ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:0509:0510

Extra

PDB:
ATOM 1 O3' A A 508 27.819 133.909 79.318 1.00 33.62 O
ATOM 2 P A A 509 27.859 134.911 80.578 1.00 33.58 P
ATOM 3 OP1 A A 509 27.401 134.124 81.748 1.00 36.88 O
ATOM 4 OP2 A A 509 27.157 136.162 80.226 1.00 35.01 O
ATOM 5 O5' A A 509 29.406 135.241 80.754 1.00 35.56 O
ATOM 6 C5' A A 509 30.354 134.196 81.035 1.00 33.98 C
ATOM 7 C4' A A 509 31.768 134.712 80.915 1.00 35.18 C
ATOM 8 O4' A A 509 32.044 135.123 79.548 1.00 36.20 O
ATOM 9 C3' A A 509 32.119 135.950 81.731 1.00 35.12 C
ATOM 10 O3' A A 509 32.382 135.612 83.090 1.00 35.20 O
ATOM 11 C2' A A 509 33.383 136.436 81.029 1.00 33.75 C
ATOM 12 O2' A A 509 34.546 135.728 81.407 1.00 35.97 O
ATOM 13 C1' A A 509 33.070 136.106 79.563 1.00 35.06 C
ATOM 14 N9 A A 509 32.630 137.291 78.828 1.00 34.37 N
ATOM 15 C8 A A 509 31.433 137.953 78.892 1.00 33.70 C
ATOM 16 N7 A A 509 31.392 139.037 78.158 1.00 33.49 N
ATOM 17 C5 A A 509 32.637 139.080 77.558 1.00 32.12 C
ATOM 18 C6 A A 509 33.220 139.986 76.676 1.00 31.99 C
ATOM 19 N6 A A 509 32.608 141.083 76.232 1.00 32.25 N
ATOM 20 N1 A A 509 34.475 139.732 76.257 1.00 31.06 N
ATOM 21 C2 A A 509 35.091 138.640 76.705 1.00 33.65 C
ATOM 22 N3 A A 509 34.654 137.716 77.546 1.00 32.93 N
ATOM 23 C4 A A 509 33.402 137.999 77.943 1.00 34.43 C
ATOM 24 P U A 510 31.527 136.293 84.271 1.00 37.92 P
ATOM 25 OP1 U A 510 32.161 135.874 85.541 1.00 36.04 O
ATOM 26 OP2 U A 510 30.075 136.052 84.056 1.00 37.52 O
ATOM 27 O5' U A 510 31.791 137.849 84.097 1.00 37.71 O
TER

ATOM 1 O3' A B 509 32.382 135.612 83.090 1.00 35.20 O
ATOM 2 P U B 510 31.527 136.293 84.271 1.00 37.92 P
ATOM 3 OP1 U B 510 32.161 135.874 85.541 1.00 36.04 O
ATOM 4 OP2 U B 510 30.075 136.052 84.056 1.00 37.52 O
ATOM 5 O5' U B 510 31.791 137.849 84.097 1.00 37.71 O
ATOM 6 C5' U B 510 33.126 138.353 83.989 1.00 36.24 C
ATOM 7 C4' U B 510 33.106 139.720 83.370 1.00 37.41 C
ATOM 8 O4' U B 510 32.623 139.651 82.002 1.00 36.71 O
ATOM 9 C3' U B 510 32.161 140.696 84.033 1.00 37.91 C
ATOM 10 O3' U B 510 32.748 141.233 85.203 1.00 40.72 O
ATOM 11 C2' U B 510 31.953 141.730 82.938 1.00 37.29 C
ATOM 12 O2' U B 510 33.038 142.615 82.822 1.00 36.67 O
ATOM 13 C1' U B 510 31.917 140.839 81.691 1.00 37.42 C
ATOM 14 N1 U B 510 30.550 140.486 81.283 1.00 37.67 N
ATOM 15 C2 U B 510 29.875 141.377 80.461 1.00 38.05 C
ATOM 16 O2 U B 510 30.374 142.409 80.046 1.00 37.83 O
ATOM 17 N3 U B 510 28.592 141.011 80.143 1.00 37.34 N
ATOM 18 C4 U B 510 27.933 139.869 80.539 1.00 38.50 C
ATOM 19 O4 U B 510 26.775 139.680 80.165 1.00 37.88 O
ATOM 20 C5 U B 510 28.702 138.992 81.376 1.00 38.47 C
ATOM 21 C6 U B 510 29.950 139.322 81.709 1.00 37.86 C
ATOM 22 P C B 511 31.814 141.892 86.320 1.00 42.57 P
ATOM 23 OP1 C B 511 32.686 142.142 87.500 1.00 44.87 O
ATOM 24 OP2 C B 511 30.586 141.073 86.473 1.00 41.83 O
ATOM 25 O5' C B 511 31.411 143.287 85.672 1.00 41.34 O
TER

Atoms:
OP1: (27.401,134.124,81.748)
OP2: (27.157,136.162,80.226)
C3': (32.119,135.950,81.731)
C1': (33.070,136.106,79.563)
C5': (30.354,134.196,81.035)
O4': (32.044,135.123,79.548)
C8: (31.433,137.953,78.892)
O2': (34.546,135.728,81.407)
C6: (33.220,139.986,76.676)
C5: (32.637,139.080,77.558)
C4: (33.402,137.999,77.943)
P: (27.859,134.911,80.578)
C4': (31.768,134.712,80.915)
C2': (33.383,136.436,81.029)
C2: (35.091,138.640,76.705)
N1: (34.475,139.732,76.257)
N3: (34.654,137.716,77.546)
N6: (32.608,141.083,76.232)
N7: (31.392,139.037,78.158)
N9: (32.630,137.291,78.828)
O5': (29.406,135.241,80.754)
O3': (32.382,135.612,83.090)
C4: (27.933,139.869,80.539)
N3: (28.592,141.011,80.143)
OP1: (32.161,135.874,85.541)
OP2: (30.075,136.052,84.056)
C2: (29.875,141.377,80.461)
C1': (31.917,140.839,81.691)
C3': (32.161,140.696,84.033)
O5': (31.791,137.849,84.097)
O4': (32.623,139.651,82.002)
C5': (33.126,138.353,83.989)
P: (31.527,136.293,84.271)
C4': (33.106,139.720,83.370)
C2': (31.953,141.730,82.938)
O2': (33.038,142.615,82.822)
N1: (30.550,140.486,81.283)
O4: (26.775,139.680,80.165)
O2: (30.374,142.409,80.046)
C6: (29.950,139.322,81.709)
C5: (28.702,138.992,81.376)
O3': (32.748,141.233,85.203)
Image (generated by PyMOL):
PyMOL image
show in jmol