ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A1471:A1472

Extra

PDB:
ATOM 1 O3' G A1470 10.576 -33.489 12.617 1.00 65.09 O
ATOM 2 P G A1471 11.060 -34.738 11.737 1.00 77.33 P
ATOM 3 OP1 G A1471 11.864 -34.210 10.607 1.00 64.63 O
ATOM 4 OP2 G A1471 9.873 -35.579 11.446 1.00 64.43 O
ATOM 5 O5' G A1471 12.023 -35.529 12.723 1.00 59.51 O
ATOM 6 C5' G A1471 13.345 -35.032 13.019 1.00 59.51 C
ATOM 7 C4' G A1471 13.813 -35.556 14.353 1.00 59.51 C
ATOM 8 O4' G A1471 12.982 -34.986 15.398 1.00 59.51 O
ATOM 9 C3' G A1471 13.693 -37.063 14.522 1.00 59.51 C
ATOM 10 O3' G A1471 14.824 -37.757 13.996 1.00 59.51 O
ATOM 11 C2' G A1471 13.540 -37.215 16.031 1.00 59.51 C
ATOM 12 O2' G A1471 14.775 -37.207 16.716 1.00 59.51 O
ATOM 13 C1' G A1471 12.731 -35.963 16.389 1.00 59.51 C
ATOM 14 N9 G A1471 11.296 -36.221 16.387 1.00 45.57 N
ATOM 15 C8 G A1471 10.486 -36.334 15.282 1.00 45.50 C
ATOM 16 N7 G A1471 9.246 -36.588 15.580 1.00 45.46 N
ATOM 17 C5 G A1471 9.233 -36.640 16.964 1.00 45.47 C
ATOM 18 C6 G A1471 8.172 -36.877 17.844 1.00 45.52 C
ATOM 19 O6 G A1471 6.995 -37.107 17.569 1.00 45.57 O
ATOM 20 N1 G A1471 8.584 -36.834 19.172 1.00 45.52 N
ATOM 21 C2 G A1471 9.867 -36.601 19.592 1.00 45.49 C
ATOM 22 N2 G A1471 10.062 -36.607 20.917 1.00 45.54 N
ATOM 23 N3 G A1471 10.879 -36.380 18.772 1.00 45.44 N
ATOM 24 C4 G A1471 10.490 -36.412 17.479 1.00 45.46 C
ATOM 25 P U A1472 14.612 -38.903 12.879 1.00 78.70 P
ATOM 26 OP1 U A1472 15.906 -39.605 12.730 1.00112.39 O
ATOM 27 OP2 U A1472 13.966 -38.304 11.687 1.00112.32 O
ATOM 28 O5' U A1472 13.581 -39.920 13.542 1.00110.27 O
TER

ATOM 1 O3' G B1471 14.824 -37.757 13.996 1.00 59.51 O
ATOM 2 P U B1472 14.612 -38.903 12.879 1.00 78.70 P
ATOM 3 OP1 U B1472 15.906 -39.605 12.730 1.00112.39 O
ATOM 4 OP2 U B1472 13.966 -38.304 11.687 1.00112.32 O
ATOM 5 O5' U B1472 13.581 -39.920 13.542 1.00110.27 O
ATOM 6 C5' U B1472 13.776 -40.398 14.887 1.00110.27 C
ATOM 7 C4' U B1472 12.473 -40.905 15.463 1.00110.27 C
ATOM 8 O4' U B1472 11.491 -39.831 15.476 1.00110.27 O
ATOM 9 C3' U B1472 11.793 -42.027 14.696 1.00110.27 C
ATOM 10 O3' U B1472 12.337 -43.305 15.027 1.00110.27 O
ATOM 11 C2' U B1472 10.333 -41.878 15.117 1.00110.27 C
ATOM 12 O2' U B1472 10.047 -42.465 16.371 1.00110.27 O
ATOM 13 C1' U B1472 10.193 -40.358 15.238 1.00110.27 C
ATOM 14 N1 U B1472 9.643 -39.748 14.012 1.00 72.54 N
ATOM 15 C2 U B1472 8.330 -40.055 13.659 1.00 72.54 C
ATOM 16 O2 U B1472 7.611 -40.773 14.335 1.00 72.54 O
ATOM 17 N3 U B1472 7.895 -39.489 12.484 1.00 72.54 N
ATOM 18 C4 U B1472 8.614 -38.661 11.642 1.00 72.54 C
ATOM 19 O4 U B1472 8.094 -38.253 10.598 1.00 72.54 O
ATOM 20 C5 U B1472 9.946 -38.377 12.082 1.00 72.54 C
ATOM 21 C6 U B1472 10.402 -38.912 13.221 1.00 72.54 C
ATOM 22 P G B1473 12.266 -44.510 13.956 1.00105.84 P
ATOM 23 OP1 G B1473 13.294 -45.498 14.365 1.00111.70 O
ATOM 24 OP2 G B1473 12.294 -43.945 12.578 1.00111.49 O
ATOM 25 O5' G B1473 10.827 -45.158 14.188 1.00137.04 O
TER

Atoms:
OP1: (11.864,-34.210,10.607)
OP2: (9.873,-35.579,11.446)
C3': (13.693,-37.063,14.522)
C1': (12.731,-35.963,16.389)
C5': (13.345,-35.032,13.019)
O6: (6.995,-37.107,17.569)
O4': (12.982,-34.986,15.398)
C8: (10.486,-36.334,15.282)
C2: (9.867,-36.601,19.592)
C6: (8.172,-36.877,17.844)
C5: (9.233,-36.640,16.964)
C4: (10.490,-36.412,17.479)
P: (11.060,-34.738,11.737)
C4': (13.813,-35.556,14.353)
C2': (13.540,-37.215,16.031)
O2': (14.775,-37.207,16.716)
N1: (8.584,-36.834,19.172)
N2: (10.062,-36.607,20.917)
N3: (10.879,-36.380,18.772)
N7: (9.246,-36.588,15.580)
N9: (11.296,-36.221,16.387)
O5': (12.023,-35.529,12.723)
O3': (14.824,-37.757,13.996)
C4: (8.614,-38.661,11.642)
N3: (7.895,-39.489,12.484)
OP1: (15.906,-39.605,12.730)
OP2: (13.966,-38.304,11.687)
C2: (8.330,-40.055,13.659)
C1': (10.193,-40.358,15.238)
C3': (11.793,-42.027,14.696)
O5': (13.581,-39.920,13.542)
O4': (11.491,-39.831,15.476)
C5': (13.776,-40.398,14.887)
P: (14.612,-38.903,12.879)
C4': (12.473,-40.905,15.463)
C2': (10.333,-41.878,15.117)
O2': (10.047,-42.465,16.371)
N1: (9.643,-39.748,14.012)
O4: (8.094,-38.253,10.598)
O2: (7.611,-40.773,14.335)
C6: (10.402,-38.912,13.221)
C5: (9.946,-38.377,12.082)
O3': (12.337,-43.305,15.027)
Image (generated by PyMOL):
PyMOL image
show in jmol