ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:0509:0510

Extra

PDB:
ATOM 1 O3' A A 508 28.197 134.739 79.152 1.00 36.23 O
ATOM 2 P A A 509 28.212 135.715 80.436 1.00 38.66 P
ATOM 3 OP1 A A 509 27.739 134.910 81.586 1.00 38.05 O
ATOM 4 OP2 A A 509 27.541 137.004 80.110 1.00 36.67 O
ATOM 5 O5' A A 509 29.752 136.022 80.686 1.00 38.53 O
ATOM 6 C5' A A 509 30.687 134.964 80.943 1.00 34.97 C
ATOM 7 C4' A A 509 32.101 135.489 80.857 1.00 34.27 C
ATOM 8 O4' A A 509 32.397 135.898 79.496 1.00 34.69 O
ATOM 9 C3' A A 509 32.414 136.738 81.667 1.00 32.11 C
ATOM 10 O3' A A 509 32.664 136.419 83.033 1.00 33.38 O
ATOM 11 C2' A A 509 33.692 137.216 80.994 1.00 32.75 C
ATOM 12 O2' A A 509 34.829 136.498 81.411 1.00 34.78 O
ATOM 13 C1' A A 509 33.420 136.875 79.526 1.00 32.83 C
ATOM 14 N9 A A 509 32.996 138.055 78.780 1.00 33.61 N
ATOM 15 C8 A A 509 31.808 138.742 78.856 1.00 34.47 C
ATOM 16 N7 A A 509 31.789 139.840 78.140 1.00 36.04 N
ATOM 17 C5 A A 509 33.036 139.859 77.526 1.00 36.64 C
ATOM 18 C6 A A 509 33.647 140.771 76.648 1.00 36.03 C
ATOM 19 N6 A A 509 33.067 141.899 76.227 1.00 37.38 N
ATOM 20 N1 A A 509 34.895 140.487 76.216 1.00 34.37 N
ATOM 21 C2 A A 509 35.482 139.368 76.645 1.00 33.75 C
ATOM 22 N3 A A 509 35.019 138.442 77.476 1.00 36.13 N
ATOM 23 C4 A A 509 33.776 138.750 77.888 1.00 35.60 C
ATOM 24 P U A 510 31.787 137.100 84.197 1.00 36.24 P
ATOM 25 OP1 U A 510 32.416 136.715 85.481 1.00 37.46 O
ATOM 26 OP2 U A 510 30.349 136.813 83.975 1.00 35.22 O
ATOM 27 O5' U A 510 32.030 138.657 84.001 1.00 35.50 O
TER

ATOM 1 O3' A B 509 32.664 136.419 83.033 1.00 33.38 O
ATOM 2 P U B 510 31.787 137.100 84.197 1.00 36.24 P
ATOM 3 OP1 U B 510 32.416 136.715 85.481 1.00 37.46 O
ATOM 4 OP2 U B 510 30.349 136.813 83.975 1.00 35.22 O
ATOM 5 O5' U B 510 32.030 138.657 84.001 1.00 35.50 O
ATOM 6 C5' U B 510 33.358 139.176 83.927 1.00 37.65 C
ATOM 7 C4' U B 510 33.345 140.549 83.317 1.00 39.74 C
ATOM 8 O4' U B 510 32.900 140.475 81.939 1.00 39.08 O
ATOM 9 C3' U B 510 32.389 141.535 83.959 1.00 40.06 C
ATOM 10 O3' U B 510 32.958 142.098 85.132 1.00 40.87 O
ATOM 11 C2' U B 510 32.205 142.556 82.849 1.00 38.98 C
ATOM 12 O2' U B 510 33.306 143.425 82.749 1.00 39.46 O
ATOM 13 C1' U B 510 32.178 141.651 81.614 1.00 39.27 C
ATOM 14 N1 U B 510 30.813 141.272 81.215 1.00 40.32 N
ATOM 15 C2 U B 510 30.114 142.142 80.396 1.00 39.23 C
ATOM 16 O2 U B 510 30.580 143.185 79.984 1.00 40.24 O
ATOM 17 N3 U B 510 28.844 141.745 80.080 1.00 39.69 N
ATOM 18 C4 U B 510 28.209 140.593 80.483 1.00 41.58 C
ATOM 19 O4 U B 510 27.041 140.391 80.141 1.00 44.18 O
ATOM 20 C5 U B 510 28.999 139.738 81.317 1.00 41.53 C
ATOM 21 C6 U B 510 30.240 140.097 81.645 1.00 40.21 C
ATOM 22 P C B 511 32.010 142.806 86.217 1.00 44.56 P
ATOM 23 OP1 C B 511 32.857 143.055 87.419 1.00 45.22 O
ATOM 24 OP2 C B 511 30.742 142.049 86.357 1.00 42.36 O
ATOM 25 O5' C B 511 31.660 144.208 85.550 1.00 43.91 O
TER

Atoms:
OP1: (27.739,134.910,81.586)
OP2: (27.541,137.004,80.110)
C3': (32.414,136.738,81.667)
C1': (33.420,136.875,79.526)
C5': (30.687,134.964,80.943)
O4': (32.397,135.898,79.496)
C8: (31.808,138.742,78.856)
O2': (34.829,136.498,81.411)
C6: (33.647,140.771,76.648)
C5: (33.036,139.859,77.526)
C4: (33.776,138.750,77.888)
P: (28.212,135.715,80.436)
C4': (32.101,135.489,80.857)
C2': (33.692,137.216,80.994)
C2: (35.482,139.368,76.645)
N1: (34.895,140.487,76.216)
N3: (35.019,138.442,77.476)
N6: (33.067,141.899,76.227)
N7: (31.789,139.840,78.140)
N9: (32.996,138.055,78.780)
O5': (29.752,136.022,80.686)
O3': (32.664,136.419,83.033)
C4: (28.209,140.593,80.483)
N3: (28.844,141.745,80.080)
OP1: (32.416,136.715,85.481)
OP2: (30.349,136.813,83.975)
C2: (30.114,142.142,80.396)
C1': (32.178,141.651,81.614)
C3': (32.389,141.535,83.959)
O5': (32.030,138.657,84.001)
O4': (32.900,140.475,81.939)
C5': (33.358,139.176,83.927)
P: (31.787,137.100,84.197)
C4': (33.345,140.549,83.317)
C2': (32.205,142.556,82.849)
O2': (33.306,143.425,82.749)
N1: (30.813,141.272,81.215)
O4: (27.041,140.391,80.141)
O2: (30.580,143.185,79.984)
C6: (30.240,140.097,81.645)
C5: (28.999,139.738,81.317)
O3': (32.958,142.098,85.132)
Image (generated by PyMOL):
PyMOL image
show in jmol