Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1358:1359
Extra
PDB:
ATOM 1 O3' G A 357 43.585 5.513 109.970 1.00 41.97 O
ATOM 2 P A A 358 45.003 5.001 109.459 1.00 40.63 P
ATOM 3 OP1 A A 358 45.914 4.873 110.638 1.00 41.00 O
ATOM 4 OP2 A A 358 45.396 5.907 108.330 1.00 40.42 O
ATOM 5 O5' A A 358 44.674 3.554 108.898 1.00 40.32 O
ATOM 6 C5' A A 358 44.197 2.548 109.756 1.00 40.46 C
ATOM 7 C4' A A 358 43.716 1.369 108.976 1.00 40.12 C
ATOM 8 O4' A A 358 42.623 1.743 108.126 1.00 39.89 O
ATOM 9 C3' A A 358 44.709 0.744 108.047 1.00 39.86 C
ATOM 10 O3' A A 358 45.533 -0.118 108.767 1.00 40.03 O
ATOM 11 C2' A A 358 43.805 -0.002 107.106 1.00 39.52 C
ATOM 12 O2' A A 358 43.352 -1.163 107.768 1.00 39.60 O
ATOM 13 C1' A A 358 42.617 0.949 106.986 1.00 39.52 C
ATOM 14 N9 A A 358 42.677 1.866 105.850 1.00 39.29 N
ATOM 15 C8 A A 358 43.505 2.934 105.788 1.00 39.39 C
ATOM 16 N7 A A 358 43.293 3.681 104.749 1.00 39.18 N
ATOM 17 C5 A A 358 42.200 3.132 104.127 1.00 38.95 C
ATOM 18 C6 A A 358 41.466 3.463 102.976 1.00 38.68 C
ATOM 19 N6 A A 358 41.718 4.470 102.205 1.00 38.59 N
ATOM 20 N1 A A 358 40.427 2.724 102.599 1.00 38.51 N
ATOM 21 C2 A A 358 40.133 1.689 103.370 1.00 38.61 C
ATOM 22 N3 A A 358 40.770 1.279 104.484 1.00 38.86 N
ATOM 23 C4 A A 358 41.799 2.041 104.831 1.00 39.02 C
ATOM 24 P U A 359 47.081 -0.311 108.439 1.00 35.56 P
ATOM 25 OP1 U A 359 47.541 -1.334 109.382 1.00 35.78 O
ATOM 26 OP2 U A 359 47.726 1.023 108.452 1.00 35.69 O
ATOM 27 O5' U A 359 47.063 -0.906 106.980 1.00 35.12 O
TER
ATOM 1 O3' A B 358 45.533 -0.118 108.767 1.00 40.03 O
ATOM 2 P U B 359 47.081 -0.311 108.439 1.00 35.56 P
ATOM 3 OP1 U B 359 47.541 -1.334 109.382 1.00 35.78 O
ATOM 4 OP2 U B 359 47.726 1.023 108.452 1.00 35.69 O
ATOM 5 O5' U B 359 47.063 -0.906 106.980 1.00 35.12 O
ATOM 6 C5' U B 359 47.978 -0.494 106.012 1.00 34.93 C
ATOM 7 C4' U B 359 47.268 0.128 104.862 1.00 34.64 C
ATOM 8 O4' U B 359 46.557 1.287 105.330 1.00 34.81 O
ATOM 9 C3' U B 359 48.151 0.650 103.764 1.00 34.44 C
ATOM 10 O3' U B 359 48.538 -0.328 102.854 1.00 34.17 O
ATOM 11 C2' U B 359 47.339 1.766 103.146 1.00 34.33 C
ATOM 12 O2' U B 359 46.411 1.283 102.167 1.00 34.02 O
ATOM 13 C1' U B 359 46.580 2.298 104.357 1.00 34.64 C
ATOM 14 N1 U B 359 47.265 3.426 104.927 1.00 34.91 N
ATOM 15 C2 U B 359 47.432 4.505 104.102 1.00 34.81 C
