
ATOM 12 O2' U A3011 94.058 37.849 -0.040 1.00 59.42 O
ATOM 13 C1' U A3011 95.808 36.815 -1.339 1.00 59.94 C
ATOM 14 N1 U A3011 96.932 36.312 -0.565 1.00 59.74 N
ATOM 15 C2 U A3011 96.607 35.420 0.402 1.00 59.12 C
ATOM 16 O2 U A3011 95.440 35.154 0.523 1.00 58.80 O
ATOM 17 N3 U A3011 97.629 34.910 1.170 1.00 58.91 N
ATOM 18 C4 U A3011 98.954 35.235 0.984 1.00 59.31 C
ATOM 19 O4 U A3011 99.822 34.728 1.697 1.00 59.11 O
ATOM 20 C5 U A3011 99.221 36.178 -0.054 1.00 59.95 C
ATOM 21 C6 U A3011 98.224 36.684 -0.779 1.00 60.14 C
ATOM 22 P G A3012 92.846 39.597 -3.482 1.00 52.72 P
ATOM 23 OP1 G A3012 93.045 40.949 -2.961 1.00 52.91 O
ATOM 24 OP2 G A3012 91.497 39.080 -3.559 1.00 52.40 O
ATOM 25 O5' G A3012 93.557 39.453 -4.908 1.00 53.35 O
TER
ATOM 1 O3' U B2966 90.948 33.276 4.069 1.00 59.38 O
ATOM 2 P A B2967 92.334 33.797 3.396 1.00 52.00 P
ATOM 3 OP1 A B2967 93.265 34.092 4.532 1.00 51.84 O
ATOM 4 OP2 A B2967 92.001 34.886 2.439 1.00 52.53 O
ATOM 5 O5' A B2967 92.869 32.529 2.609 1.00 52.08 O
ATOM 6 C5' A B2967 92.917 31.256 3.247 1.00 51.59 C
ATOM 7 C4' A B2967 94.321 30.745 3.394 1.00 51.68 C
ATOM 8 O4' A B2967 94.873 30.468 2.087 1.00 52.17 O
ATOM 9 C3' A B2967 95.276 31.689 4.050 1.00 51.82 C
ATOM 10 O3' A B2967 96.281 30.915 4.648 1.00 51.64 O
ATOM 11 C2' A B2967 95.846 32.447 2.851 1.00 52.50 C
ATOM 12 O2' A B2967 97.099 33.080 3.048 1.00 52.80 O
ATOM 13 C1' A B2967 95.927 31.353 1.810 1.00 52.64 C
ATOM 14 N9 A B2967 95.729 31.858 0.483 1.00 53.18 N
ATOM 15 C8 A B2967 94.535 32.142 -0.131 1.00 53.25 C
ATOM 16 N7 A B2967 94.690 32.646 -1.341 1.00 53.83 N
ATOM 17 C5 A B2967 96.078 32.702 -1.471 1.00 54.13 C
ATOM 18 C6 A B2967 96.894 33.132 -2.504 1.00 54.76 C
ATOM 19 N6 A B2967 96.412 33.612 -3.656 1.00 55.21 N
ATOM 20 N1 A B2967 98.230 33.037 -2.292 1.00 54.91 N
ATOM 21 C2 A B2967 98.701 32.549 -1.143 1.00 54.46 C
ATOM 22 N3 A B2967 98.028 32.112 -0.091 1.00 53.86 N
ATOM 23 C4 A B2967 96.722 32.214 -0.348 1.00 53.73 C
ATOM 24 P G B2968 96.723 31.194 6.143 1.00 51.16 P
ATOM 25 OP1 G B2968 97.148 29.898 6.686 1.00 50.80 O
ATOM 26 OP2 G B2968 95.629 31.920 6.814 1.00 50.89 O
ATOM 27 O5' G B2968 97.968 32.166 5.964 1.00 51.66 O
TER
Atoms:
C4: (98.954,35.235,0.984)
N3: (97.629,34.910,1.170)
OP1: (98.437,39.917,-0.338)
OP2: (98.439,42.311,-1.232)
C2: (96.607,35.420,0.402)
C1': (95.808,36.815,-1.339)
C3': (94.978,38.934,-2.022)
O5': (97.317,40.488,-2.525)
O4': (96.280,37.074,-2.634)
C5': (97.408,39.122,-2.867)
P: (97.766,40.999,-1.094)
C4': (96.068,38.441,-2.971)
C2': (95.229,38.111,-0.781)
O2': (94.058,37.849,-0.040)
N1: (96.932,36.312,-0.565)
O4: (99.822,34.728,1.697)
O2: (95.440,35.154,0.523)
C6: (98.224,36.684,-0.779)
C5: (99.221,36.178,-0.054)
O3': (93.672,38.591,-2.534)
N3: (97.629,34.910,1.170)
OP1: (98.437,39.917,-0.338)
OP2: (98.439,42.311,-1.232)
C2: (96.607,35.420,0.402)
C1': (95.808,36.815,-1.339)
C3': (94.978,38.934,-2.022)
O5': (97.317,40.488,-2.525)
O4': (96.280,37.074,-2.634)
C5': (97.408,39.122,-2.867)
P: (97.766,40.999,-1.094)
C4': (96.068,38.441,-2.971)
C2': (95.229,38.111,-0.781)
O2': (94.058,37.849,-0.040)
N1: (96.932,36.312,-0.565)
O4: (99.822,34.728,1.697)
O2: (95.440,35.154,0.523)
C6: (98.224,36.684,-0.779)
C5: (99.221,36.178,-0.054)
O3': (93.672,38.591,-2.534)
OP1: (93.265,34.092,4.532)
OP2: (92.001,34.886,2.439)
C3': (95.276,31.689,4.050)
C1': (95.927,31.353,1.810)
C5': (92.917,31.256,3.247)
O4': (94.873,30.468,2.087)
C8: (94.535,32.142,-0.131)
O2': (97.099,33.080,3.048)
C6: (96.894,33.132,-2.504)
C5: (96.078,32.702,-1.471)
C4: (96.722,32.214,-0.348)
P: (92.334,33.797,3.396)
C4': (94.321,30.745,3.394)
C2': (95.846,32.447,2.851)
C2: (98.701,32.549,-1.143)
N1: (98.230,33.037,-2.292)
N3: (98.028,32.112,-0.091)
N6: (96.412,33.612,-3.656)
N7: (94.690,32.646,-1.341)
N9: (95.729,31.858,0.483)
O5': (92.869,32.529,2.609)
O3': (96.281,30.915,4.648)
OP2: (92.001,34.886,2.439)
C3': (95.276,31.689,4.050)
C1': (95.927,31.353,1.810)
C5': (92.917,31.256,3.247)
O4': (94.873,30.468,2.087)
C8: (94.535,32.142,-0.131)
O2': (97.099,33.080,3.048)
C6: (96.894,33.132,-2.504)
C5: (96.078,32.702,-1.471)
C4: (96.722,32.214,-0.348)
P: (92.334,33.797,3.396)
C4': (94.321,30.745,3.394)
C2': (95.846,32.447,2.851)
C2: (98.701,32.549,-1.143)
N1: (98.230,33.037,-2.292)
N3: (98.028,32.112,-0.091)
N6: (96.412,33.612,-3.656)
N7: (94.690,32.646,-1.341)
N9: (95.729,31.858,0.483)
O5': (92.869,32.529,2.609)
O3': (96.281,30.915,4.648)
Image (generated by PyMOL):