ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ4:0509:0510

Extra

PDB:
ATOM 1 O3' A A 508 28.335 135.265 79.430 1.00 39.99 O
ATOM 2 P A A 509 28.433 136.234 80.703 1.00 41.71 P
ATOM 3 OP1 A A 509 27.997 135.444 81.879 1.00 39.55 O
ATOM 4 OP2 A A 509 27.790 137.542 80.407 1.00 40.98 O
ATOM 5 O5' A A 509 29.985 136.525 80.847 1.00 42.54 O
ATOM 6 C5' A A 509 30.911 135.480 81.172 1.00 39.51 C
ATOM 7 C4' A A 509 32.320 136.013 81.109 1.00 36.90 C
ATOM 8 O4' A A 509 32.592 136.478 79.762 1.00 34.88 O
ATOM 9 C3' A A 509 32.589 137.253 81.947 1.00 35.17 C
ATOM 10 O3' A A 509 32.814 136.916 83.311 1.00 36.04 O
ATOM 11 C2' A A 509 33.855 137.784 81.294 1.00 36.00 C
ATOM 12 O2' A A 509 35.013 137.089 81.701 1.00 38.24 O
ATOM 13 C1' A A 509 33.596 137.468 79.817 1.00 35.25 C
ATOM 14 N9 A A 509 33.166 138.647 79.073 1.00 35.04 N
ATOM 15 C8 A A 509 31.987 139.346 79.166 1.00 35.28 C
ATOM 16 N7 A A 509 31.963 140.437 78.442 1.00 36.96 N
ATOM 17 C5 A A 509 33.198 140.440 77.801 1.00 37.71 C
ATOM 18 C6 A A 509 33.804 141.338 76.892 1.00 36.79 C
ATOM 19 N6 A A 509 33.224 142.456 76.448 1.00 36.00 N
ATOM 20 N1 A A 509 35.044 141.041 76.450 1.00 35.69 N
ATOM 21 C2 A A 509 35.625 139.920 76.882 1.00 34.88 C
ATOM 22 N3 A A 509 35.166 139.004 77.727 1.00 36.32 N
ATOM 23 C4 A A 509 33.935 139.328 78.161 1.00 36.32 C
ATOM 24 P U A 510 31.966 137.642 84.470 1.00 38.57 P
ATOM 25 OP1 U A 510 32.589 137.280 85.763 1.00 39.85 O
ATOM 26 OP2 U A 510 30.519 137.376 84.262 1.00 37.97 O
ATOM 27 O5' U A 510 32.227 139.188 84.225 1.00 35.66 O
TER

ATOM 1 O3' A B 509 32.814 136.916 83.311 1.00 36.04 O
ATOM 2 P U B 510 31.966 137.642 84.470 1.00 38.57 P
ATOM 3 OP1 U B 510 32.589 137.280 85.763 1.00 39.85 O
ATOM 4 OP2 U B 510 30.519 137.376 84.262 1.00 37.97 O
ATOM 5 O5' U B 510 32.227 139.188 84.225 1.00 35.66 O
ATOM 6 C5' U B 510 33.557 139.699 84.168 1.00 38.78 C
ATOM 7 C4' U B 510 33.553 141.086 83.585 1.00 40.31 C
ATOM 8 O4' U B 510 33.119 141.027 82.205 1.00 41.62 O
ATOM 9 C3' U B 510 32.580 142.058 84.226 1.00 41.22 C
ATOM 10 O3' U B 510 33.100 142.616 85.419 1.00 41.36 O
ATOM 11 C2' U B 510 32.405 143.091 83.130 1.00 40.81 C
ATOM 12 O2' U B 510 33.508 143.959 83.054 1.00 42.22 O
ATOM 13 C1' U B 510 32.386 142.199 81.887 1.00 41.27 C
ATOM 14 N1 U B 510 31.024 141.811 81.483 1.00 41.03 N
ATOM 15 C2 U B 510 30.330 142.667 80.641 1.00 41.75 C
ATOM 16 O2 U B 510 30.798 143.709 80.216 1.00 44.26 O
ATOM 17 N3 U B 510 29.065 142.261 80.315 1.00 40.85 N
ATOM 18 C4 U B 510 28.433 141.114 80.727 1.00 42.15 C
ATOM 19 O4 U B 510 27.283 140.888 80.348 1.00 43.30 O
ATOM 20 C5 U B 510 29.215 140.277 81.587 1.00 42.52 C
ATOM 21 C6 U B 510 30.450 140.646 81.927 1.00 40.45 C
ATOM 22 P C B 511 32.105 143.310 86.464 1.00 43.76 P
ATOM 23 OP1 C B 511 32.880 143.525 87.717 1.00 46.03 O
ATOM 24 OP2 C B 511 30.823 142.565 86.514 1.00 42.12 O
ATOM 25 O5' C B 511 31.801 144.723 85.800 1.00 44.58 O
TER

Atoms:
OP1: (27.997,135.444,81.879)
OP2: (27.790,137.542,80.407)
C3': (32.589,137.253,81.947)
C1': (33.596,137.468,79.817)
C5': (30.911,135.480,81.172)
O4': (32.592,136.478,79.762)
C8: (31.987,139.346,79.166)
O2': (35.013,137.089,81.701)
C6: (33.804,141.338,76.892)
C5: (33.198,140.440,77.801)
C4: (33.935,139.328,78.161)
P: (28.433,136.234,80.703)
C4': (32.320,136.013,81.109)
C2': (33.855,137.784,81.294)
C2: (35.625,139.920,76.882)
N1: (35.044,141.041,76.450)
N3: (35.166,139.004,77.727)
N6: (33.224,142.456,76.448)
N7: (31.963,140.437,78.442)
N9: (33.166,138.647,79.073)
O5': (29.985,136.525,80.847)
O3': (32.814,136.916,83.311)
C4: (28.433,141.114,80.727)
N3: (29.065,142.261,80.315)
OP1: (32.589,137.280,85.763)
OP2: (30.519,137.376,84.262)
C2: (30.330,142.667,80.641)
C1': (32.386,142.199,81.887)
C3': (32.580,142.058,84.226)
O5': (32.227,139.188,84.225)
O4': (33.119,141.027,82.205)
C5': (33.557,139.699,84.168)
P: (31.966,137.642,84.470)
C4': (33.553,141.086,83.585)
C2': (32.405,143.091,83.130)
O2': (33.508,143.959,83.054)
N1: (31.024,141.811,81.483)
O4: (27.283,140.888,80.348)
O2: (30.798,143.709,80.216)
C6: (30.450,140.646,81.927)
C5: (29.215,140.277,81.587)
O3': (33.100,142.616,85.419)
Image (generated by PyMOL):
PyMOL image
show in jmol