ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:0509:0510

Extra

PDB:
ATOM 1 O3' A A 508 27.860 133.784 79.421 1.00 32.36 O
ATOM 2 P A A 509 27.878 134.796 80.673 1.00 32.49 P
ATOM 3 OP1 A A 509 27.395 134.041 81.850 1.00 35.24 O
ATOM 4 OP2 A A 509 27.203 136.054 80.288 1.00 33.50 O
ATOM 5 O5' A A 509 29.422 135.120 80.872 1.00 33.82 O
ATOM 6 C5' A A 509 30.366 134.067 81.128 1.00 34.00 C
ATOM 7 C4' A A 509 31.778 134.585 80.996 1.00 33.37 C
ATOM 8 O4' A A 509 32.011 135.031 79.632 1.00 34.37 O
ATOM 9 C3' A A 509 32.130 135.819 81.820 1.00 33.21 C
ATOM 10 O3' A A 509 32.408 135.494 83.180 1.00 32.10 O
ATOM 11 C2' A A 509 33.379 136.322 81.103 1.00 31.02 C
ATOM 12 O2' A A 509 34.544 135.603 81.441 1.00 34.43 O
ATOM 13 C1' A A 509 33.044 136.006 79.641 1.00 33.79 C
ATOM 14 N9 A A 509 32.613 137.195 78.912 1.00 32.49 N
ATOM 15 C8 A A 509 31.414 137.855 78.947 1.00 32.89 C
ATOM 16 N7 A A 509 31.388 138.940 78.210 1.00 32.77 N
ATOM 17 C5 A A 509 32.648 138.985 77.641 1.00 32.02 C
ATOM 18 C6 A A 509 33.250 139.885 76.758 1.00 31.52 C
ATOM 19 N6 A A 509 32.646 140.980 76.292 1.00 31.92 N
ATOM 20 N1 A A 509 34.516 139.628 76.368 1.00 31.12 N
ATOM 21 C2 A A 509 35.128 138.546 76.848 1.00 32.16 C
ATOM 22 N3 A A 509 34.674 137.630 77.691 1.00 31.82 N
ATOM 23 C4 A A 509 33.409 137.910 78.053 1.00 33.77 C
ATOM 24 P U A 510 31.561 136.185 84.365 1.00 35.78 P
ATOM 25 OP1 U A 510 32.171 135.764 85.646 1.00 34.75 O
ATOM 26 OP2 U A 510 30.105 135.959 84.135 1.00 36.76 O
ATOM 27 O5' U A 510 31.839 137.739 84.200 1.00 35.65 O
TER

ATOM 1 O3' A B 509 32.408 135.494 83.180 1.00 32.10 O
ATOM 2 P U B 510 31.561 136.185 84.365 1.00 35.78 P
ATOM 3 OP1 U B 510 32.171 135.764 85.646 1.00 34.75 O
ATOM 4 OP2 U B 510 30.105 135.959 84.135 1.00 36.76 O
ATOM 5 O5' U B 510 31.839 137.739 84.200 1.00 35.65 O
ATOM 6 C5' U B 510 33.172 138.234 84.089 1.00 34.98 C
ATOM 7 C4' U B 510 33.153 139.595 83.454 1.00 36.61 C
ATOM 8 O4' U B 510 32.638 139.498 82.099 1.00 36.19 O
ATOM 9 C3' U B 510 32.221 140.595 84.107 1.00 37.13 C
ATOM 10 O3' U B 510 32.797 141.165 85.267 1.00 40.22 O
ATOM 11 C2' U B 510 32.023 141.610 82.994 1.00 37.08 C
ATOM 12 O2' U B 510 33.132 142.457 82.839 1.00 38.74 O
ATOM 13 C1' U B 510 31.957 140.695 81.770 1.00 36.63 C
ATOM 14 N1 U B 510 30.580 140.369 81.380 1.00 37.20 N
ATOM 15 C2 U B 510 29.935 141.249 80.526 1.00 36.81 C
ATOM 16 O2 U B 510 30.463 142.265 80.091 1.00 36.28 O
ATOM 17 N3 U B 510 28.650 140.899 80.199 1.00 35.61 N
ATOM 18 C4 U B 510 27.959 139.786 80.626 1.00 36.63 C
ATOM 19 O4 U B 510 26.806 139.607 80.236 1.00 36.90 O
ATOM 20 C5 U B 510 28.691 138.928 81.511 1.00 36.98 C
ATOM 21 C6 U B 510 29.944 139.238 81.846 1.00 36.98 C
ATOM 22 P C B 511 31.845 141.805 86.385 1.00 40.99 P
ATOM 23 OP1 C B 511 32.690 142.006 87.587 1.00 44.43 O
ATOM 24 OP2 C B 511 30.610 140.992 86.482 1.00 42.54 O
ATOM 25 O5' C B 511 31.450 143.216 85.766 1.00 41.05 O
TER

Atoms:
OP1: (27.395,134.041,81.850)
OP2: (27.203,136.054,80.288)
C3': (32.130,135.819,81.820)
C1': (33.044,136.006,79.641)
C5': (30.366,134.067,81.128)
O4': (32.011,135.031,79.632)
C8: (31.414,137.855,78.947)
O2': (34.544,135.603,81.441)
C6: (33.250,139.885,76.758)
C5: (32.648,138.985,77.641)
C4: (33.409,137.910,78.053)
P: (27.878,134.796,80.673)
C4': (31.778,134.585,80.996)
C2': (33.379,136.322,81.103)
C2: (35.128,138.546,76.848)
N1: (34.516,139.628,76.368)
N3: (34.674,137.630,77.691)
N6: (32.646,140.980,76.292)
N7: (31.388,138.940,78.210)
N9: (32.613,137.195,78.912)
O5': (29.422,135.120,80.872)
O3': (32.408,135.494,83.180)
C4: (27.959,139.786,80.626)
N3: (28.650,140.899,80.199)
OP1: (32.171,135.764,85.646)
OP2: (30.105,135.959,84.135)
C2: (29.935,141.249,80.526)
C1': (31.957,140.695,81.770)
C3': (32.221,140.595,84.107)
O5': (31.839,137.739,84.200)
O4': (32.638,139.498,82.099)
C5': (33.172,138.234,84.089)
P: (31.561,136.185,84.365)
C4': (33.153,139.595,83.454)
C2': (32.023,141.610,82.994)
O2': (33.132,142.457,82.839)
N1: (30.580,140.369,81.380)
O4: (26.806,139.607,80.236)
O2: (30.463,142.265,80.091)
C6: (29.944,139.238,81.846)
C5: (28.691,138.928,81.511)
O3': (32.797,141.165,85.267)
Image (generated by PyMOL):
PyMOL image
show in jmol