ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:A509:A510

Extra

PDB:
ATOM 1 O3' A A 508 28.070 134.695 79.093 1.00 27.45 O
ATOM 2 P A A 509 28.114 135.692 80.360 1.00 29.58 P
ATOM 3 OP1 A A 509 27.651 134.973 81.566 1.00 28.27 O
ATOM 4 OP2 A A 509 27.467 136.973 79.975 1.00 28.85 O
ATOM 5 O5' A A 509 29.666 135.962 80.568 1.00 30.95 O
ATOM 6 C5' A A 509 30.569 134.888 80.889 1.00 27.40 C
ATOM 7 C4' A A 509 31.986 135.386 80.811 1.00 26.91 C
ATOM 8 O4' A A 509 32.285 135.772 79.446 1.00 26.68 O
ATOM 9 C3' A A 509 32.274 136.649 81.606 1.00 25.12 C
ATOM 10 O3' A A 509 32.519 136.336 82.979 1.00 25.32 O
ATOM 11 C2' A A 509 33.540 137.143 80.924 1.00 25.09 C
ATOM 12 O2' A A 509 34.656 136.407 81.349 1.00 26.61 O
ATOM 13 C1' A A 509 33.276 136.775 79.462 1.00 25.13 C
ATOM 14 N9 A A 509 32.825 137.922 78.682 1.00 25.91 N
ATOM 15 C8 A A 509 31.611 138.558 78.711 1.00 27.00 C
ATOM 16 N7 A A 509 31.560 139.635 77.963 1.00 27.67 N
ATOM 17 C5 A A 509 32.818 139.695 77.384 1.00 26.87 C
ATOM 18 C6 A A 509 33.410 140.615 76.500 1.00 26.41 C
ATOM 19 N6 A A 509 32.782 141.693 76.032 1.00 27.93 N
ATOM 20 N1 A A 509 34.684 140.385 76.112 1.00 24.61 N
ATOM 21 C2 A A 509 35.306 139.302 76.584 1.00 24.54 C
ATOM 22 N3 A A 509 34.859 138.371 77.422 1.00 27.43 N
ATOM 23 C4 A A 509 33.595 138.631 77.794 1.00 26.52 C
ATOM 24 P U A 510 31.658 137.040 84.139 1.00 27.59 P
ATOM 25 OP1 U A 510 32.250 136.679 85.448 1.00 27.75 O
ATOM 26 OP2 U A 510 30.220 136.776 83.893 1.00 27.19 O
ATOM 27 O5' U A 510 31.919 138.585 83.910 1.00 26.72 O
TER

ATOM 1 O3' A B 509 32.519 136.336 82.979 1.00 25.32 O
ATOM 2 P U B 510 31.658 137.040 84.139 1.00 27.59 P
ATOM 3 OP1 U B 510 32.250 136.679 85.448 1.00 27.75 O
ATOM 4 OP2 U B 510 30.220 136.776 83.893 1.00 27.19 O
ATOM 5 O5' U B 510 31.919 138.585 83.910 1.00 26.72 O
ATOM 6 C5' U B 510 33.246 139.092 83.828 1.00 26.55 C
ATOM 7 C4' U B 510 33.226 140.463 83.208 1.00 28.82 C
ATOM 8 O4' U B 510 32.751 140.380 81.837 1.00 29.31 O
ATOM 9 C3' U B 510 32.263 141.434 83.868 1.00 28.42 C
ATOM 10 O3' U B 510 32.820 141.968 85.067 1.00 28.58 O
ATOM 11 C2' U B 510 32.032 142.456 82.760 1.00 28.03 C
ATOM 12 O2' U B 510 33.097 143.363 82.604 1.00 27.89 O
ATOM 13 C1' U B 510 32.024 141.557 81.518 1.00 28.75 C
ATOM 14 N1 U B 510 30.671 141.183 81.077 1.00 29.72 N
ATOM 15 C2 U B 510 30.002 142.042 80.218 1.00 31.26 C
ATOM 16 O2 U B 510 30.485 143.069 79.792 1.00 33.74 O
ATOM 17 N3 U B 510 28.741 141.649 79.876 1.00 33.15 N
ATOM 18 C4 U B 510 28.086 140.515 80.284 1.00 35.64 C
ATOM 19 O4 U B 510 26.897 140.379 79.993 1.00 37.82 O
ATOM 20 C5 U B 510 28.845 139.666 81.145 1.00 34.23 C
ATOM 21 C6 U B 510 30.078 140.024 81.507 1.00 31.58 C
ATOM 22 P C B 511 31.862 142.665 86.153 1.00 32.40 P
ATOM 23 OP1 C B 511 32.714 142.920 87.348 1.00 31.95 O
ATOM 24 OP2 C B 511 30.625 141.877 86.307 1.00 29.60 O
ATOM 25 O5' C B 511 31.476 144.056 85.472 1.00 31.88 O
TER

Atoms:
OP1: (27.651,134.973,81.566)
OP2: (27.467,136.973,79.975)
C3': (32.274,136.649,81.606)
C1': (33.276,136.775,79.462)
C5': (30.569,134.888,80.889)
O4': (32.285,135.772,79.446)
C8: (31.611,138.558,78.711)
O2': (34.656,136.407,81.349)
C6: (33.410,140.615,76.500)
C5: (32.818,139.695,77.384)
C4: (33.595,138.631,77.794)
P: (28.114,135.692,80.360)
C4': (31.986,135.386,80.811)
C2': (33.540,137.143,80.924)
C2: (35.306,139.302,76.584)
N1: (34.684,140.385,76.112)
N3: (34.859,138.371,77.422)
N6: (32.782,141.693,76.032)
N7: (31.560,139.635,77.963)
N9: (32.825,137.922,78.682)
O5': (29.666,135.962,80.568)
O3': (32.519,136.336,82.979)
C4: (28.086,140.515,80.284)
N3: (28.741,141.649,79.876)
OP1: (32.250,136.679,85.448)
OP2: (30.220,136.776,83.893)
C2: (30.002,142.042,80.218)
C1': (32.024,141.557,81.518)
C3': (32.263,141.434,83.868)
O5': (31.919,138.585,83.910)
O4': (32.751,140.380,81.837)
C5': (33.246,139.092,83.828)
P: (31.658,137.040,84.139)
C4': (33.226,140.463,83.208)
C2': (32.032,142.456,82.760)
O2': (33.097,143.363,82.604)
N1: (30.671,141.183,81.077)
O4: (26.897,140.379,79.993)
O2: (30.485,143.069,79.792)
C6: (30.078,140.024,81.507)
C5: (28.845,139.666,81.145)
O3': (32.820,141.968,85.067)
Image (generated by PyMOL):
PyMOL image
show in jmol