ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:0509:0510

Extra

PDB:
ATOM 1 O3' A A 508 28.463 135.109 79.483 1.00 43.56 O
ATOM 2 P A A 509 28.447 136.105 80.745 1.00 44.66 P
ATOM 3 OP1 A A 509 27.886 135.368 81.893 1.00 43.66 O
ATOM 4 OP2 A A 509 27.850 137.403 80.343 1.00 45.02 O
ATOM 5 O5' A A 509 29.985 136.378 81.036 1.00 46.52 O
ATOM 6 C5' A A 509 30.922 135.301 81.201 1.00 43.82 C
ATOM 7 C4' A A 509 32.328 135.837 81.106 1.00 41.81 C
ATOM 8 O4' A A 509 32.542 136.367 79.779 1.00 41.11 O
ATOM 9 C3' A A 509 32.590 137.062 81.960 1.00 40.51 C
ATOM 10 O3' A A 509 32.839 136.710 83.301 1.00 41.75 O
ATOM 11 C2' A A 509 33.831 137.646 81.309 1.00 40.58 C
ATOM 12 O2' A A 509 35.021 137.033 81.739 1.00 43.75 O
ATOM 13 C1' A A 509 33.587 137.317 79.835 1.00 41.37 C
ATOM 14 N9 A A 509 33.206 138.502 79.074 1.00 40.67 N
ATOM 15 C8 A A 509 32.051 139.230 79.159 1.00 40.87 C
ATOM 16 N7 A A 509 32.058 140.315 78.424 1.00 43.10 N
ATOM 17 C5 A A 509 33.293 140.282 77.790 1.00 42.97 C
ATOM 18 C6 A A 509 33.922 141.161 76.887 1.00 42.62 C
ATOM 19 N6 A A 509 33.368 142.294 76.458 1.00 44.24 N
ATOM 20 N1 A A 509 35.155 140.831 76.437 1.00 40.72 N
ATOM 21 C2 A A 509 35.708 139.699 76.872 1.00 39.52 C
ATOM 22 N3 A A 509 35.223 138.797 77.726 1.00 41.50 N
ATOM 23 C4 A A 509 33.997 139.154 78.156 1.00 42.05 C
ATOM 24 P U A 510 32.047 137.457 84.475 1.00 44.57 P
ATOM 25 OP1 U A 510 32.752 137.104 85.726 1.00 44.85 O
ATOM 26 OP2 U A 510 30.595 137.173 84.347 1.00 41.88 O
ATOM 27 O5' U A 510 32.297 138.996 84.172 1.00 40.64 O
TER

ATOM 1 O3' A B 509 32.839 136.710 83.301 1.00 41.75 O
ATOM 2 P U B 510 32.047 137.457 84.475 1.00 44.57 P
ATOM 3 OP1 U B 510 32.752 137.104 85.726 1.00 44.85 O
ATOM 4 OP2 U B 510 30.595 137.173 84.347 1.00 41.88 O
ATOM 5 O5' U B 510 32.297 138.996 84.172 1.00 40.64 O
ATOM 6 C5' U B 510 33.624 139.507 84.087 1.00 41.08 C
ATOM 7 C4' U B 510 33.618 140.894 83.498 1.00 42.06 C
ATOM 8 O4' U B 510 33.159 140.846 82.124 1.00 42.88 O
ATOM 9 C3' U B 510 32.692 141.894 84.156 1.00 41.44 C
ATOM 10 O3' U B 510 33.257 142.441 85.335 1.00 41.34 O
ATOM 11 C2' U B 510 32.526 142.927 83.056 1.00 42.03 C
ATOM 12 O2' U B 510 33.656 143.757 82.946 1.00 39.08 O
ATOM 13 C1' U B 510 32.440 142.029 81.819 1.00 43.13 C
ATOM 14 N1 U B 510 31.060 141.657 81.456 1.00 44.02 N
ATOM 15 C2 U B 510 30.324 142.544 80.684 1.00 45.21 C
ATOM 16 O2 U B 510 30.763 143.609 80.293 1.00 46.06 O
ATOM 17 N3 U B 510 29.047 142.137 80.387 1.00 47.58 N
ATOM 18 C4 U B 510 28.438 140.960 80.773 1.00 49.33 C
ATOM 19 O4 U B 510 27.266 140.744 80.450 1.00 51.12 O
ATOM 20 C5 U B 510 29.262 140.097 81.564 1.00 49.01 C
ATOM 21 C6 U B 510 30.510 140.467 81.871 1.00 46.01 C
ATOM 22 P C B 511 32.307 143.169 86.408 1.00 46.02 P
ATOM 23 OP1 C B 511 33.181 143.440 87.589 1.00 44.75 O
ATOM 24 OP2 C B 511 31.034 142.415 86.592 1.00 40.47 O
ATOM 25 O5' C B 511 31.934 144.552 85.702 1.00 47.18 O
TER

Atoms:
OP1: (27.886,135.368,81.893)
OP2: (27.850,137.403,80.343)
C3': (32.590,137.062,81.960)
C1': (33.587,137.317,79.835)
C5': (30.922,135.301,81.201)
O4': (32.542,136.367,79.779)
C8: (32.051,139.230,79.159)
O2': (35.021,137.033,81.739)
C6: (33.922,141.161,76.887)
C5: (33.293,140.282,77.790)
C4: (33.997,139.154,78.156)
P: (28.447,136.105,80.745)
C4': (32.328,135.837,81.106)
C2': (33.831,137.646,81.309)
C2: (35.708,139.699,76.872)
N1: (35.155,140.831,76.437)
N3: (35.223,138.797,77.726)
N6: (33.368,142.294,76.458)
N7: (32.058,140.315,78.424)
N9: (33.206,138.502,79.074)
O5': (29.985,136.378,81.036)
O3': (32.839,136.710,83.301)
C4: (28.438,140.960,80.773)
N3: (29.047,142.137,80.387)
OP1: (32.752,137.104,85.726)
OP2: (30.595,137.173,84.347)
C2: (30.324,142.544,80.684)
C1': (32.440,142.029,81.819)
C3': (32.692,141.894,84.156)
O5': (32.297,138.996,84.172)
O4': (33.159,140.846,82.124)
C5': (33.624,139.507,84.087)
P: (32.047,137.457,84.475)
C4': (33.618,140.894,83.498)
C2': (32.526,142.927,83.056)
O2': (33.656,143.757,82.946)
N1: (31.060,141.657,81.456)
O4: (27.266,140.744,80.450)
O2: (30.763,143.609,80.293)
C6: (30.510,140.467,81.871)
C5: (29.262,140.097,81.564)
O3': (33.257,142.441,85.335)
Image (generated by PyMOL):
PyMOL image
show in jmol