Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3G9C:P111:P112
Extra
PDB:
ATOM 1 O3' G A 110 -11.510 -11.900 14.394 1.00 49.32 O
ATOM 2 P A A 111 -12.303 -13.286 14.549 1.00 49.33 P
ATOM 3 OP1 A A 111 -13.420 -13.277 13.577 1.00 49.34 O
ATOM 4 OP2 A A 111 -12.603 -13.512 15.983 1.00 48.71 O
ATOM 5 O5' A A 111 -11.217 -14.353 14.050 1.00 48.77 O
ATOM 6 C5' A A 111 -10.879 -14.423 12.663 1.00 48.11 C
ATOM 7 C4' A A 111 -9.591 -15.188 12.420 1.00 47.59 C
ATOM 8 O4' A A 111 -8.495 -14.595 13.162 1.00 46.86 O
ATOM 9 C3' A A 111 -9.597 -16.639 12.877 1.00 47.67 C
ATOM 10 O3' A A 111 -10.250 -17.456 11.911 1.00 48.60 O
ATOM 11 C2' A A 111 -8.101 -16.927 12.993 1.00 46.92 C
ATOM 12 O2' A A 111 -7.498 -17.228 11.746 1.00 47.03 O
ATOM 13 C1' A A 111 -7.558 -15.599 13.518 1.00 45.62 C
ATOM 14 N9 A A 111 -7.337 -15.521 14.962 1.00 43.60 N
ATOM 15 C8 A A 111 -8.278 -15.333 15.933 1.00 43.15 C
ATOM 16 N7 A A 111 -7.793 -15.291 17.152 1.00 42.54 N
ATOM 17 C5 A A 111 -6.432 -15.452 16.974 1.00 42.03 C
ATOM 18 C6 A A 111 -5.348 -15.500 17.880 1.00 41.50 C
ATOM 19 N6 A A 111 -5.474 -15.383 19.205 1.00 41.35 N
ATOM 20 N1 A A 111 -4.111 -15.677 17.372 1.00 41.32 N
ATOM 21 C2 A A 111 -3.971 -15.795 16.046 1.00 41.83 C
ATOM 22 N3 A A 111 -4.910 -15.771 15.098 1.00 42.45 N
ATOM 23 C4 A A 111 -6.134 -15.594 15.629 1.00 42.73 C
ATOM 24 P C A 112 -11.255 -18.615 12.377 1.00 50.19 P
ATOM 25 OP1 C A 112 -11.804 -19.242 11.154 1.00 49.97 O
ATOM 26 OP2 C A 112 -12.187 -18.079 13.400 1.00 50.06 O
ATOM 27 O5' C A 112 -10.263 -19.663 13.069 1.00 49.97 O
TER
ATOM 1 O3' A B 111 -10.250 -17.456 11.911 1.00 48.60 O
ATOM 2 P C B 112 -11.255 -18.615 12.377 1.00 50.19 P
ATOM 3 OP1 C B 112 -11.804 -19.242 11.154 1.00 49.97 O
ATOM 4 OP2 C B 112 -12.187 -18.079 13.400 1.00 50.06 O
ATOM 5 O5' C B 112 -10.263 -19.663 13.069 1.00 49.97 O
ATOM 6 C5' C B 112 -10.659 -20.344 14.246 1.00 50.04 C
ATOM 7 C4' C B 112 -9.689 -20.059 15.376 1.00 50.28 C
ATOM 8 O4' C B 112 -9.628 -18.636 15.670 1.00 49.81 O
ATOM 9 C3' C B 112 -10.100 -20.683 16.695 1.00 50.55 C
ATOM 10 O3' C B 112 -9.717 -22.052 16.737 1.00 51.28 O
ATOM 11 C2' C B 112 -9.341 -19.811 17.689 1.00 50.17 C
ATOM 12 O2' C B 112 -7.963 -20.123 17.766 1.00 50.75 O
ATOM 13 C1' C B 112 -9.545 -18.427 17.073 1.00 49.37 C
ATOM 14 N1 C B 112 -10.787 -17.719 17.571 1.00 48.51 N
ATOM 15 C2 C B 112 -10.905 -17.302 18.914 1.00 48.26 C
ATOM 16 O2 C B 112 -9.987 -17.500 19.723 1.00 48.19 O
ATOM 17 N3 C B 112 -12.047 -16.678 19.309 1.00 47.97 N
ATOM 18 C4 C B 112 -13.039 -16.463 18.439 1.00 48.09 C
ATOM 19 N4 C B 112 -14.139 -15.844 18.875 1.00 47.84 N
ATOM 20 C5 C B 112 -12.945 -16.872 17.076 1.00 48.20 C
ATOM 21 C6 C B 112 -11.817 -17.486 16.698 1.00 48.37 C
