Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1477:A1478
Extra
PDB:
ATOM 1 O3' G A1476 -10.017 -33.674 -13.231 1.00 94.61 O
ATOM 2 P G A1477 -10.219 -35.023 -12.372 1.00 93.27 P
ATOM 3 OP1 G A1477 -10.895 -34.662 -11.102 1.00 85.52 O
ATOM 4 OP2 G A1477 -8.910 -35.732 -12.329 1.00 86.54 O
ATOM 5 O5' G A1477 -11.265 -35.853 -13.241 1.00 93.11 O
ATOM 6 C5' G A1477 -12.543 -35.300 -13.558 1.00 93.18 C
ATOM 7 C4' G A1477 -12.932 -35.639 -14.980 1.00 94.98 C
ATOM 8 O4' G A1477 -12.002 -35.020 -15.911 1.00 90.96 O
ATOM 9 C3' G A1477 -12.918 -37.115 -15.352 1.00100.09 C
ATOM 10 O3' G A1477 -14.104 -37.792 -14.937 1.00102.90 O
ATOM 11 C2' G A1477 -12.753 -37.077 -16.870 1.00101.54 C
ATOM 12 O2' G A1477 -13.968 -36.908 -17.574 1.00109.38 O
ATOM 13 C1' G A1477 -11.868 -35.840 -17.060 1.00 94.82 C
ATOM 14 N9 G A1477 -10.460 -36.186 -17.235 1.00 89.67 N
ATOM 15 C8 G A1477 -9.594 -36.655 -16.279 1.00 93.96 C
ATOM 16 N7 G A1477 -8.408 -36.922 -16.750 1.00 93.91 N
ATOM 17 C5 G A1477 -8.491 -36.601 -18.095 1.00 88.99 C
ATOM 18 C6 G A1477 -7.518 -36.690 -19.126 1.00 86.96 C
ATOM 19 O6 G A1477 -6.349 -37.092 -19.054 1.00 84.52 O
ATOM 20 N1 G A1477 -8.022 -36.249 -20.344 1.00 89.15 N
ATOM 21 C2 G A1477 -9.300 -35.784 -20.548 1.00 92.38 C
ATOM 22 N2 G A1477 -9.595 -35.383 -21.796 1.00 91.24 N
ATOM 23 N3 G A1477 -10.218 -35.710 -19.599 1.00 96.65 N
ATOM 24 C4 G A1477 -9.749 -36.132 -18.407 1.00 91.03 C
ATOM 25 P U A1478 -14.011 -38.923 -13.796 1.00109.47 P
ATOM 26 OP1 U A1478 -15.367 -39.485 -13.571 1.00107.17 O
ATOM 27 OP2 U A1478 -13.301 -38.269 -12.668 1.00105.54 O
ATOM 28 O5' U A1478 -13.071 -40.045 -14.448 1.00101.25 O
TER
ATOM 1 O3' G B1477 -14.104 -37.792 -14.937 1.00102.90 O
ATOM 2 P U B1478 -14.011 -38.923 -13.796 1.00109.47 P
ATOM 3 OP1 U B1478 -15.367 -39.485 -13.571 1.00107.17 O
ATOM 4 OP2 U B1478 -13.301 -38.269 -12.668 1.00105.54 O
ATOM 5 O5' U B1478 -13.071 -40.045 -14.448 1.00101.25 O
ATOM 6 C5' U B1478 -13.321 -40.512 -15.780 1.00100.89 C
ATOM 7 C4' U B1478 -12.071 -41.101 -16.413 1.00 97.16 C
ATOM 8 O4' U B1478 -11.013 -40.105 -16.461 1.00101.34 O
ATOM 9 C3' U B1478 -11.401 -42.280 -15.728 1.00 97.37 C
ATOM 10 O3' U B1478 -11.994 -43.536 -15.968 1.00102.49 O
ATOM 11 C2' U B1478 -9.997 -42.244 -16.308 1.00 95.87 C
ATOM 12 O2' U B1478 -9.927 -42.816 -17.602 1.00 88.67 O
ATOM 13 C1' U B1478 -9.740 -40.743 -16.369 1.00 97.32 C
ATOM 14 N1 U B1478 -9.073 -40.315 -15.129 1.00 92.39 N
ATOM 15 C2 U B1478 -7.682 -40.189 -15.122 1.00 88.10 C
ATOM 16 O2 U B1478 -6.981 -40.407 -16.094 1.00 88.43 O
ATOM 17 N3 U B1478 -7.146 -39.800 -13.926 1.00 84.25 N
ATOM 18 C4 U B1478 -7.829 -39.533 -12.758 1.00 89.41 C
ATOM 19 O4 U B1478 -7.206 -39.136 -11.770 1.00 89.95 O
ATOM 20 C5 U B1478 -9.248 -39.693 -12.841 1.00 90.66 C
ATOM 21 C6 U B1478 -9.805 -40.063 -13.990 1.00 91.58 C
