ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CMA:0509:0510

Extra

PDB:
ATOM 1 O3' A A 508 27.935 133.499 78.931 1.00 27.15 O
ATOM 2 P A A 509 27.918 134.504 80.175 1.00 27.68 P
ATOM 3 OP1 A A 509 27.410 133.740 81.333 1.00 30.29 O
ATOM 4 OP2 A A 509 27.232 135.750 79.763 1.00 28.81 O
ATOM 5 O5' A A 509 29.454 134.824 80.425 1.00 28.12 O
ATOM 6 C5' A A 509 30.391 133.765 80.654 1.00 27.98 C
ATOM 7 C4' A A 509 31.803 134.289 80.571 1.00 30.12 C
ATOM 8 O4' A A 509 32.102 134.742 79.225 1.00 28.56 O
ATOM 9 C3' A A 509 32.114 135.505 81.428 1.00 30.89 C
ATOM 10 O3' A A 509 32.358 135.116 82.777 1.00 33.74 O
ATOM 11 C2' A A 509 33.379 136.032 80.766 1.00 28.54 C
ATOM 12 O2' A A 509 34.517 135.302 81.156 1.00 29.91 O
ATOM 13 C1' A A 509 33.099 135.742 79.288 1.00 28.66 C
ATOM 14 N9 A A 509 32.640 136.922 78.561 1.00 29.59 N
ATOM 15 C8 A A 509 31.452 137.598 78.674 1.00 29.66 C
ATOM 16 N7 A A 509 31.383 138.672 77.923 1.00 29.34 N
ATOM 17 C5 A A 509 32.600 138.693 77.260 1.00 29.98 C
ATOM 18 C6 A A 509 33.153 139.580 76.328 1.00 30.19 C
ATOM 19 N6 A A 509 32.535 140.675 75.891 1.00 32.05 N
ATOM 20 N1 A A 509 34.385 139.304 75.853 1.00 30.77 N
ATOM 21 C2 A A 509 35.014 138.212 76.296 1.00 29.93 C
ATOM 22 N3 A A 509 34.605 137.308 77.174 1.00 30.09 N
ATOM 23 C4 A A 509 33.375 137.609 77.626 1.00 30.47 C
ATOM 24 P U A 510 31.610 135.875 83.982 1.00 34.08 P
ATOM 25 OP1 U A 510 32.357 135.512 85.204 1.00 34.39 O
ATOM 26 OP2 U A 510 30.150 135.616 83.912 1.00 35.26 O
ATOM 27 O5' U A 510 31.849 137.417 83.678 1.00 32.99 O
TER

ATOM 1 O3' A B 509 32.358 135.116 82.777 1.00 33.74 O
ATOM 2 P U B 510 31.610 135.875 83.982 1.00 34.08 P
ATOM 3 OP1 U B 510 32.357 135.512 85.204 1.00 34.39 O
ATOM 4 OP2 U B 510 30.150 135.616 83.912 1.00 35.26 O
ATOM 5 O5' U B 510 31.849 137.417 83.678 1.00 32.99 O
ATOM 6 C5' U B 510 33.173 137.936 83.525 1.00 32.78 C
ATOM 7 C4' U B 510 33.121 139.322 82.940 1.00 33.40 C
ATOM 8 O4' U B 510 32.646 139.273 81.571 1.00 34.77 O
ATOM 9 C3' U B 510 32.164 140.279 83.618 1.00 33.22 C
ATOM 10 O3' U B 510 32.738 140.823 84.788 1.00 33.02 O
ATOM 11 C2' U B 510 31.950 141.327 82.539 1.00 33.30 C
ATOM 12 O2' U B 510 33.038 142.214 82.432 1.00 33.58 O
ATOM 13 C1' U B 510 31.912 140.454 81.285 1.00 34.31 C
ATOM 14 N1 U B 510 30.541 140.081 80.906 1.00 34.43 N
ATOM 15 C2 U B 510 29.829 140.972 80.124 1.00 34.79 C
ATOM 16 O2 U B 510 30.292 142.025 79.727 1.00 35.48 O
ATOM 17 N3 U B 510 28.553 140.582 79.820 1.00 35.91 N
ATOM 18 C4 U B 510 27.930 139.416 80.203 1.00 37.90 C
ATOM 19 O4 U B 510 26.776 139.201 79.833 1.00 40.39 O
ATOM 20 C5 U B 510 28.732 138.542 81.004 1.00 37.67 C
ATOM 21 C6 U B 510 29.977 138.895 81.319 1.00 35.72 C
ATOM 22 P C B 511 31.798 141.527 85.872 1.00 32.65 P
ATOM 23 OP1 C B 511 32.670 141.829 87.043 1.00 33.93 O
ATOM 24 OP2 C B 511 30.577 140.699 86.055 1.00 30.44 O
ATOM 25 O5' C B 511 31.392 142.901 85.179 1.00 30.63 O
TER

Atoms:
OP1: (27.410,133.740,81.333)
OP2: (27.232,135.750,79.763)
C3': (32.114,135.505,81.428)
C1': (33.099,135.742,79.288)
C5': (30.391,133.765,80.654)
O4': (32.102,134.742,79.225)
C8: (31.452,137.598,78.674)
O2': (34.517,135.302,81.156)
C6: (33.153,139.580,76.328)
C5: (32.600,138.693,77.260)
C4: (33.375,137.609,77.626)
P: (27.918,134.504,80.175)
C4': (31.803,134.289,80.571)
C2': (33.379,136.032,80.766)
C2: (35.014,138.212,76.296)
N1: (34.385,139.304,75.853)
N3: (34.605,137.308,77.174)
N6: (32.535,140.675,75.891)
N7: (31.383,138.672,77.923)
N9: (32.640,136.922,78.561)
O5': (29.454,134.824,80.425)
O3': (32.358,135.116,82.777)
C4: (27.930,139.416,80.203)
N3: (28.553,140.582,79.820)
OP1: (32.357,135.512,85.204)
OP2: (30.150,135.616,83.912)
C2: (29.829,140.972,80.124)
C1': (31.912,140.454,81.285)
C3': (32.164,140.279,83.618)
O5': (31.849,137.417,83.678)
O4': (32.646,139.273,81.571)
C5': (33.173,137.936,83.525)
P: (31.610,135.875,83.982)
C4': (33.121,139.322,82.940)
C2': (31.950,141.327,82.539)
O2': (33.038,142.214,82.432)
N1: (30.541,140.081,80.906)
O4: (26.776,139.201,79.833)
O2: (30.292,142.025,79.727)
C6: (29.977,138.895,81.319)
C5: (28.732,138.542,81.004)
O3': (32.738,140.823,84.788)
Image (generated by PyMOL):
PyMOL image
show in jmol