Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11379:11381
Extra
PDB:
ATOM 1 O3' G A1378 56.364 1.648 69.846 1.00 32.49 O
ATOM 2 P A A1379 55.530 2.263 71.018 1.00 33.80 P
ATOM 3 OP1 A A1379 54.386 2.970 70.415 1.00 33.76 O
ATOM 4 OP2 A A1379 56.418 3.030 71.870 1.00 33.95 O
ATOM 5 O5' A A1379 55.021 0.945 71.729 1.00 33.72 O
ATOM 6 C5' A A1379 54.116 0.091 71.044 1.00 33.59 C
ATOM 7 C4' A A1379 53.929 -1.235 71.734 1.00 33.55 C
ATOM 8 O4' A A1379 55.189 -1.942 71.858 1.00 33.60 O
ATOM 9 C3' A A1379 53.340 -1.205 73.136 1.00 33.60 C
ATOM 10 O3' A A1379 51.933 -1.175 73.064 1.00 33.53 O
ATOM 11 C2' A A1379 53.843 -2.520 73.732 1.00 33.61 C
ATOM 12 O2' A A1379 52.964 -3.573 73.377 1.00 33.50 O
ATOM 13 C1' A A1379 55.160 -2.768 72.997 1.00 33.63 C
ATOM 14 N9 A A1379 56.355 -2.509 73.829 1.00 33.77 N
ATOM 15 C8 A A1379 57.263 -1.481 73.787 1.00 33.87 C
ATOM 16 N7 A A1379 58.235 -1.619 74.645 1.00 33.99 N
ATOM 17 C5 A A1379 57.972 -2.803 75.280 1.00 33.97 C
ATOM 18 C6 A A1379 58.650 -3.505 76.279 1.00 34.08 C
ATOM 19 N6 A A1379 59.752 -3.103 76.881 1.00 34.23 N
ATOM 20 N1 A A1379 58.110 -4.664 76.701 1.00 34.04 N
ATOM 21 C2 A A1379 56.953 -5.071 76.121 1.00 33.90 C
ATOM 22 N3 A A1379 56.236 -4.541 75.144 1.00 33.79 N
ATOM 23 C4 A A1379 56.811 -3.369 74.788 1.00 33.83 C
ATOM 24 P U A1380 51.019 -0.326 74.046 1.00 38.41 P
ATOM 25 OP1 U A1380 51.329 -0.722 75.405 1.00 38.50 O
ATOM 26 OP2 U A1380 49.659 -0.504 73.575 1.00 38.32 O
ATOM 27 O5' U A1380 51.499 1.153 73.789 1.00 38.50 O
TER
ATOM 1 O3' U B1380 51.812 4.495 74.160 1.00 38.78 O
ATOM 2 P C B1381 52.584 4.891 75.489 1.00 32.56 P
ATOM 3 OP1 C B1381 51.644 5.639 76.311 1.00 32.64 O
ATOM 4 OP2 C B1381 53.866 5.558 75.046 1.00 32.64 O
ATOM 5 O5' C B1381 52.893 3.481 76.176 1.00 32.51 O
ATOM 6 C5' C B1381 53.939 2.661 75.698 1.00 32.47 C
ATOM 7 C4' C B1381 54.266 1.548 76.645 1.00 32.49 C
ATOM 8 O4' C B1381 55.121 0.612 75.977 1.00 32.43 O
ATOM 9 C3' C B1381 55.021 1.935 77.907 1.00 32.67 C
ATOM 10 O3' C B1381 54.148 2.305 78.951 1.00 32.74 O
ATOM 11 C2' C B1381 55.852 0.690 78.220 1.00 32.67 C
ATOM 12 O2' C B1381 55.085 -0.346 78.920 1.00 32.63 O
ATOM 13 C1' C B1381 56.172 0.213 76.811 1.00 32.54 C
ATOM 14 N1 C B1381 57.400 0.806 76.269 1.00 32.61 N
ATOM 15 C2 C B1381 58.636 0.615 76.824 1.00 32.74 C
ATOM 16 O2 C B1381 58.691 -0.033 77.843 1.00 32.80 O
ATOM 17 N3 C B1381 59.739 1.151 76.288 1.00 32.82 N
ATOM 18 C4 C B1381 59.629 1.848 75.174 1.00 32.76 C
ATOM 19 N4 C B1381 60.735 2.361 74.646 1.00 32.84 N
ATOM 20 C5 C B1381 58.372 2.048 74.529 1.00 32.62 C
ATOM 21 C6 C B1381 57.307 1.505 75.111 1.00 32.56 C