ATOM 16 O2 U B 359 46.980 4.541 102.996 1.00 34.52 O
ATOM 17 N3 U B 359 48.121 5.555 104.649 1.00 35.08 N
ATOM 18 C4 U B 359 48.620 5.583 105.919 1.00 35.44 C
ATOM 19 O4 U B 359 49.173 6.593 106.232 1.00 35.66 O
ATOM 20 C5 U B 359 48.439 4.436 106.724 1.00 35.54 C
ATOM 21 C6 U B 359 47.782 3.398 106.214 1.00 35.27 C
ATOM 22 P G B 360 50.049 -0.364 102.396 1.00 36.03 P
ATOM 23 OP1 G B 360 50.262 -1.586 101.638 1.00 35.79 O
ATOM 24 OP2 G B 360 50.837 -0.153 103.623 1.00 36.40 O
ATOM 25 O5' G B 360 50.165 0.879 101.445 1.00 35.89 O
TER
ATOM 2 P A A 358 45.003 5.001 109.459 1.00 40.63 P
ATOM 3 OP1 A A 358 45.914 4.873 110.638 1.00 41.00 O
ATOM 4 OP2 A A 358 45.396 5.907 108.330 1.00 40.42 O
ATOM 5 O5' A A 358 44.674 3.554 108.898 1.00 40.32 O
ATOM 6 C5' A A 358 44.197 2.548 109.756 1.00 40.46 C
ATOM 7 C4' A A 358 43.716 1.369 108.976 1.00 40.12 C
ATOM 8 O4' A A 358 42.623 1.743 108.126 1.00 39.89 O
ATOM 9 C3' A A 358 44.709 0.744 108.047 1.00 39.86 C
ATOM 10 O3' A A 358 45.533 -0.118 108.767 1.00 40.03 O
ATOM 11 C2' A A 358 43.805 -0.002 107.106 1.00 39.52 C
ATOM 12 O2' A A 358 43.352 -1.163 107.768 1.00 39.60 O
ATOM 13 C1' A A 358 42.617 0.949 106.986 1.00 39.52 C
ATOM 14 N9 A A 358 42.677 1.866 105.850 1.00 39.29 N
ATOM 15 C8 A A 358 43.505 2.934 105.788 1.00 39.39 C
ATOM 16 N7 A A 358 43.293 3.681 104.749 1.00 39.18 N
ATOM 17 C5 A A 358 42.200 3.132 104.127 1.00 38.95 C
ATOM 18 C6 A A 358 41.466 3.463 102.976 1.00 38.68 C
ATOM 19 N6 A A 358 41.718 4.470 102.205 1.00 38.59 N
ATOM 20 N1 A A 358 40.427 2.724 102.599 1.00 38.51 N
ATOM 21 C2 A A 358 40.133 1.689 103.370 1.00 38.61 C
ATOM 22 N3 A A 358 40.770 1.279 104.484 1.00 38.86 N
ATOM 23 C4 A A 358 41.799 2.041 104.831 1.00 39.02 C
ATOM 24 P U A 359 47.081 -0.311 108.439 1.00 35.56 P
ATOM 25 OP1 U A 359 47.541 -1.334 109.382 1.00 35.78 O
ATOM 26 OP2 U A 359 47.726 1.023 108.452 1.00 35.69 O
ATOM 27 O5' U A 359 47.063 -0.906 106.980 1.00 35.12 O
TER
ATOM 1 O3' A B 358 45.533 -0.118 108.767 1.00 40.03 O
ATOM 2 P U B 359 47.081 -0.311 108.439 1.00 35.56 P
ATOM 3 OP1 U B 359 47.541 -1.334 109.382 1.00 35.78 O
ATOM 4 OP2 U B 359 47.726 1.023 108.452 1.00 35.69 O
ATOM 5 O5' U B 359 47.063 -0.906 106.980 1.00 35.12 O
ATOM 6 C5' U B 359 47.978 -0.494 106.012 1.00 34.93 C
ATOM 7 C4' U B 359 47.268 0.128 104.862 1.00 34.64 C
ATOM 8 O4' U B 359 46.557 1.287 105.330 1.00 34.81 O
