ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A509:A510

Extra

PDB:
ATOM 1 O3' A A 508 28.300 134.759 79.426 1.00 35.65 O
ATOM 2 P A A 509 28.365 135.671 80.739 1.00 36.32 P
ATOM 3 OP1 A A 509 27.906 134.819 81.859 1.00 35.68 O
ATOM 4 OP2 A A 509 27.689 136.958 80.468 1.00 36.18 O
ATOM 5 O5' A A 509 29.911 135.949 80.956 1.00 37.29 O
ATOM 6 C5' A A 509 30.832 134.896 81.253 1.00 37.04 C
ATOM 7 C4' A A 509 32.236 135.433 81.187 1.00 37.14 C
ATOM 8 O4' A A 509 32.496 135.928 79.847 1.00 36.47 O
ATOM 9 C3' A A 509 32.494 136.668 82.034 1.00 36.79 C
ATOM 10 O3' A A 509 32.715 136.359 83.407 1.00 36.24 O
ATOM 11 C2' A A 509 33.758 137.215 81.394 1.00 36.23 C
ATOM 12 O2' A A 509 34.882 136.486 81.824 1.00 38.46 O
ATOM 13 C1' A A 509 33.503 136.925 79.911 1.00 36.33 C
ATOM 14 N9 A A 509 33.076 138.106 79.146 1.00 37.62 N
ATOM 15 C8 A A 509 31.882 138.777 79.226 1.00 37.41 C
ATOM 16 N7 A A 509 31.818 139.834 78.457 1.00 37.18 N
ATOM 17 C5 A A 509 33.050 139.860 77.815 1.00 37.30 C
ATOM 18 C6 A A 509 33.627 140.757 76.879 1.00 36.97 C
ATOM 19 N6 A A 509 33.024 141.860 76.432 1.00 37.80 N
ATOM 20 N1 A A 509 34.867 140.481 76.428 1.00 36.22 N
ATOM 21 C2 A A 509 35.489 139.401 76.903 1.00 35.83 C
ATOM 22 N3 A A 509 35.069 138.507 77.790 1.00 37.04 N
ATOM 23 C4 A A 509 33.827 138.793 78.214 1.00 37.42 C
ATOM 24 P U A 510 31.904 137.154 84.544 1.00 37.22 P
ATOM 25 OP1 U A 510 32.485 136.786 85.853 1.00 36.83 O
ATOM 26 OP2 U A 510 30.463 136.919 84.296 1.00 36.21 O
ATOM 27 O5' U A 510 32.183 138.695 84.245 1.00 34.86 O
TER

ATOM 1 O3' A B 509 32.715 136.359 83.407 1.00 36.24 O
ATOM 2 P U B 510 31.904 137.154 84.544 1.00 37.22 P
ATOM 3 OP1 U B 510 32.485 136.786 85.853 1.00 36.83 O
ATOM 4 OP2 U B 510 30.463 136.919 84.296 1.00 36.21 O
ATOM 5 O5' U B 510 32.183 138.695 84.245 1.00 34.86 O
ATOM 6 C5' U B 510 33.504 139.251 84.270 1.00 34.69 C
ATOM 7 C4' U B 510 33.489 140.628 83.656 1.00 37.74 C
ATOM 8 O4' U B 510 32.984 140.554 82.299 1.00 40.01 O
ATOM 9 C3' U B 510 32.532 141.591 84.317 1.00 39.01 C
ATOM 10 O3' U B 510 33.088 142.150 85.491 1.00 39.95 O
ATOM 11 C2' U B 510 32.278 142.620 83.224 1.00 39.62 C
ATOM 12 O2' U B 510 33.308 143.568 83.090 1.00 39.86 O
ATOM 13 C1' U B 510 32.274 141.740 81.977 1.00 40.18 C
ATOM 14 N1 U B 510 30.921 141.393 81.512 1.00 42.00 N
ATOM 15 C2 U B 510 30.283 142.280 80.652 1.00 43.62 C
ATOM 16 O2 U B 510 30.790 143.305 80.246 1.00 45.13 O
ATOM 17 N3 U B 510 29.016 141.917 80.282 1.00 45.49 N
ATOM 18 C4 U B 510 28.332 140.789 80.653 1.00 45.20 C
ATOM 19 O4 U B 510 27.190 140.624 80.232 1.00 46.94 O
ATOM 20 C5 U B 510 29.047 139.912 81.523 1.00 44.67 C
ATOM 21 C6 U B 510 30.286 140.235 81.917 1.00 43.07 C
ATOM 22 P C B 511 32.133 142.910 86.525 1.00 41.97 P
ATOM 23 OP1 C B 511 32.977 143.246 87.705 1.00 42.19 O
ATOM 24 OP2 C B 511 30.912 142.096 86.699 1.00 38.62 O
ATOM 25 O5' C B 511 31.780 144.265 85.767 1.00 42.24 O
TER

Atoms:
OP1: (27.906,134.819,81.859)
OP2: (27.689,136.958,80.468)
C3': (32.494,136.668,82.034)
C1': (33.503,136.925,79.911)
C5': (30.832,134.896,81.253)
O4': (32.496,135.928,79.847)
C8: (31.882,138.777,79.226)
O2': (34.882,136.486,81.824)
C6: (33.627,140.757,76.879)
C5: (33.050,139.860,77.815)
C4: (33.827,138.793,78.214)
P: (28.365,135.671,80.739)
C4': (32.236,135.433,81.187)
C2': (33.758,137.215,81.394)
C2: (35.489,139.401,76.903)
N1: (34.867,140.481,76.428)
N3: (35.069,138.507,77.790)
N6: (33.024,141.860,76.432)
N7: (31.818,139.834,78.457)
N9: (33.076,138.106,79.146)
O5': (29.911,135.949,80.956)
O3': (32.715,136.359,83.407)
C4: (28.332,140.789,80.653)
N3: (29.016,141.917,80.282)
OP1: (32.485,136.786,85.853)
OP2: (30.463,136.919,84.296)
C2: (30.283,142.280,80.652)
C1': (32.274,141.740,81.977)
C3': (32.532,141.591,84.317)
O5': (32.183,138.695,84.245)
O4': (32.984,140.554,82.299)
C5': (33.504,139.251,84.270)
P: (31.904,137.154,84.544)
C4': (33.489,140.628,83.656)
C2': (32.278,142.620,83.224)
O2': (33.308,143.568,83.090)
N1: (30.921,141.393,81.512)
O4: (27.190,140.624,80.232)
O2: (30.790,143.305,80.246)
C6: (30.286,140.235,81.917)
C5: (29.047,139.912,81.523)
O3': (33.088,142.150,85.491)
Image (generated by PyMOL):
PyMOL image
show in jmol