ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:0509:0510

Extra

PDB:
ATOM 1 O3' A A 508 27.801 134.113 79.419 1.00 35.66 O
ATOM 2 P A A 509 27.871 135.111 80.681 1.00 33.74 P
ATOM 3 OP1 A A 509 27.418 134.323 81.843 1.00 36.19 O
ATOM 4 OP2 A A 509 27.191 136.381 80.356 1.00 35.98 O
ATOM 5 O5' A A 509 29.425 135.416 80.854 1.00 35.70 O
ATOM 6 C5' A A 509 30.350 134.359 81.171 1.00 34.38 C
ATOM 7 C4' A A 509 31.776 134.848 81.067 1.00 35.56 C
ATOM 8 O4' A A 509 32.074 135.227 79.696 1.00 37.21 O
ATOM 9 C3' A A 509 32.140 136.090 81.872 1.00 34.90 C
ATOM 10 O3' A A 509 32.385 135.772 83.243 1.00 34.01 O
ATOM 11 C2' A A 509 33.412 136.548 81.165 1.00 34.49 C
ATOM 12 O2' A A 509 34.556 135.802 81.530 1.00 36.36 O
ATOM 13 C1' A A 509 33.087 136.224 79.702 1.00 35.30 C
ATOM 14 N9 A A 509 32.624 137.398 78.963 1.00 34.39 N
ATOM 15 C8 A A 509 31.406 138.022 79.016 1.00 33.69 C
ATOM 16 N7 A A 509 31.336 139.104 78.281 1.00 34.39 N
ATOM 17 C5 A A 509 32.586 139.188 77.693 1.00 34.12 C
ATOM 18 C6 A A 509 33.147 140.112 76.812 1.00 34.74 C
ATOM 19 N6 A A 509 32.504 141.189 76.365 1.00 36.76 N
ATOM 20 N1 A A 509 34.413 139.896 76.398 1.00 34.53 N
ATOM 21 C2 A A 509 35.061 138.826 76.854 1.00 34.35 C
ATOM 22 N3 A A 509 34.647 137.892 77.697 1.00 35.47 N
ATOM 23 C4 A A 509 33.382 138.133 78.085 1.00 35.10 C
ATOM 24 P U A 510 31.509 136.466 84.404 1.00 36.53 P
ATOM 25 OP1 U A 510 32.130 136.040 85.679 1.00 36.79 O
ATOM 26 OP2 U A 510 30.054 136.228 84.181 1.00 34.87 O
ATOM 27 O5' U A 510 31.786 138.024 84.230 1.00 36.91 O
TER

ATOM 1 O3' A B 509 32.385 135.772 83.243 1.00 34.01 O
ATOM 2 P U B 510 31.509 136.466 84.404 1.00 36.53 P
ATOM 3 OP1 U B 510 32.130 136.040 85.679 1.00 36.79 O
ATOM 4 OP2 U B 510 30.054 136.228 84.181 1.00 34.87 O
ATOM 5 O5' U B 510 31.786 138.024 84.230 1.00 36.91 O
ATOM 6 C5' U B 510 33.132 138.521 84.132 1.00 35.99 C
ATOM 7 C4' U B 510 33.128 139.894 83.516 1.00 37.63 C
ATOM 8 O4' U B 510 32.664 139.828 82.143 1.00 36.74 O
ATOM 9 C3' U B 510 32.178 140.875 84.168 1.00 38.79 C
ATOM 10 O3' U B 510 32.749 141.421 85.343 1.00 41.44 O
ATOM 11 C2' U B 510 31.971 141.907 83.069 1.00 37.72 C
ATOM 12 O2' U B 510 33.021 142.837 82.967 1.00 35.99 O
ATOM 13 C1' U B 510 31.968 141.018 81.822 1.00 37.75 C
ATOM 14 N1 U B 510 30.610 140.669 81.386 1.00 39.57 N
ATOM 15 C2 U B 510 29.962 141.555 80.541 1.00 38.81 C
ATOM 16 O2 U B 510 30.479 142.567 80.125 1.00 39.63 O
ATOM 17 N3 U B 510 28.682 141.205 80.205 1.00 38.52 N
ATOM 18 C4 U B 510 27.999 140.080 80.606 1.00 39.49 C
ATOM 19 O4 U B 510 26.842 139.907 80.223 1.00 40.02 O
ATOM 20 C5 U B 510 28.743 139.199 81.461 1.00 39.81 C
ATOM 21 C6 U B 510 29.990 139.514 81.811 1.00 39.13 C
ATOM 22 P C B 511 31.801 142.090 86.437 1.00 42.30 P
ATOM 23 OP1 C B 511 32.648 142.316 87.639 1.00 46.33 O
ATOM 24 OP2 C B 511 30.574 141.259 86.550 1.00 44.36 O
ATOM 25 O5' C B 511 31.411 143.494 85.794 1.00 42.29 O
TER

Atoms:
OP1: (27.418,134.323,81.843)
OP2: (27.191,136.381,80.356)
C3': (32.140,136.090,81.872)
C1': (33.087,136.224,79.702)
C5': (30.350,134.359,81.171)
O4': (32.074,135.227,79.696)
C8: (31.406,138.022,79.016)
O2': (34.556,135.802,81.530)
C6: (33.147,140.112,76.812)
C5: (32.586,139.188,77.693)
C4: (33.382,138.133,78.085)
P: (27.871,135.111,80.681)
C4': (31.776,134.848,81.067)
C2': (33.412,136.548,81.165)
C2: (35.061,138.826,76.854)
N1: (34.413,139.896,76.398)
N3: (34.647,137.892,77.697)
N6: (32.504,141.189,76.365)
N7: (31.336,139.104,78.281)
N9: (32.624,137.398,78.963)
O5': (29.425,135.416,80.854)
O3': (32.385,135.772,83.243)
C4: (27.999,140.080,80.606)
N3: (28.682,141.205,80.205)
OP1: (32.130,136.040,85.679)
OP2: (30.054,136.228,84.181)
C2: (29.962,141.555,80.541)
C1': (31.968,141.018,81.822)
C3': (32.178,140.875,84.168)
O5': (31.786,138.024,84.230)
O4': (32.664,139.828,82.143)
C5': (33.132,138.521,84.132)
P: (31.509,136.466,84.404)
C4': (33.128,139.894,83.516)
C2': (31.971,141.907,83.069)
O2': (33.021,142.837,82.967)
N1: (30.610,140.669,81.386)
O4: (26.842,139.907,80.223)
O2: (30.479,142.567,80.125)
C6: (29.990,139.514,81.811)
C5: (28.743,139.199,81.461)
O3': (32.749,141.421,85.343)
Image (generated by PyMOL):
PyMOL image
show in jmol