ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1U9S:A128:A129

Extra

PDB:
ATOM 1 O3' A A 127 17.791 17.869 115.220 1.00 79.96 O
ATOM 2 P A A 128 19.190 17.301 115.816 1.00 79.55 P
ATOM 3 OP1 A A 128 18.961 17.008 117.249 1.00 78.13 O
ATOM 4 OP2 A A 128 20.311 18.212 115.432 1.00 71.04 O
ATOM 5 O5' A A 128 19.365 15.890 115.092 1.00 73.80 O
ATOM 6 C5' A A 128 18.443 14.820 115.317 1.00 70.63 C
ATOM 7 C4' A A 128 18.482 13.861 114.150 1.00 76.01 C
ATOM 8 O4' A A 128 18.094 14.567 112.946 1.00 77.72 O
ATOM 9 C3' A A 128 19.840 13.267 113.824 1.00 78.78 C
ATOM 10 O3' A A 128 20.048 12.103 114.614 1.00 83.73 O
ATOM 11 C2' A A 128 19.700 12.933 112.340 1.00 74.37 C
ATOM 12 O2' A A 128 18.952 11.753 112.115 1.00 72.08 O
ATOM 13 C1' A A 128 18.875 14.121 111.847 1.00 73.61 C
ATOM 14 N9 A A 128 19.657 15.272 111.393 1.00 72.20 N
ATOM 15 C8 A A 128 20.301 16.194 112.187 1.00 75.87 C
ATOM 16 N7 A A 128 20.865 17.171 111.515 1.00 76.62 N
ATOM 17 C5 A A 128 20.587 16.864 110.189 1.00 74.00 C
ATOM 18 C6 A A 128 20.907 17.513 108.982 1.00 74.76 C
ATOM 19 N6 A A 128 21.603 18.654 108.913 1.00 76.90 N
ATOM 20 N1 A A 128 20.482 16.945 107.834 1.00 71.25 N
ATOM 21 C2 A A 128 19.786 15.805 107.905 1.00 69.89 C
ATOM 22 N3 A A 128 19.424 15.099 108.974 1.00 69.25 N
ATOM 23 C4 A A 128 19.858 15.689 110.098 1.00 70.59 C
ATOM 24 P C A 129 21.409 11.944 115.452 1.00 83.18 P
ATOM 25 OP1 C A 129 21.687 10.478 115.491 1.00 78.70 O
ATOM 26 OP2 C A 129 21.277 12.701 116.731 1.00 78.30 O
ATOM 27 O5' C A 129 22.503 12.690 114.555 1.00 74.94 O
TER

ATOM 1 O3' A B 128 20.048 12.103 114.614 1.00 83.73 O
ATOM 2 P C B 129 21.409 11.944 115.452 1.00 83.18 P
ATOM 3 OP1 C B 129 21.687 10.478 115.491 1.00 78.70 O
ATOM 4 OP2 C B 129 21.277 12.701 116.731 1.00 78.30 O
ATOM 5 O5' C B 129 22.503 12.690 114.555 1.00 74.94 O
ATOM 6 C5' C B 129 23.316 11.963 113.637 1.00 69.29 C
ATOM 7 C4' C B 129 23.696 12.828 112.459 1.00 62.95 C
ATOM 8 O4' C B 129 22.961 14.074 112.528 1.00 65.88 O
ATOM 9 C3' C B 129 25.136 13.292 112.452 1.00 63.63 C
ATOM 10 O3' C B 129 26.005 12.296 111.939 1.00 69.90 O
ATOM 11 C2' C B 129 25.079 14.539 111.579 1.00 62.55 C
ATOM 12 O2' C B 129 25.025 14.297 110.188 1.00 67.39 O
ATOM 13 C1' C B 129 23.748 15.132 112.006 1.00 59.11 C
ATOM 14 N1 C B 129 23.914 16.163 113.031 1.00 61.15 N
ATOM 15 C2 C B 129 24.494 17.398 112.654 1.00 64.86 C
ATOM 16 O2 C B 129 24.846 17.563 111.470 1.00 67.56 O
ATOM 17 N3 C B 129 24.655 18.364 113.588 1.00 60.59 N
ATOM 18 C4 C B 129 24.269 18.137 114.850 1.00 63.61 C
ATOM 19 N4 C B 129 24.446 19.118 115.744 1.00 64.44 N
ATOM 20 C5 C B 129 23.681 16.891 115.257 1.00 59.03 C
ATOM 21 C6 C B 129 23.524 15.945 114.324 1.00 56.42 C
ATOM 22 P A B 130 27.501 12.173 112.529 1.00 71.41 P
ATOM 23 OP1 A B 130 28.055 10.887 112.024 1.00 64.62 O
ATOM 24 OP2 A B 130 27.381 12.394 113.994 1.00 66.29 O
ATOM 25 O5' A B 130 28.292 13.393 111.852 1.00 63.35 O
TER

Atoms:
OP1: (18.961,17.008,117.249)
OP2: (20.311,18.212,115.432)
C3': (19.840,13.267,113.824)
C1': (18.875,14.121,111.847)
C5': (18.443,14.820,115.317)
O4': (18.094,14.567,112.946)
C8: (20.301,16.194,112.187)
O2': (18.952,11.753,112.115)
C6: (20.907,17.513,108.982)
C5: (20.587,16.864,110.189)
C4: (19.858,15.689,110.098)
P: (19.190,17.301,115.816)
C4': (18.482,13.861,114.150)
C2': (19.700,12.933,112.340)
C2: (19.786,15.805,107.905)
N1: (20.482,16.945,107.834)
N3: (19.424,15.099,108.974)
N6: (21.603,18.654,108.913)
N7: (20.865,17.171,111.515)
N9: (19.657,15.272,111.393)
O5': (19.365,15.890,115.092)
O3': (20.048,12.103,114.614)
C2: (24.494,17.398,112.654)
OP1: (21.687,10.478,115.491)
OP2: (21.277,12.701,116.731)
C4: (24.269,18.137,114.850)
O5': (22.503,12.690,114.555)
C3': (25.136,13.292,112.452)
C1': (23.748,15.132,112.006)
O4': (22.961,14.074,112.528)
C5': (23.316,11.963,113.637)
P: (21.409,11.944,115.452)
O2: (24.846,17.563,111.470)
C4': (23.696,12.828,112.459)
C2': (25.079,14.539,111.579)
O2': (25.025,14.297,110.188)
N1: (23.914,16.163,113.031)
N3: (24.655,18.364,113.588)
N4: (24.446,19.118,115.744)
C6: (23.524,15.945,114.324)
C5: (23.681,16.891,115.257)
O3': (26.005,12.296,111.939)
Image (generated by PyMOL):
PyMOL image
show in jmol