Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0509:0510
Extra
PDB:
ATOM 1 O3' A A 508 28.130 134.924 79.159 1.00 30.90 O
ATOM 2 P A A 509 28.174 135.902 80.434 1.00 32.91 P
ATOM 3 OP1 A A 509 27.693 135.121 81.597 1.00 32.88 O
ATOM 4 OP2 A A 509 27.529 137.200 80.097 1.00 33.50 O
ATOM 5 O5' A A 509 29.720 136.185 80.666 1.00 34.17 O
ATOM 6 C5' A A 509 30.645 135.117 80.915 1.00 31.95 C
ATOM 7 C4' A A 509 32.059 135.635 80.839 1.00 31.30 C
ATOM 8 O4' A A 509 32.340 136.090 79.490 1.00 31.36 O
ATOM 9 C3' A A 509 32.356 136.870 81.676 1.00 30.03 C
ATOM 10 O3' A A 509 32.595 136.533 83.039 1.00 30.70 O
ATOM 11 C2' A A 509 33.630 137.378 81.019 1.00 29.83 C
ATOM 12 O2' A A 509 34.763 136.662 81.446 1.00 30.65 O
ATOM 13 C1' A A 509 33.368 137.063 79.541 1.00 30.05 C
ATOM 14 N9 A A 509 32.960 138.252 78.795 1.00 30.25 N
ATOM 15 C8 A A 509 31.794 138.971 78.899 1.00 30.30 C
ATOM 16 N7 A A 509 31.786 140.070 78.185 1.00 30.13 N
ATOM 17 C5 A A 509 33.015 140.057 77.539 1.00 30.30 C
ATOM 18 C6 A A 509 33.632 140.960 76.650 1.00 28.77 C
ATOM 19 N6 A A 509 33.071 142.102 76.244 1.00 28.52 N
ATOM 20 N1 A A 509 34.864 140.649 76.193 1.00 27.15 N
ATOM 21 C2 A A 509 35.429 139.514 76.601 1.00 26.78 C
ATOM 22 N3 A A 509 34.958 138.591 77.435 1.00 30.60 N
ATOM 23 C4 A A 509 33.734 138.927 77.879 1.00 30.03 C
ATOM 24 P U A 510 31.733 137.229 84.201 1.00 32.92 P
ATOM 25 OP1 U A 510 32.341 136.862 85.498 1.00 33.89 O
ATOM 26 OP2 U A 510 30.298 136.941 83.963 1.00 33.09 O
ATOM 27 O5' U A 510 31.982 138.782 83.984 1.00 30.79 O
TER
ATOM 1 O3' A B 509 32.595 136.533 83.039 1.00 30.70 O
ATOM 2 P U B 510 31.733 137.229 84.201 1.00 32.92 P
ATOM 3 OP1 U B 510 32.341 136.862 85.498 1.00 33.89 O
ATOM 4 OP2 U B 510 30.298 136.941 83.963 1.00 33.09 O
ATOM 5 O5' U B 510 31.982 138.782 83.984 1.00 30.79 O
ATOM 6 C5' U B 510 33.310 139.303 83.942 1.00 32.94 C
ATOM 7 C4' U B 510 33.313 140.688 83.346 1.00 34.59 C
ATOM 8 O4' U B 510 32.893 140.632 81.960 1.00 34.20 O
ATOM 9 C3' U B 510 32.358 141.685 83.976 1.00 34.20 C
ATOM 10 O3' U B 510 32.901 142.235 85.163 1.00 34.32 O
ATOM 11 C2' U B 510 32.214 142.715 82.870 1.00 33.30 C
ATOM 12 O2' U B 510 33.344 143.546 82.781 1.00 33.83 O
ATOM 13 C1' U B 510 32.187 141.819 81.633 1.00 34.01 C
ATOM 14 N1 U B 510 30.821 141.463 81.218 1.00 34.91 N
ATOM 15 C2 U B 510 30.159 142.337 80.373 1.00 35.00 C
ATOM 16 O2 U B 510 30.654 143.368 79.967 1.00 36.95 O
ATOM 17 N3 U B 510 28.890 141.961 80.025 1.00 35.45 N
ATOM 18 C4 U B 510 28.224 140.828 80.424 1.00 37.55 C
ATOM 19 O4 U B 510 27.070 140.634 80.032 1.00 39.95 O
ATOM 20 C5 U B 510 28.973 139.971 81.297 1.00 36.67 C
ATOM 21 C6 U B 510 30.212 140.309 81.654 1.00 34.42 C