ATOM 22 P G B1479 -11.783 -44.705 -14.886 1.00107.14 P
ATOM 23 OP1 G B1479 -12.691 -45.823 -15.240 1.00113.57 O
ATOM 24 OP2 G B1479 -11.881 -44.068 -13.539 1.00100.91 O
ATOM 25 O5' G B1479 -10.276 -45.184 -15.099 1.00 96.14 O
TER
ATOM 2 P G A1477 -10.219 -35.023 -12.372 1.00 93.27 P
ATOM 3 OP1 G A1477 -10.895 -34.662 -11.102 1.00 85.52 O
ATOM 4 OP2 G A1477 -8.910 -35.732 -12.329 1.00 86.54 O
ATOM 5 O5' G A1477 -11.265 -35.853 -13.241 1.00 93.11 O
ATOM 6 C5' G A1477 -12.543 -35.300 -13.558 1.00 93.18 C
ATOM 7 C4' G A1477 -12.932 -35.639 -14.980 1.00 94.98 C
ATOM 8 O4' G A1477 -12.002 -35.020 -15.911 1.00 90.96 O
ATOM 9 C3' G A1477 -12.918 -37.115 -15.352 1.00100.09 C
ATOM 10 O3' G A1477 -14.104 -37.792 -14.937 1.00102.90 O
ATOM 11 C2' G A1477 -12.753 -37.077 -16.870 1.00101.54 C
ATOM 12 O2' G A1477 -13.968 -36.908 -17.574 1.00109.38 O
ATOM 13 C1' G A1477 -11.868 -35.840 -17.060 1.00 94.82 C
ATOM 14 N9 G A1477 -10.460 -36.186 -17.235 1.00 89.67 N
ATOM 15 C8 G A1477 -9.594 -36.655 -16.279 1.00 93.96 C
ATOM 16 N7 G A1477 -8.408 -36.922 -16.750 1.00 93.91 N
ATOM 17 C5 G A1477 -8.491 -36.601 -18.095 1.00 88.99 C
ATOM 18 C6 G A1477 -7.518 -36.690 -19.126 1.00 86.96 C
ATOM 19 O6 G A1477 -6.349 -37.092 -19.054 1.00 84.52 O
ATOM 20 N1 G A1477 -8.022 -36.249 -20.344 1.00 89.15 N
ATOM 21 C2 G A1477 -9.300 -35.784 -20.548 1.00 92.38 C
ATOM 22 N2 G A1477 -9.595 -35.383 -21.796 1.00 91.24 N
ATOM 23 N3 G A1477 -10.218 -35.710 -19.599 1.00 96.65 N
ATOM 24 C4 G A1477 -9.749 -36.132 -18.407 1.00 91.03 C
ATOM 25 P U A1478 -14.011 -38.923 -13.796 1.00109.47 P
ATOM 26 OP1 U A1478 -15.367 -39.485 -13.571 1.00107.17 O
ATOM 27 OP2 U A1478 -13.301 -38.269 -12.668 1.00105.54 O
ATOM 28 O5' U A1478 -13.071 -40.045 -14.448 1.00101.25 O
TER
ATOM 1 O3' G B1477 -14.104 -37.792 -14.937 1.00102.90 O
ATOM 2 P U B1478 -14.011 -38.923 -13.796 1.00109.47 P
ATOM 3 OP1 U B1478 -15.367 -39.485 -13.571 1.00107.17 O
ATOM 4 OP2 U B1478 -13.301 -38.269 -12.668 1.00105.54 O
ATOM 5 O5' U B1478 -13.071 -40.045 -14.448 1.00101.25 O
ATOM 6 C5' U B1478 -13.321 -40.512 -15.780 1.00100.89 C
ATOM 7 C4' U B1478 -12.071 -41.101 -16.413 1.00 97.16 C
ATOM 8 O4' U B1478 -11.013 -40.105 -16.461 1.00101.34 O
ATOM 9 C3' U B1478 -11.401 -42.280 -15.728 1.00 97.37 C
ATOM 10 O3' U B1478 -11.994 -43.536 -15.968 1.00102.49 O
ATOM 11 C2' U B1478 -9.997 -42.244 -16.308 1.00 95.87 C
ATOM 12 O2' U B1478 -9.927 -42.816 -17.602 1.00 88.67 O
ATOM 13 C1' U B1478 -9.740 -40.743 -16.369 1.00 97.32 C
ATOM 14 N1 U B1478 -9.073 -40.315 -15.129 1.00 92.39 N
ATOM 15 C2 U B1478 -7.682 -40.189 -15.122 1.00 88.10 C
ATOM 16 O2 U B1478 -6.981 -40.407 -16.094 1.00 88.43 O
ATOM 17 N3 U B1478 -7.146 -39.800 -13.926 1.00 84.25 N
ATOM 18 C4 U B1478 -7.829 -39.533 -12.758 1.00 89.41 C
ATOM 19 O4 U B1478 -7.206 -39.136 -11.770 1.00 89.95 O
ATOM 20 C5 U B1478 -9.248 -39.693 -12.841 1.00 90.66 C