ATOM 22 P U B1382 54.419 3.622 79.789 1.00 37.66 P
ATOM 23 OP1 U B1382 53.186 3.888 80.585 1.00 37.69 O
ATOM 24 OP2 U B1382 54.928 4.661 78.821 1.00 37.67 O
ATOM 25 O5' U B1382 55.586 3.178 80.736 1.00 37.80 O
TER
ATOM 2 P A A1379 55.530 2.263 71.018 1.00 33.80 P
ATOM 3 OP1 A A1379 54.386 2.970 70.415 1.00 33.76 O
ATOM 4 OP2 A A1379 56.418 3.030 71.870 1.00 33.95 O
ATOM 5 O5' A A1379 55.021 0.945 71.729 1.00 33.72 O
ATOM 6 C5' A A1379 54.116 0.091 71.044 1.00 33.59 C
ATOM 7 C4' A A1379 53.929 -1.235 71.734 1.00 33.55 C
ATOM 8 O4' A A1379 55.189 -1.942 71.858 1.00 33.60 O
ATOM 9 C3' A A1379 53.340 -1.205 73.136 1.00 33.60 C
ATOM 10 O3' A A1379 51.933 -1.175 73.064 1.00 33.53 O
ATOM 11 C2' A A1379 53.843 -2.520 73.732 1.00 33.61 C
ATOM 12 O2' A A1379 52.964 -3.573 73.377 1.00 33.50 O
ATOM 13 C1' A A1379 55.160 -2.768 72.997 1.00 33.63 C
ATOM 14 N9 A A1379 56.355 -2.509 73.829 1.00 33.77 N
ATOM 15 C8 A A1379 57.263 -1.481 73.787 1.00 33.87 C
ATOM 16 N7 A A1379 58.235 -1.619 74.645 1.00 33.99 N
ATOM 17 C5 A A1379 57.972 -2.803 75.280 1.00 33.97 C
ATOM 18 C6 A A1379 58.650 -3.505 76.279 1.00 34.08 C
ATOM 19 N6 A A1379 59.752 -3.103 76.881 1.00 34.23 N
ATOM 20 N1 A A1379 58.110 -4.664 76.701 1.00 34.04 N
ATOM 21 C2 A A1379 56.953 -5.071 76.121 1.00 33.90 C
ATOM 22 N3 A A1379 56.236 -4.541 75.144 1.00 33.79 N
ATOM 23 C4 A A1379 56.811 -3.369 74.788 1.00 33.83 C
ATOM 24 P U A1380 51.019 -0.326 74.046 1.00 38.41 P
ATOM 25 OP1 U A1380 51.329 -0.722 75.405 1.00 38.50 O
ATOM 26 OP2 U A1380 49.659 -0.504 73.575 1.00 38.32 O
ATOM 27 O5' U A1380 51.499 1.153 73.789 1.00 38.50 O
TER
ATOM 1 O3' U B1380 51.812 4.495 74.160 1.00 38.78 O
ATOM 2 P C B1381 52.584 4.891 75.489 1.00 32.56 P
ATOM 3 OP1 C B1381 51.644 5.639 76.311 1.00 32.64 O
ATOM 4 OP2 C B1381 53.866 5.558 75.046 1.00 32.64 O
ATOM 5 O5' C B1381 52.893 3.481 76.176 1.00 32.51 O
ATOM 6 C5' C B1381 53.939 2.661 75.698 1.00 32.47 C
ATOM 7 C4' C B1381 54.266 1.548 76.645 1.00 32.49 C
ATOM 8 O4' C B1381 55.121 0.612 75.977 1.00 32.43 O
ATOM 9 C3' C B1381 55.021 1.935 77.907 1.00 32.67 C
ATOM 10 O3' C B1381 54.148 2.305 78.951 1.00 32.74 O
ATOM 11 C2' C B1381 55.852 0.690 78.220 1.00 32.67 C
ATOM 12 O2' C B1381 55.085 -0.346 78.920 1.00 32.63 O
ATOM 13 C1' C B1381 56.172 0.213 76.811 1.00 32.54 C
ATOM 14 N1 C B1381 57.400 0.806 76.269 1.00 32.61 N
ATOM 15 C2 C B1381 58.636 0.615 76.824 1.00 32.74 C
ATOM 16 O2 C B1381 58.691 -0.033 77.843 1.00 32.80 O
ATOM 17 N3 C B1381 59.739 1.151 76.288 1.00 32.82 N
ATOM 18 C4 C B1381 59.629 1.848 75.174 1.00 32.76 C
ATOM 19 N4 C B1381 60.735 2.361 74.646 1.00 32.84 N