ATOM 22 P C B 511 31.933 142.952 86.221 1.00 37.00 P
ATOM 23 OP1 C B 511 32.749 143.221 87.438 1.00 38.58 O
ATOM 24 OP2 C B 511 30.671 142.188 86.342 1.00 36.69 O
ATOM 25 O5' C B 511 31.594 144.343 85.528 1.00 37.26 O
TER
ATOM 2 P A A 509 28.174 135.902 80.434 1.00 32.91 P
ATOM 3 OP1 A A 509 27.693 135.121 81.597 1.00 32.88 O
ATOM 4 OP2 A A 509 27.529 137.200 80.097 1.00 33.50 O
ATOM 5 O5' A A 509 29.720 136.185 80.666 1.00 34.17 O
ATOM 6 C5' A A 509 30.645 135.117 80.915 1.00 31.95 C
ATOM 7 C4' A A 509 32.059 135.635 80.839 1.00 31.30 C
ATOM 8 O4' A A 509 32.340 136.090 79.490 1.00 31.36 O
ATOM 9 C3' A A 509 32.356 136.870 81.676 1.00 30.03 C
ATOM 10 O3' A A 509 32.595 136.533 83.039 1.00 30.70 O
ATOM 11 C2' A A 509 33.630 137.378 81.019 1.00 29.83 C
ATOM 12 O2' A A 509 34.763 136.662 81.446 1.00 30.65 O
ATOM 13 C1' A A 509 33.368 137.063 79.541 1.00 30.05 C
ATOM 14 N9 A A 509 32.960 138.252 78.795 1.00 30.25 N
ATOM 15 C8 A A 509 31.794 138.971 78.899 1.00 30.30 C
ATOM 16 N7 A A 509 31.786 140.070 78.185 1.00 30.13 N
ATOM 17 C5 A A 509 33.015 140.057 77.539 1.00 30.30 C
ATOM 18 C6 A A 509 33.632 140.960 76.650 1.00 28.77 C
ATOM 19 N6 A A 509 33.071 142.102 76.244 1.00 28.52 N
ATOM 20 N1 A A 509 34.864 140.649 76.193 1.00 27.15 N
ATOM 21 C2 A A 509 35.429 139.514 76.601 1.00 26.78 C
ATOM 22 N3 A A 509 34.958 138.591 77.435 1.00 30.60 N
ATOM 23 C4 A A 509 33.734 138.927 77.879 1.00 30.03 C
ATOM 24 P U A 510 31.733 137.229 84.201 1.00 32.92 P
ATOM 25 OP1 U A 510 32.341 136.862 85.498 1.00 33.89 O
ATOM 26 OP2 U A 510 30.298 136.941 83.963 1.00 33.09 O
ATOM 27 O5' U A 510 31.982 138.782 83.984 1.00 30.79 O
TER
ATOM 1 O3' A B 509 32.595 136.533 83.039 1.00 30.70 O
ATOM 2 P U B 510 31.733 137.229 84.201 1.00 32.92 P
ATOM 3 OP1 U B 510 32.341 136.862 85.498 1.00 33.89 O
ATOM 4 OP2 U B 510 30.298 136.941 83.963 1.00 33.09 O
ATOM 5 O5' U B 510 31.982 138.782 83.984 1.00 30.79 O
ATOM 6 C5' U B 510 33.310 139.303 83.942 1.00 32.94 C
ATOM 7 C4' U B 510 33.313 140.688 83.346 1.00 34.59 C
ATOM 8 O4' U B 510 32.893 140.632 81.960 1.00 34.20 O
ATOM 9 C3' U B 510 32.358 141.685 83.976 1.00 34.20 C
ATOM 10 O3' U B 510 32.901 142.235 85.163 1.00 34.32 O
ATOM 11 C2' U B 510 32.214 142.715 82.870 1.00 33.30 C
ATOM 12 O2' U B 510 33.344 143.546 82.781 1.00 33.83 O
ATOM 13 C1' U B 510 32.187 141.819 81.633 1.00 34.01 C
ATOM 14 N1 U B 510 30.821 141.463 81.218 1.00 34.91 N
ATOM 15 C2 U B 510 30.159 142.337 80.373 1.00 35.00 C
ATOM 16 O2 U B 510 30.654 143.368 79.967 1.00 36.95 O
ATOM 17 N3 U B 510 28.890 141.961 80.025 1.00 35.45 N
ATOM 18 C4 U B 510 28.224 140.828 80.424 1.00 37.55 C
ATOM 19 O4 U B 510 27.070 140.634 80.032 1.00 39.95 O
