ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A1486:A1487

Extra

PDB:
ATOM 1 O3' A A1485 -8.641 -49.893 1.423 1.00174.51 O
ATOM 2 P A A1486 -8.415 -48.508 0.595 1.00160.93 P
ATOM 3 OP1 A A1486 -9.197 -48.624 -0.661 1.00172.36 O
ATOM 4 OP2 A A1486 -6.959 -48.295 0.506 1.00149.23 O
ATOM 5 O5' A A1486 -9.058 -47.382 1.527 1.00 55.80 O
ATOM 6 C5' A A1486 -8.618 -46.033 1.480 1.00 40.93 C
ATOM 7 C4' A A1486 -8.036 -45.583 2.823 1.00 74.81 C
ATOM 8 O4' A A1486 -6.899 -46.421 3.183 1.00 92.23 O
ATOM 9 C3' A A1486 -7.527 -44.135 2.888 1.00 73.98 C
ATOM 10 O3' A A1486 -8.507 -43.248 3.414 1.00 71.97 O
ATOM 11 C2' A A1486 -6.218 -44.184 3.715 1.00 65.68 C
ATOM 12 O2' A A1486 -6.433 -43.835 5.070 1.00 54.07 O
ATOM 13 C1' A A1486 -5.801 -45.649 3.647 1.00 74.78 C
ATOM 14 N9 A A1486 -4.659 -45.874 2.733 1.00 86.32 N
ATOM 15 C8 A A1486 -4.674 -45.779 1.363 1.00 90.09 C
ATOM 16 N7 A A1486 -3.536 -46.092 0.791 1.00 92.23 N
ATOM 17 C5 A A1486 -2.713 -46.434 1.852 1.00 95.32 C
ATOM 18 C6 A A1486 -1.376 -46.853 1.909 1.00 96.56 C
ATOM 19 N6 A A1486 -0.605 -47.006 0.838 1.00 97.68 N
ATOM 20 N1 A A1486 -0.845 -47.113 3.116 1.00 95.95 N
ATOM 21 C2 A A1486 -1.619 -46.957 4.189 1.00 94.18 C
ATOM 22 N3 A A1486 -2.890 -46.567 4.262 1.00 96.09 N
ATOM 23 C4 A A1486 -3.392 -46.315 3.048 1.00 92.10 C
ATOM 24 P C A1487 -8.386 -41.660 3.199 1.00 74.75 P
ATOM 25 OP1 C A1487 -9.215 -41.007 4.243 1.00 91.95 O
ATOM 26 OP2 C A1487 -8.681 -41.389 1.777 1.00 78.41 O
ATOM 27 O5' C A1487 -6.872 -41.382 3.487 1.00 65.35 O
TER

ATOM 1 O3' A B1486 -8.507 -43.248 3.414 1.00 71.97 O
ATOM 2 P C B1487 -8.386 -41.660 3.199 1.00 74.75 P
ATOM 3 OP1 C B1487 -9.215 -41.007 4.243 1.00 91.95 O
ATOM 4 OP2 C B1487 -8.681 -41.389 1.777 1.00 78.41 O
ATOM 5 O5' C B1487 -6.872 -41.382 3.487 1.00 65.35 O
ATOM 6 C5' C B1487 -6.232 -40.282 2.884 1.00 64.18 C
ATOM 7 C4' C B1487 -4.848 -40.637 2.420 1.00 64.47 C
ATOM 8 O4' C B1487 -4.787 -42.027 2.036 1.00 68.44 O
ATOM 9 C3' C B1487 -4.367 -39.889 1.206 1.00 50.72 C
ATOM 10 O3' C B1487 -3.855 -38.630 1.561 1.00 64.81 O
ATOM 11 C2' C B1487 -3.316 -40.819 0.621 1.00 55.27 C
ATOM 12 O2' C B1487 -2.072 -40.630 1.269 1.00 60.50 O
ATOM 13 C1' C B1487 -3.854 -42.195 1.002 1.00 59.71 C
ATOM 14 N1 C B1487 -4.523 -42.859 -0.111 1.00 67.49 N
ATOM 15 C2 C B1487 -3.773 -43.412 -1.146 1.00 74.86 C
ATOM 16 O2 C B1487 -2.535 -43.315 -1.130 1.00 69.54 O
ATOM 17 N3 C B1487 -4.426 -44.036 -2.151 1.00 75.87 N
ATOM 18 C4 C B1487 -5.753 -44.114 -2.126 1.00 64.63 C
ATOM 19 N4 C B1487 -6.357 -44.729 -3.137 1.00 70.65 N
ATOM 20 C5 C B1487 -6.526 -43.570 -1.072 1.00 64.94 C
ATOM 21 C6 C B1487 -5.873 -42.959 -0.089 1.00 63.96 C
ATOM 22 P C B1488 -3.825 -37.432 0.506 1.00 73.62 P
ATOM 23 OP1 C B1488 -5.054 -37.559 -0.329 1.00 46.26 O
ATOM 24 OP2 C B1488 -2.484 -37.472 -0.159 1.00 67.15 O
ATOM 25 O5' C B1488 -3.928 -36.146 1.452 1.00 58.83 O
TER

Atoms:
OP1: (-9.197,-48.624,-0.661)
OP2: (-6.959,-48.295,0.506)
C3': (-7.527,-44.135,2.888)
C1': (-5.801,-45.649,3.647)
C5': (-8.618,-46.033,1.480)
O4': (-6.899,-46.421,3.183)
C8: (-4.674,-45.779,1.363)
O2': (-6.433,-43.835,5.070)
C6: (-1.376,-46.853,1.909)
C5: (-2.713,-46.434,1.852)
C4: (-3.392,-46.315,3.048)
P: (-8.415,-48.508,0.595)
C4': (-8.036,-45.583,2.823)
C2': (-6.218,-44.184,3.715)
C2: (-1.619,-46.957,4.189)
N1: (-0.845,-47.113,3.116)
N3: (-2.890,-46.567,4.262)
N6: (-0.605,-47.006,0.838)
N7: (-3.536,-46.092,0.791)
N9: (-4.659,-45.874,2.733)
O5': (-9.058,-47.382,1.527)
O3': (-8.507,-43.248,3.414)
C2: (-3.773,-43.412,-1.146)
OP1: (-9.215,-41.007,4.243)
OP2: (-8.681,-41.389,1.777)
C4: (-5.753,-44.114,-2.126)
O5': (-6.872,-41.382,3.487)
C3': (-4.367,-39.889,1.206)
C1': (-3.854,-42.195,1.002)
O4': (-4.787,-42.027,2.036)
C5': (-6.232,-40.282,2.884)
P: (-8.386,-41.660,3.199)
O2: (-2.535,-43.315,-1.130)
C4': (-4.848,-40.637,2.420)
C2': (-3.316,-40.819,0.621)
O2': (-2.072,-40.630,1.269)
N1: (-4.523,-42.859,-0.111)
N3: (-4.426,-44.036,-2.151)
N4: (-6.357,-44.729,-3.137)
C6: (-5.873,-42.959,-0.089)
C5: (-6.526,-43.570,-1.072)
O3': (-3.855,-38.630,1.561)
Image (generated by PyMOL):
PyMOL image
show in jmol