ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:0509:0510

Extra

PDB:
ATOM 1 O3' A A 508 28.105 134.736 79.159 1.00 36.01 O
ATOM 2 P A A 509 28.185 135.750 80.406 1.00 35.89 P
ATOM 3 OP1 A A 509 27.750 135.051 81.632 1.00 35.48 O
ATOM 4 OP2 A A 509 27.522 137.014 80.009 1.00 35.62 O
ATOM 5 O5' A A 509 29.741 136.028 80.572 1.00 36.85 O
ATOM 6 C5' A A 509 30.643 134.961 80.904 1.00 35.67 C
ATOM 7 C4' A A 509 32.069 135.450 80.865 1.00 34.21 C
ATOM 8 O4' A A 509 32.438 135.812 79.512 1.00 34.34 O
ATOM 9 C3' A A 509 32.357 136.707 81.664 1.00 33.13 C
ATOM 10 O3' A A 509 32.547 136.381 83.030 1.00 34.58 O
ATOM 11 C2' A A 509 33.655 137.179 81.028 1.00 33.53 C
ATOM 12 O2' A A 509 34.770 136.440 81.472 1.00 34.65 O
ATOM 13 C1' A A 509 33.411 136.841 79.556 1.00 34.34 C
ATOM 14 N9 A A 509 32.931 137.993 78.795 1.00 34.43 N
ATOM 15 C8 A A 509 31.698 138.590 78.835 1.00 34.90 C
ATOM 16 N7 A A 509 31.606 139.660 78.087 1.00 35.64 N
ATOM 17 C5 A A 509 32.858 139.764 77.500 1.00 34.89 C
ATOM 18 C6 A A 509 33.411 140.701 76.613 1.00 34.80 C
ATOM 19 N6 A A 509 32.748 141.761 76.147 1.00 34.79 N
ATOM 20 N1 A A 509 34.688 140.512 76.219 1.00 34.19 N
ATOM 21 C2 A A 509 35.354 139.457 76.690 1.00 34.18 C
ATOM 22 N3 A A 509 34.948 138.516 77.532 1.00 35.08 N
ATOM 23 C4 A A 509 33.676 138.731 77.908 1.00 34.52 C
ATOM 24 P U A 510 31.647 137.080 84.158 1.00 34.20 P
ATOM 25 OP1 U A 510 32.205 136.621 85.448 1.00 33.02 O
ATOM 26 OP2 U A 510 30.208 136.873 83.866 1.00 35.07 O
ATOM 27 O5' U A 510 31.939 138.633 83.985 1.00 34.61 O
TER

ATOM 1 O3' A B 509 32.547 136.381 83.030 1.00 34.58 O
ATOM 2 P U B 510 31.647 137.080 84.158 1.00 34.20 P
ATOM 3 OP1 U B 510 32.205 136.621 85.448 1.00 33.02 O
ATOM 4 OP2 U B 510 30.208 136.873 83.866 1.00 35.07 O
ATOM 5 O5' U B 510 31.939 138.633 83.985 1.00 34.61 O
ATOM 6 C5' U B 510 33.281 139.133 83.887 1.00 33.14 C
ATOM 7 C4' U B 510 33.268 140.514 83.277 1.00 32.80 C
ATOM 8 O4' U B 510 32.794 140.436 81.906 1.00 32.66 O
ATOM 9 C3' U B 510 32.314 141.498 83.928 1.00 31.40 C
ATOM 10 O3' U B 510 32.866 142.070 85.104 1.00 32.05 O
ATOM 11 C2' U B 510 32.100 142.515 82.819 1.00 30.65 C
ATOM 12 O2' U B 510 33.184 143.406 82.700 1.00 29.54 O
ATOM 13 C1' U B 510 32.061 141.608 81.587 1.00 31.82 C
ATOM 14 N1 U B 510 30.701 141.219 81.186 1.00 31.97 N
ATOM 15 C2 U B 510 29.997 142.076 80.348 1.00 32.54 C
ATOM 16 O2 U B 510 30.450 143.117 79.923 1.00 32.30 O
ATOM 17 N3 U B 510 28.734 141.664 80.026 1.00 35.04 N
ATOM 18 C4 U B 510 28.105 140.510 80.440 1.00 37.37 C
ATOM 19 O4 U B 510 26.946 140.284 80.071 1.00 38.49 O
ATOM 20 C5 U B 510 28.898 139.673 81.296 1.00 36.82 C
ATOM 21 C6 U B 510 30.136 140.048 81.629 1.00 33.02 C
ATOM 22 P C B 511 31.896 142.764 86.180 1.00 32.90 P
ATOM 23 OP1 C B 511 32.720 143.013 87.394 1.00 32.26 O
ATOM 24 OP2 C B 511 30.653 141.973 86.289 1.00 30.86 O
ATOM 25 O5' C B 511 31.525 144.166 85.511 1.00 34.59 O
TER

Atoms:
OP1: (27.750,135.051,81.632)
OP2: (27.522,137.014,80.009)
C3': (32.357,136.707,81.664)
C1': (33.411,136.841,79.556)
C5': (30.643,134.961,80.904)
O4': (32.438,135.812,79.512)
C8: (31.698,138.590,78.835)
O2': (34.770,136.440,81.472)
C6: (33.411,140.701,76.613)
C5: (32.858,139.764,77.500)
C4: (33.676,138.731,77.908)
P: (28.185,135.750,80.406)
C4': (32.069,135.450,80.865)
C2': (33.655,137.179,81.028)
C2: (35.354,139.457,76.690)
N1: (34.688,140.512,76.219)
N3: (34.948,138.516,77.532)
N6: (32.748,141.761,76.147)
N7: (31.606,139.660,78.087)
N9: (32.931,137.993,78.795)
O5': (29.741,136.028,80.572)
O3': (32.547,136.381,83.030)
C4: (28.105,140.510,80.440)
N3: (28.734,141.664,80.026)
OP1: (32.205,136.621,85.448)
OP2: (30.208,136.873,83.866)
C2: (29.997,142.076,80.348)
C1': (32.061,141.608,81.587)
C3': (32.314,141.498,83.928)
O5': (31.939,138.633,83.985)
O4': (32.794,140.436,81.906)
C5': (33.281,139.133,83.887)
P: (31.647,137.080,84.158)
C4': (33.268,140.514,83.277)
C2': (32.100,142.515,82.819)
O2': (33.184,143.406,82.700)
N1: (30.701,141.219,81.186)
O4: (26.946,140.284,80.071)
O2: (30.450,143.117,79.923)
C6: (30.136,140.048,81.629)
C5: (28.898,139.673,81.296)
O3': (32.866,142.070,85.104)
Image (generated by PyMOL):
PyMOL image
show in jmol