ATOM 21 C6 U B1478 -9.805 -40.063 -13.990 1.00 91.58 C
ATOM 22 P G B1479 -11.783 -44.705 -14.886 1.00107.14 P
ATOM 23 OP1 G B1479 -12.691 -45.823 -15.240 1.00113.57 O
ATOM 24 OP2 G B1479 -11.881 -44.068 -13.539 1.00100.91 O
ATOM 25 O5' G B1479 -10.276 -45.184 -15.099 1.00 96.14 O
TER
Atoms:
OP1: (-10.895,-34.662,-11.102)
OP2: (-8.910,-35.732,-12.329)
C3': (-12.918,-37.115,-15.352)
C1': (-11.868,-35.840,-17.060)
C5': (-12.543,-35.300,-13.558)
O6: (-6.349,-37.092,-19.054)
O4': (-12.002,-35.020,-15.911)
C8: (-9.594,-36.655,-16.279)
C2: (-9.300,-35.784,-20.548)
C6: (-7.518,-36.690,-19.126)
C5: (-8.491,-36.601,-18.095)
C4: (-9.749,-36.132,-18.407)
P: (-10.219,-35.023,-12.372)
C4': (-12.932,-35.639,-14.980)
C2': (-12.753,-37.077,-16.870)
O2': (-13.968,-36.908,-17.574)
N1: (-8.022,-36.249,-20.344)
N2: (-9.595,-35.383,-21.796)
N3: (-10.218,-35.710,-19.599)
N7: (-8.408,-36.922,-16.750)
N9: (-10.460,-36.186,-17.235)
O5': (-11.265,-35.853,-13.241)
O3': (-14.104,-37.792,-14.937)
OP2: (-8.910,-35.732,-12.329)
C3': (-12.918,-37.115,-15.352)
C1': (-11.868,-35.840,-17.060)
C5': (-12.543,-35.300,-13.558)
O6: (-6.349,-37.092,-19.054)
O4': (-12.002,-35.020,-15.911)
C8: (-9.594,-36.655,-16.279)
C2: (-9.300,-35.784,-20.548)
C6: (-7.518,-36.690,-19.126)
C5: (-8.491,-36.601,-18.095)
C4: (-9.749,-36.132,-18.407)
P: (-10.219,-35.023,-12.372)
C4': (-12.932,-35.639,-14.980)
C2': (-12.753,-37.077,-16.870)
O2': (-13.968,-36.908,-17.574)
N1: (-8.022,-36.249,-20.344)
N2: (-9.595,-35.383,-21.796)
N3: (-10.218,-35.710,-19.599)
N7: (-8.408,-36.922,-16.750)
N9: (-10.460,-36.186,-17.235)
O5': (-11.265,-35.853,-13.241)
O3': (-14.104,-37.792,-14.937)
C4: (-7.829,-39.533,-12.758)
N3: (-7.146,-39.800,-13.926)
OP1: (-15.367,-39.485,-13.571)
OP2: (-13.301,-38.269,-12.668)
C2: (-7.682,-40.189,-15.122)
C1': (-9.740,-40.743,-16.369)
C3': (-11.401,-42.280,-15.728)
O5': (-13.071,-40.045,-14.448)
O4': (-11.013,-40.105,-16.461)
C5': (-13.321,-40.512,-15.780)
P: (-14.011,-38.923,-13.796)
C4': (-12.071,-41.101,-16.413)
C2': (-9.997,-42.244,-16.308)
O2': (-9.927,-42.816,-17.602)
N1: (-9.073,-40.315,-15.129)
O4: (-7.206,-39.136,-11.770)
O2: (-6.981,-40.407,-16.094)
C6: (-9.805,-40.063,-13.990)
C5: (-9.248,-39.693,-12.841)
O3': (-11.994,-43.536,-15.968)
N3: (-7.146,-39.800,-13.926)
OP1: (-15.367,-39.485,-13.571)
OP2: (-13.301,-38.269,-12.668)
C2: (-7.682,-40.189,-15.122)
C1': (-9.740,-40.743,-16.369)
C3': (-11.401,-42.280,-15.728)
O5': (-13.071,-40.045,-14.448)
O4': (-11.013,-40.105,-16.461)
C5': (-13.321,-40.512,-15.780)
P: (-14.011,-38.923,-13.796)
C4': (-12.071,-41.101,-16.413)
C2': (-9.997,-42.244,-16.308)
O2': (-9.927,-42.816,-17.602)
N1: (-9.073,-40.315,-15.129)
O4: (-7.206,-39.136,-11.770)
O2: (-6.981,-40.407,-16.094)
C6: (-9.805,-40.063,-13.990)
C5: (-9.248,-39.693,-12.841)
O3': (-11.994,-43.536,-15.968)
Image (generated by PyMOL):