ATOM 22 P U B 113 -10.692 -23.110 17.435 1.00 51.97 P
ATOM 23 OP1 U B 113 -10.195 -24.471 17.133 1.00 52.30 O
ATOM 24 OP2 U B 113 -12.081 -22.754 17.071 1.00 52.17 O
ATOM 25 O5' U B 113 -10.473 -22.820 18.995 1.00 52.48 O
TER
ATOM 2 P A A 111 -12.303 -13.286 14.549 1.00 49.33 P
ATOM 3 OP1 A A 111 -13.420 -13.277 13.577 1.00 49.34 O
ATOM 4 OP2 A A 111 -12.603 -13.512 15.983 1.00 48.71 O
ATOM 5 O5' A A 111 -11.217 -14.353 14.050 1.00 48.77 O
ATOM 6 C5' A A 111 -10.879 -14.423 12.663 1.00 48.11 C
ATOM 7 C4' A A 111 -9.591 -15.188 12.420 1.00 47.59 C
ATOM 8 O4' A A 111 -8.495 -14.595 13.162 1.00 46.86 O
ATOM 9 C3' A A 111 -9.597 -16.639 12.877 1.00 47.67 C
ATOM 10 O3' A A 111 -10.250 -17.456 11.911 1.00 48.60 O
ATOM 11 C2' A A 111 -8.101 -16.927 12.993 1.00 46.92 C
ATOM 12 O2' A A 111 -7.498 -17.228 11.746 1.00 47.03 O
ATOM 13 C1' A A 111 -7.558 -15.599 13.518 1.00 45.62 C
ATOM 14 N9 A A 111 -7.337 -15.521 14.962 1.00 43.60 N
ATOM 15 C8 A A 111 -8.278 -15.333 15.933 1.00 43.15 C
ATOM 16 N7 A A 111 -7.793 -15.291 17.152 1.00 42.54 N
ATOM 17 C5 A A 111 -6.432 -15.452 16.974 1.00 42.03 C
ATOM 18 C6 A A 111 -5.348 -15.500 17.880 1.00 41.50 C
ATOM 19 N6 A A 111 -5.474 -15.383 19.205 1.00 41.35 N
ATOM 20 N1 A A 111 -4.111 -15.677 17.372 1.00 41.32 N
ATOM 21 C2 A A 111 -3.971 -15.795 16.046 1.00 41.83 C
ATOM 22 N3 A A 111 -4.910 -15.771 15.098 1.00 42.45 N
ATOM 23 C4 A A 111 -6.134 -15.594 15.629 1.00 42.73 C
ATOM 24 P C A 112 -11.255 -18.615 12.377 1.00 50.19 P
ATOM 25 OP1 C A 112 -11.804 -19.242 11.154 1.00 49.97 O
ATOM 26 OP2 C A 112 -12.187 -18.079 13.400 1.00 50.06 O
ATOM 27 O5' C A 112 -10.263 -19.663 13.069 1.00 49.97 O
TER
ATOM 1 O3' A B 111 -10.250 -17.456 11.911 1.00 48.60 O
ATOM 2 P C B 112 -11.255 -18.615 12.377 1.00 50.19 P
ATOM 3 OP1 C B 112 -11.804 -19.242 11.154 1.00 49.97 O
ATOM 4 OP2 C B 112 -12.187 -18.079 13.400 1.00 50.06 O
ATOM 5 O5' C B 112 -10.263 -19.663 13.069 1.00 49.97 O
ATOM 6 C5' C B 112 -10.659 -20.344 14.246 1.00 50.04 C
ATOM 7 C4' C B 112 -9.689 -20.059 15.376 1.00 50.28 C
ATOM 8 O4' C B 112 -9.628 -18.636 15.670 1.00 49.81 O
ATOM 9 C3' C B 112 -10.100 -20.683 16.695 1.00 50.55 C
ATOM 10 O3' C B 112 -9.717 -22.052 16.737 1.00 51.28 O
ATOM 11 C2' C B 112 -9.341 -19.811 17.689 1.00 50.17 C
ATOM 12 O2' C B 112 -7.963 -20.123 17.766 1.00 50.75 O
ATOM 13 C1' C B 112 -9.545 -18.427 17.073 1.00 49.37 C
ATOM 14 N1 C B 112 -10.787 -17.719 17.571 1.00 48.51 N
ATOM 15 C2 C B 112 -10.905 -17.302 18.914 1.00 48.26 C
ATOM 16 O2 C B 112 -9.987 -17.500 19.723 1.00 48.19 O
ATOM 17 N3 C B 112 -12.047 -16.678 19.309 1.00 47.97 N
ATOM 18 C4 C B 112 -13.039 -16.463 18.439 1.00 48.09 C
ATOM 19 N4 C B 112 -14.139 -15.844 18.875 1.00 47.84 N
ATOM 20 C5 C B 112 -12.945 -16.872 17.076 1.00 48.20 C
