Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12031:12032
Extra
PDB:
ATOM 1 O3' A A2030 26.543 -61.640 112.139 1.00 72.27 O
ATOM 2 P A A2031 25.542 -60.582 111.518 1.00 62.43 P
ATOM 3 OP1 A A2031 25.373 -59.507 112.533 1.00 62.38 O
ATOM 4 OP2 A A2031 24.346 -61.318 111.046 1.00 62.56 O
ATOM 5 O5' A A2031 26.372 -60.049 110.265 1.00 61.92 O
ATOM 6 C5' A A2031 27.373 -59.056 110.431 1.00 61.65 C
ATOM 7 C4' A A2031 28.334 -59.031 109.280 1.00 61.33 C
ATOM 8 O4' A A2031 28.687 -60.383 108.910 1.00 61.64 O
ATOM 9 C3' A A2031 27.818 -58.431 107.989 1.00 60.85 C
ATOM 10 O3' A A2031 27.833 -57.022 107.983 1.00 60.44 O
ATOM 11 C2' A A2031 28.764 -59.040 106.974 1.00 60.77 C
ATOM 12 O2' A A2031 30.048 -58.436 107.050 1.00 60.60 O
ATOM 13 C1' A A2031 28.884 -60.450 107.513 1.00 61.32 C
ATOM 14 N9 A A2031 27.865 -61.341 106.934 1.00 61.48 N
ATOM 15 C8 A A2031 26.608 -61.531 107.419 1.00 61.68 C
ATOM 16 N7 A A2031 25.943 -62.398 106.707 1.00 61.80 N
ATOM 17 C5 A A2031 26.810 -62.808 105.696 1.00 61.68 C
ATOM 18 C6 A A2031 26.680 -63.720 104.615 1.00 61.74 C
ATOM 19 N6 A A2031 25.577 -64.436 104.352 1.00 61.95 N
ATOM 20 N1 A A2031 27.746 -63.866 103.788 1.00 61.58 N
ATOM 21 C2 A A2031 28.856 -63.163 104.041 1.00 61.39 C
ATOM 22 N3 A A2031 29.074 -62.296 105.021 1.00 61.32 N
ATOM 23 C4 A A2031 28.007 -62.149 105.822 1.00 61.47 C
ATOM 24 P U A2032 26.468 -56.189 107.944 1.00 62.20 P
ATOM 25 OP1 U A2032 26.810 -54.805 107.532 1.00 61.71 O
ATOM 26 OP2 U A2032 25.800 -56.405 109.245 1.00 62.59 O
ATOM 27 O5' U A2032 25.640 -56.887 106.796 1.00 62.14 O
TER
ATOM 1 O3' A B2031 27.833 -57.022 107.983 1.00 60.44 O
ATOM 2 P U B2032 26.468 -56.189 107.944 1.00 62.20 P
ATOM 3 OP1 U B2032 26.810 -54.805 107.532 1.00 61.71 O
ATOM 4 OP2 U B2032 25.800 -56.405 109.245 1.00 62.59 O
ATOM 5 O5' U B2032 25.640 -56.887 106.796 1.00 62.14 O
ATOM 6 C5' U B2032 26.039 -56.805 105.444 1.00 61.80 C
ATOM 7 C4' U B2032 25.445 -57.938 104.660 1.00 61.97 C
ATOM 8 O4' U B2032 25.408 -59.133 105.496 1.00 62.50 O
ATOM 9 C3' U B2032 23.995 -57.766 104.213 1.00 61.87 C
ATOM 10 O3' U B2032 23.868 -56.962 103.040 1.00 61.40 O
ATOM 11 C2' U B2032 23.561 -59.211 104.018 1.00 62.27 C
ATOM 12 O2' U B2032 24.123 -59.731 102.830 1.00 62.16 O
ATOM 13 C1' U B2032 24.258 -59.893 105.191 1.00 62.70 C
ATOM 14 N1 U B2032 23.403 -59.964 106.406 1.00 63.03 N
ATOM 15 C2 U B2032 22.381 -60.908 106.504 1.00 63.38 C
ATOM 16 O2 U B2032 22.096 -61.700 105.630 1.00 63.44 O
ATOM 17 N3 U B2032 21.667 -60.891 107.666 1.00 63.67 N
ATOM 18 C4 U B2032 21.883 -60.067 108.745 1.00 63.67 C
ATOM 19 O4 U B2032 21.175 -60.178 109.742 1.00 63.98 O
ATOM 20 C5 U B2032 22.967 -59.147 108.603 1.00 63.32 C
ATOM 21 C6 U B2032 23.672 -59.129 107.464 1.00 63.01 C
