ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A1236:A1237

Extra

PDB:
ATOM 1 O3' A A1235 173.736 36.271 -5.597 1.00 96.21 O
ATOM 2 P A A1236 173.830 37.173 -4.261 1.00105.60 P
ATOM 3 OP1 A A1236 172.929 38.344 -4.421 1.00 94.30 O
ATOM 4 OP2 A A1236 175.268 37.402 -3.976 1.00111.03 O
ATOM 5 O5' A A1236 173.259 36.240 -3.097 1.00107.36 O
ATOM 6 C5' A A1236 171.859 36.011 -2.951 1.00103.84 C
ATOM 7 C4' A A1236 171.605 34.965 -1.889 1.00 96.21 C
ATOM 8 O4' A A1236 172.321 33.763 -2.259 1.00 84.78 O
ATOM 9 C3' A A1236 172.063 35.284 -0.466 1.00 96.92 C
ATOM 10 O3' A A1236 171.074 36.021 0.278 1.00102.52 O
ATOM 11 C2' A A1236 172.297 33.890 0.128 1.00 93.21 C
ATOM 12 O2' A A1236 171.175 33.254 0.706 1.00 88.86 O
ATOM 13 C1' A A1236 172.746 33.091 -1.095 1.00 92.17 C
ATOM 14 N9 A A1236 174.195 32.941 -1.145 1.00103.94 N
ATOM 15 C8 A A1236 175.158 33.911 -1.319 1.00107.03 C
ATOM 16 N7 A A1236 176.386 33.446 -1.297 1.00108.49 N
ATOM 17 C5 A A1236 176.221 32.081 -1.104 1.00104.15 C
ATOM 18 C6 A A1236 177.139 31.020 -0.997 1.00103.53 C
ATOM 19 N6 A A1236 178.461 31.172 -1.053 1.00108.38 N
ATOM 20 N1 A A1236 176.643 29.777 -0.825 1.00 98.00 N
ATOM 21 C2 A A1236 175.314 29.620 -0.752 1.00 98.68 C
ATOM 22 N3 A A1236 174.351 30.533 -0.827 1.00 95.18 N
ATOM 23 C4 A A1236 174.876 31.757 -1.010 1.00 99.73 C
ATOM 24 P C A1237 171.311 37.582 0.652 1.00103.70 P
ATOM 25 OP1 C A1237 170.080 38.095 1.297 1.00 98.56 O
ATOM 26 OP2 C A1237 171.851 38.276 -0.555 1.00 95.17 O
ATOM 27 O5' C A1237 172.441 37.557 1.778 1.00101.50 O
TER

ATOM 1 O3' A B1236 171.074 36.021 0.278 1.00102.52 O
ATOM 2 P C B1237 171.311 37.582 0.652 1.00103.70 P
ATOM 3 OP1 C B1237 170.080 38.095 1.297 1.00 98.56 O
ATOM 4 OP2 C B1237 171.851 38.276 -0.555 1.00 95.17 O
ATOM 5 O5' C B1237 172.441 37.557 1.778 1.00101.50 O
ATOM 6 C5' C B1237 172.420 36.571 2.805 1.00101.75 C
ATOM 7 C4' C B1237 173.795 35.981 2.991 1.00102.97 C
ATOM 8 O4' C B1237 174.389 35.780 1.685 1.00104.61 O
ATOM 9 C3' C B1237 174.821 36.811 3.745 1.00104.26 C
ATOM 10 O3' C B1237 174.695 36.585 5.146 1.00108.09 O
ATOM 11 C2' C B1237 176.144 36.267 3.212 1.00102.96 C
ATOM 12 O2' C B1237 176.570 35.064 3.820 1.00101.01 O
ATOM 13 C1' C B1237 175.789 35.935 1.769 1.00106.01 C
ATOM 14 N1 C B1237 176.217 36.972 0.824 1.00109.45 N
ATOM 15 C2 C B1237 177.334 36.719 0.012 1.00115.88 C
ATOM 16 O2 C B1237 177.921 35.621 0.104 1.00117.47 O
ATOM 17 N3 C B1237 177.749 37.674 -0.851 1.00119.24 N
ATOM 18 C4 C B1237 177.094 38.835 -0.928 1.00121.04 C
ATOM 19 N4 C B1237 177.544 39.750 -1.799 1.00121.22 N
ATOM 20 C5 C B1237 175.950 39.113 -0.119 1.00116.55 C
ATOM 21 C6 C B1237 175.551 38.163 0.735 1.00108.84 C
ATOM 22 P G B1238 175.402 37.581 6.190 1.00107.53 P
ATOM 23 OP1 G B1238 175.245 37.023 7.559 1.00100.20 O
ATOM 24 OP2 G B1238 174.885 38.934 5.886 1.00105.06 O
ATOM 25 O5' G B1238 176.947 37.527 5.802 1.00104.88 O
TER

Atoms:
OP1: (172.929,38.344,-4.421)
OP2: (175.268,37.402,-3.976)
C3': (172.063,35.284,-0.466)
C1': (172.746,33.091,-1.095)
C5': (171.859,36.011,-2.951)
O4': (172.321,33.763,-2.259)
C8: (175.158,33.911,-1.319)
O2': (171.175,33.254,0.706)
C6: (177.139,31.020,-0.997)
C5: (176.221,32.081,-1.104)
C4: (174.876,31.757,-1.010)
P: (173.830,37.173,-4.261)
C4': (171.605,34.965,-1.889)
C2': (172.297,33.890,0.128)
C2: (175.314,29.620,-0.752)
N1: (176.643,29.777,-0.825)
N3: (174.351,30.533,-0.827)
N6: (178.461,31.172,-1.053)
N7: (176.386,33.446,-1.297)
N9: (174.195,32.941,-1.145)
O5': (173.259,36.240,-3.097)
O3': (171.074,36.021,0.278)
C2: (177.334,36.719,0.012)
OP1: (170.080,38.095,1.297)
OP2: (171.851,38.276,-0.555)
C4: (177.094,38.835,-0.928)
O5': (172.441,37.557,1.778)
C3': (174.821,36.811,3.745)
C1': (175.789,35.935,1.769)
O4': (174.389,35.780,1.685)
C5': (172.420,36.571,2.805)
P: (171.311,37.582,0.652)
O2: (177.921,35.621,0.104)
C4': (173.795,35.981,2.991)
C2': (176.144,36.267,3.212)
O2': (176.570,35.064,3.820)
N1: (176.217,36.972,0.824)
N3: (177.749,37.674,-0.851)
N4: (177.544,39.750,-1.799)
C6: (175.551,38.163,0.735)
C5: (175.950,39.113,-0.119)
O3': (174.695,36.585,5.146)
Image (generated by PyMOL):
PyMOL image
show in jmol