ATOM 21 C6 C B 112 -11.817 -17.486 16.698 1.00 48.37 C
ATOM 22 P U B 113 -10.692 -23.110 17.435 1.00 51.97 P
ATOM 23 OP1 U B 113 -10.195 -24.471 17.133 1.00 52.30 O
ATOM 24 OP2 U B 113 -12.081 -22.754 17.071 1.00 52.17 O
ATOM 25 O5' U B 113 -10.473 -22.820 18.995 1.00 52.48 O
TER
Atoms:
OP1: (-13.420,-13.277,13.577)
OP2: (-12.603,-13.512,15.983)
C3': (-9.597,-16.639,12.877)
C1': (-7.558,-15.599,13.518)
C5': (-10.879,-14.423,12.663)
O4': (-8.495,-14.595,13.162)
C8: (-8.278,-15.333,15.933)
O2': (-7.498,-17.228,11.746)
C6: (-5.348,-15.500,17.880)
C5: (-6.432,-15.452,16.974)
C4: (-6.134,-15.594,15.629)
P: (-12.303,-13.286,14.549)
C4': (-9.591,-15.188,12.420)
C2': (-8.101,-16.927,12.993)
C2: (-3.971,-15.795,16.046)
N1: (-4.111,-15.677,17.372)
N3: (-4.910,-15.771,15.098)
N6: (-5.474,-15.383,19.205)
N7: (-7.793,-15.291,17.152)
N9: (-7.337,-15.521,14.962)
O5': (-11.217,-14.353,14.050)
O3': (-10.250,-17.456,11.911)
OP2: (-12.603,-13.512,15.983)
C3': (-9.597,-16.639,12.877)
C1': (-7.558,-15.599,13.518)
C5': (-10.879,-14.423,12.663)
O4': (-8.495,-14.595,13.162)
C8: (-8.278,-15.333,15.933)
O2': (-7.498,-17.228,11.746)
C6: (-5.348,-15.500,17.880)
C5: (-6.432,-15.452,16.974)
C4: (-6.134,-15.594,15.629)
P: (-12.303,-13.286,14.549)
C4': (-9.591,-15.188,12.420)
C2': (-8.101,-16.927,12.993)
C2: (-3.971,-15.795,16.046)
N1: (-4.111,-15.677,17.372)
N3: (-4.910,-15.771,15.098)
N6: (-5.474,-15.383,19.205)
N7: (-7.793,-15.291,17.152)
N9: (-7.337,-15.521,14.962)
O5': (-11.217,-14.353,14.050)
O3': (-10.250,-17.456,11.911)
C2: (-10.905,-17.302,18.914)
OP1: (-11.804,-19.242,11.154)
OP2: (-12.187,-18.079,13.400)
C4: (-13.039,-16.463,18.439)
O5': (-10.263,-19.663,13.069)
C3': (-10.100,-20.683,16.695)
C1': (-9.545,-18.427,17.073)
O4': (-9.628,-18.636,15.670)
C5': (-10.659,-20.344,14.246)
P: (-11.255,-18.615,12.377)
O2: (-9.987,-17.500,19.723)
C4': (-9.689,-20.059,15.376)
C2': (-9.341,-19.811,17.689)
O2': (-7.963,-20.123,17.766)
N1: (-10.787,-17.719,17.571)
N3: (-12.047,-16.678,19.309)
N4: (-14.139,-15.844,18.875)
C6: (-11.817,-17.486,16.698)
C5: (-12.945,-16.872,17.076)
O3': (-9.717,-22.052,16.737)
OP1: (-11.804,-19.242,11.154)
OP2: (-12.187,-18.079,13.400)
C4: (-13.039,-16.463,18.439)
O5': (-10.263,-19.663,13.069)
C3': (-10.100,-20.683,16.695)
C1': (-9.545,-18.427,17.073)
O4': (-9.628,-18.636,15.670)
C5': (-10.659,-20.344,14.246)
P: (-11.255,-18.615,12.377)
O2: (-9.987,-17.500,19.723)
C4': (-9.689,-20.059,15.376)
C2': (-9.341,-19.811,17.689)
O2': (-7.963,-20.123,17.766)
N1: (-10.787,-17.719,17.571)
N3: (-12.047,-16.678,19.309)
N4: (-14.139,-15.844,18.875)
C6: (-11.817,-17.486,16.698)
C5: (-12.945,-16.872,17.076)
O3': (-9.717,-22.052,16.737)
Image (generated by PyMOL):