ATOM 20 C5 C B1381 58.372 2.048 74.529 1.00 32.62 C
ATOM 21 C6 C B1381 57.307 1.505 75.111 1.00 32.56 C
ATOM 22 P U B1382 54.419 3.622 79.789 1.00 37.66 P
ATOM 23 OP1 U B1382 53.186 3.888 80.585 1.00 37.69 O
ATOM 24 OP2 U B1382 54.928 4.661 78.821 1.00 37.67 O
ATOM 25 O5' U B1382 55.586 3.178 80.736 1.00 37.80 O
TER
Atoms:
OP1: (54.386,2.970,70.415)
OP2: (56.418,3.030,71.870)
C3': (53.340,-1.205,73.136)
C1': (55.160,-2.768,72.997)
C5': (54.116,0.091,71.044)
O4': (55.189,-1.942,71.858)
C8: (57.263,-1.481,73.787)
O2': (52.964,-3.573,73.377)
C6: (58.650,-3.505,76.279)
C5: (57.972,-2.803,75.280)
C4: (56.811,-3.369,74.788)
P: (55.530,2.263,71.018)
C4': (53.929,-1.235,71.734)
C2': (53.843,-2.520,73.732)
C2: (56.953,-5.071,76.121)
N1: (58.110,-4.664,76.701)
N3: (56.236,-4.541,75.144)
N6: (59.752,-3.103,76.881)
N7: (58.235,-1.619,74.645)
N9: (56.355,-2.509,73.829)
O5': (55.021,0.945,71.729)
O3': (51.933,-1.175,73.064)
OP2: (56.418,3.030,71.870)
C3': (53.340,-1.205,73.136)
C1': (55.160,-2.768,72.997)
C5': (54.116,0.091,71.044)
O4': (55.189,-1.942,71.858)
C8: (57.263,-1.481,73.787)
O2': (52.964,-3.573,73.377)
C6: (58.650,-3.505,76.279)
C5: (57.972,-2.803,75.280)
C4: (56.811,-3.369,74.788)
P: (55.530,2.263,71.018)
C4': (53.929,-1.235,71.734)
C2': (53.843,-2.520,73.732)
C2: (56.953,-5.071,76.121)
N1: (58.110,-4.664,76.701)
N3: (56.236,-4.541,75.144)
N6: (59.752,-3.103,76.881)
N7: (58.235,-1.619,74.645)
N9: (56.355,-2.509,73.829)
O5': (55.021,0.945,71.729)
O3': (51.933,-1.175,73.064)
C2: (58.636,0.615,76.824)
OP1: (51.644,5.639,76.311)
OP2: (53.866,5.558,75.046)
C4: (59.629,1.848,75.174)
O5': (52.893,3.481,76.176)
C3': (55.021,1.935,77.907)
C1': (56.172,0.213,76.811)
O4': (55.121,0.612,75.977)
C5': (53.939,2.661,75.698)
P: (52.584,4.891,75.489)
O2: (58.691,-0.033,77.843)
C4': (54.266,1.548,76.645)
C2': (55.852,0.690,78.220)
O2': (55.085,-0.346,78.920)
N1: (57.400,0.806,76.269)
N3: (59.739,1.151,76.288)
N4: (60.735,2.361,74.646)
C6: (57.307,1.505,75.111)
C5: (58.372,2.048,74.529)
O3': (54.148,2.305,78.951)
OP1: (51.644,5.639,76.311)
OP2: (53.866,5.558,75.046)
C4: (59.629,1.848,75.174)
O5': (52.893,3.481,76.176)
C3': (55.021,1.935,77.907)
C1': (56.172,0.213,76.811)
O4': (55.121,0.612,75.977)
C5': (53.939,2.661,75.698)
P: (52.584,4.891,75.489)
O2: (58.691,-0.033,77.843)
C4': (54.266,1.548,76.645)
C2': (55.852,0.690,78.220)
O2': (55.085,-0.346,78.920)
N1: (57.400,0.806,76.269)
N3: (59.739,1.151,76.288)
N4: (60.735,2.361,74.646)
C6: (57.307,1.505,75.111)
C5: (58.372,2.048,74.529)
O3': (54.148,2.305,78.951)
Image (generated by PyMOL):