ATOM 20 C5 U B 510 28.973 139.971 81.297 1.00 36.67 C
ATOM 21 C6 U B 510 30.212 140.309 81.654 1.00 34.42 C
ATOM 22 P C B 511 31.933 142.952 86.221 1.00 37.00 P
ATOM 23 OP1 C B 511 32.749 143.221 87.438 1.00 38.58 O
ATOM 24 OP2 C B 511 30.671 142.188 86.342 1.00 36.69 O
ATOM 25 O5' C B 511 31.594 144.343 85.528 1.00 37.26 O
TER
Atoms:
OP1: (27.693,135.121,81.597)
OP2: (27.529,137.200,80.097)
C3': (32.356,136.870,81.676)
C1': (33.368,137.063,79.541)
C5': (30.645,135.117,80.915)
O4': (32.340,136.090,79.490)
C8: (31.794,138.971,78.899)
O2': (34.763,136.662,81.446)
C6: (33.632,140.960,76.650)
C5: (33.015,140.057,77.539)
C4: (33.734,138.927,77.879)
P: (28.174,135.902,80.434)
C4': (32.059,135.635,80.839)
C2': (33.630,137.378,81.019)
C2: (35.429,139.514,76.601)
N1: (34.864,140.649,76.193)
N3: (34.958,138.591,77.435)
N6: (33.071,142.102,76.244)
N7: (31.786,140.070,78.185)
N9: (32.960,138.252,78.795)
O5': (29.720,136.185,80.666)
O3': (32.595,136.533,83.039)
OP2: (27.529,137.200,80.097)
C3': (32.356,136.870,81.676)
C1': (33.368,137.063,79.541)
C5': (30.645,135.117,80.915)
O4': (32.340,136.090,79.490)
C8: (31.794,138.971,78.899)
O2': (34.763,136.662,81.446)
C6: (33.632,140.960,76.650)
C5: (33.015,140.057,77.539)
C4: (33.734,138.927,77.879)
P: (28.174,135.902,80.434)
C4': (32.059,135.635,80.839)
C2': (33.630,137.378,81.019)
C2: (35.429,139.514,76.601)
N1: (34.864,140.649,76.193)
N3: (34.958,138.591,77.435)
N6: (33.071,142.102,76.244)
N7: (31.786,140.070,78.185)
N9: (32.960,138.252,78.795)
O5': (29.720,136.185,80.666)
O3': (32.595,136.533,83.039)
C4: (28.224,140.828,80.424)
N3: (28.890,141.961,80.025)
OP1: (32.341,136.862,85.498)
OP2: (30.298,136.941,83.963)
C2: (30.159,142.337,80.373)
C1': (32.187,141.819,81.633)
C3': (32.358,141.685,83.976)
O5': (31.982,138.782,83.984)
O4': (32.893,140.632,81.960)
C5': (33.310,139.303,83.942)
P: (31.733,137.229,84.201)
C4': (33.313,140.688,83.346)
C2': (32.214,142.715,82.870)
O2': (33.344,143.546,82.781)
N1: (30.821,141.463,81.218)
O4: (27.070,140.634,80.032)
O2: (30.654,143.368,79.967)
C6: (30.212,140.309,81.654)
C5: (28.973,139.971,81.297)
O3': (32.901,142.235,85.163)
N3: (28.890,141.961,80.025)
OP1: (32.341,136.862,85.498)
OP2: (30.298,136.941,83.963)
C2: (30.159,142.337,80.373)
C1': (32.187,141.819,81.633)
C3': (32.358,141.685,83.976)
O5': (31.982,138.782,83.984)
O4': (32.893,140.632,81.960)
C5': (33.310,139.303,83.942)
P: (31.733,137.229,84.201)
C4': (33.313,140.688,83.346)
C2': (32.214,142.715,82.870)
O2': (33.344,143.546,82.781)
N1: (30.821,141.463,81.218)
O4: (27.070,140.634,80.032)
O2: (30.654,143.368,79.967)
C6: (30.212,140.309,81.654)
C5: (28.973,139.971,81.297)
O3': (32.901,142.235,85.163)
Image (generated by PyMOL):