ATOM 22 P U B2033 22.450 -56.312 102.614 1.00 66.20 P
ATOM 23 OP1 U B2033 22.651 -55.614 101.348 1.00 65.74 O
ATOM 24 OP2 U B2033 21.944 -55.544 103.772 1.00 66.25 O
ATOM 25 O5' U B2033 21.552 -57.576 102.353 1.00 66.55 O
TER
ATOM 2 P A A2031 25.542 -60.582 111.518 1.00 62.43 P
ATOM 3 OP1 A A2031 25.373 -59.507 112.533 1.00 62.38 O
ATOM 4 OP2 A A2031 24.346 -61.318 111.046 1.00 62.56 O
ATOM 5 O5' A A2031 26.372 -60.049 110.265 1.00 61.92 O
ATOM 6 C5' A A2031 27.373 -59.056 110.431 1.00 61.65 C
ATOM 7 C4' A A2031 28.334 -59.031 109.280 1.00 61.33 C
ATOM 8 O4' A A2031 28.687 -60.383 108.910 1.00 61.64 O
ATOM 9 C3' A A2031 27.818 -58.431 107.989 1.00 60.85 C
ATOM 10 O3' A A2031 27.833 -57.022 107.983 1.00 60.44 O
ATOM 11 C2' A A2031 28.764 -59.040 106.974 1.00 60.77 C
ATOM 12 O2' A A2031 30.048 -58.436 107.050 1.00 60.60 O
ATOM 13 C1' A A2031 28.884 -60.450 107.513 1.00 61.32 C
ATOM 14 N9 A A2031 27.865 -61.341 106.934 1.00 61.48 N
ATOM 15 C8 A A2031 26.608 -61.531 107.419 1.00 61.68 C
ATOM 16 N7 A A2031 25.943 -62.398 106.707 1.00 61.80 N
ATOM 17 C5 A A2031 26.810 -62.808 105.696 1.00 61.68 C
ATOM 18 C6 A A2031 26.680 -63.720 104.615 1.00 61.74 C
ATOM 19 N6 A A2031 25.577 -64.436 104.352 1.00 61.95 N
ATOM 20 N1 A A2031 27.746 -63.866 103.788 1.00 61.58 N
ATOM 21 C2 A A2031 28.856 -63.163 104.041 1.00 61.39 C
ATOM 22 N3 A A2031 29.074 -62.296 105.021 1.00 61.32 N
ATOM 23 C4 A A2031 28.007 -62.149 105.822 1.00 61.47 C
ATOM 24 P U A2032 26.468 -56.189 107.944 1.00 62.20 P
ATOM 25 OP1 U A2032 26.810 -54.805 107.532 1.00 61.71 O
ATOM 26 OP2 U A2032 25.800 -56.405 109.245 1.00 62.59 O
ATOM 27 O5' U A2032 25.640 -56.887 106.796 1.00 62.14 O
TER
ATOM 1 O3' A B2031 27.833 -57.022 107.983 1.00 60.44 O
ATOM 2 P U B2032 26.468 -56.189 107.944 1.00 62.20 P
ATOM 3 OP1 U B2032 26.810 -54.805 107.532 1.00 61.71 O
ATOM 4 OP2 U B2032 25.800 -56.405 109.245 1.00 62.59 O
ATOM 5 O5' U B2032 25.640 -56.887 106.796 1.00 62.14 O
ATOM 6 C5' U B2032 26.039 -56.805 105.444 1.00 61.80 C
ATOM 7 C4' U B2032 25.445 -57.938 104.660 1.00 61.97 C
ATOM 8 O4' U B2032 25.408 -59.133 105.496 1.00 62.50 O
ATOM 9 C3' U B2032 23.995 -57.766 104.213 1.00 61.87 C
ATOM 10 O3' U B2032 23.868 -56.962 103.040 1.00 61.40 O
ATOM 11 C2' U B2032 23.561 -59.211 104.018 1.00 62.27 C
ATOM 12 O2' U B2032 24.123 -59.731 102.830 1.00 62.16 O
ATOM 13 C1' U B2032 24.258 -59.893 105.191 1.00 62.70 C
ATOM 14 N1 U B2032 23.403 -59.964 106.406 1.00 63.03 N
ATOM 15 C2 U B2032 22.381 -60.908 106.504 1.00 63.38 C
ATOM 16 O2 U B2032 22.096 -61.700 105.630 1.00 63.44 O
ATOM 17 N3 U B2032 21.667 -60.891 107.666 1.00 63.67 N
ATOM 18 C4 U B2032 21.883 -60.067 108.745 1.00 63.67 C
ATOM 19 O4 U B2032 21.175 -60.178 109.742 1.00 63.98 O
ATOM 20 C5 U B2032 22.967 -59.147 108.603 1.00 63.32 C
ATOM 21 C6 U B2032 23.672 -59.129 107.464 1.00 63.01 C
ATOM 22 P U B2033 22.450 -56.312 102.614 1.00 66.20 P
ATOM 23 OP1 U B2033 22.651 -55.614 101.348 1.00 65.74 O
ATOM 24 OP2 U B2033 21.944 -55.544 103.772 1.00 66.25 O
ATOM 25 O5' U B2033 21.552 -57.576 102.353 1.00 66.55 O
TER
Atoms:
OP1: (25.373,-59.507,112.533)
OP2: (24.346,-61.318,111.046)
C3': (27.818,-58.431,107.989)
C1': (28.884,-60.450,107.513)
C5': (27.373,-59.056,110.431)
O4': (28.687,-60.383,108.910)
C8: (26.608,-61.531,107.419)
O2': (30.048,-58.436,107.050)
C6: (26.680,-63.720,104.615)
C5: (26.810,-62.808,105.696)
C4: (28.007,-62.149,105.822)
P: (25.542,-60.582,111.518)
C4': (28.334,-59.031,109.280)
C2': (28.764,-59.040,106.974)
C2: (28.856,-63.163,104.041)
N1: (27.746,-63.866,103.788)
N3: (29.074,-62.296,105.021)
N6: (25.577,-64.436,104.352)
N7: (25.943,-62.398,106.707)
N9: (27.865,-61.341,106.934)
O5': (26.372,-60.049,110.265)
O3': (27.833,-57.022,107.983)
OP2: (24.346,-61.318,111.046)
C3': (27.818,-58.431,107.989)
C1': (28.884,-60.450,107.513)
C5': (27.373,-59.056,110.431)
O4': (28.687,-60.383,108.910)
C8: (26.608,-61.531,107.419)
O2': (30.048,-58.436,107.050)
C6: (26.680,-63.720,104.615)
C5: (26.810,-62.808,105.696)
C4: (28.007,-62.149,105.822)
P: (25.542,-60.582,111.518)
C4': (28.334,-59.031,109.280)
C2': (28.764,-59.040,106.974)
C2: (28.856,-63.163,104.041)
N1: (27.746,-63.866,103.788)
N3: (29.074,-62.296,105.021)
N6: (25.577,-64.436,104.352)
N7: (25.943,-62.398,106.707)
N9: (27.865,-61.341,106.934)
O5': (26.372,-60.049,110.265)
O3': (27.833,-57.022,107.983)
C4: (21.883,-60.067,108.745)
N3: (21.667,-60.891,107.666)
OP1: (26.810,-54.805,107.532)
OP2: (25.800,-56.405,109.245)
C2: (22.381,-60.908,106.504)
C1': (24.258,-59.893,105.191)
C3': (23.995,-57.766,104.213)
O5': (25.640,-56.887,106.796)
O4': (25.408,-59.133,105.496)
C5': (26.039,-56.805,105.444)
P: (26.468,-56.189,107.944)
C4': (25.445,-57.938,104.660)
C2': (23.561,-59.211,104.018)
O2': (24.123,-59.731,102.830)
N1: (23.403,-59.964,106.406)
O4: (21.175,-60.178,109.742)
O2: (22.096,-61.700,105.630)
C6: (23.672,-59.129,107.464)
C5: (22.967,-59.147,108.603)
O3': (23.868,-56.962,103.040)
N3: (21.667,-60.891,107.666)
OP1: (26.810,-54.805,107.532)
OP2: (25.800,-56.405,109.245)
C2: (22.381,-60.908,106.504)
C1': (24.258,-59.893,105.191)
C3': (23.995,-57.766,104.213)
O5': (25.640,-56.887,106.796)
O4': (25.408,-59.133,105.496)
C5': (26.039,-56.805,105.444)
P: (26.468,-56.189,107.944)
C4': (25.445,-57.938,104.660)
C2': (23.561,-59.211,104.018)
O2': (24.123,-59.731,102.830)
N1: (23.403,-59.964,106.406)
O4: (21.175,-60.178,109.742)
O2: (22.096,-61.700,105.630)
C6: (23.672,-59.129,107.464)
C5: (22.967,-59.147,108.603)
O3': (23.868,-56.962,103.040)
Image (generated by PyMOL):