ATOM 9 C3' U B 359 48.151 0.650 103.764 1.00 34.44 C
ATOM 10 O3' U B 359 48.538 -0.328 102.854 1.00 34.17 O
ATOM 11 C2' U B 359 47.339 1.766 103.146 1.00 34.33 C
ATOM 12 O2' U B 359 46.411 1.283 102.167 1.00 34.02 O
ATOM 13 C1' U B 359 46.580 2.298 104.357 1.00 34.64 C
ATOM 14 N1 U B 359 47.265 3.426 104.927 1.00 34.91 N
ATOM 15 C2 U B 359 47.432 4.505 104.102 1.00 34.81 C
ATOM 16 O2 U B 359 46.980 4.541 102.996 1.00 34.52 O
ATOM 17 N3 U B 359 48.121 5.555 104.649 1.00 35.08 N
ATOM 18 C4 U B 359 48.620 5.583 105.919 1.00 35.44 C
ATOM 19 O4 U B 359 49.173 6.593 106.232 1.00 35.66 O
ATOM 20 C5 U B 359 48.439 4.436 106.724 1.00 35.54 C
ATOM 21 C6 U B 359 47.782 3.398 106.214 1.00 35.27 C
ATOM 22 P G B 360 50.049 -0.364 102.396 1.00 36.03 P
ATOM 23 OP1 G B 360 50.262 -1.586 101.638 1.00 35.79 O
ATOM 24 OP2 G B 360 50.837 -0.153 103.623 1.00 36.40 O
ATOM 25 O5' G B 360 50.165 0.879 101.445 1.00 35.89 O
TER
Atoms:
OP1: (45.914,4.873,110.638)
OP2: (45.396,5.907,108.330)
C3': (44.709,0.744,108.047)
C1': (42.617,0.949,106.986)
C5': (44.197,2.548,109.756)
O4': (42.623,1.743,108.126)
C8: (43.505,2.934,105.788)
O2': (43.352,-1.163,107.768)
C6: (41.466,3.463,102.976)
C5: (42.200,3.132,104.127)
C4: (41.799,2.041,104.831)
P: (45.003,5.001,109.459)
C4': (43.716,1.369,108.976)
C2': (43.805,-0.002,107.106)
C2: (40.133,1.689,103.370)
N1: (40.427,2.724,102.599)
N3: (40.770,1.279,104.484)
N6: (41.718,4.470,102.205)
N7: (43.293,3.681,104.749)
N9: (42.677,1.866,105.850)
O5': (44.674,3.554,108.898)
O3': (45.533,-0.118,108.767)
OP2: (45.396,5.907,108.330)
C3': (44.709,0.744,108.047)
C1': (42.617,0.949,106.986)
C5': (44.197,2.548,109.756)
O4': (42.623,1.743,108.126)
C8: (43.505,2.934,105.788)
O2': (43.352,-1.163,107.768)
C6: (41.466,3.463,102.976)
C5: (42.200,3.132,104.127)
C4: (41.799,2.041,104.831)
P: (45.003,5.001,109.459)
C4': (43.716,1.369,108.976)
C2': (43.805,-0.002,107.106)
C2: (40.133,1.689,103.370)
N1: (40.427,2.724,102.599)
N3: (40.770,1.279,104.484)
N6: (41.718,4.470,102.205)
N7: (43.293,3.681,104.749)
N9: (42.677,1.866,105.850)
O5': (44.674,3.554,108.898)
O3': (45.533,-0.118,108.767)
C4: (48.620,5.583,105.919)
N3: (48.121,5.555,104.649)
OP1: (47.541,-1.334,109.382)
OP2: (47.726,1.023,108.452)
C2: (47.432,4.505,104.102)
C1': (46.580,2.298,104.357)
C3': (48.151,0.650,103.764)
O5': (47.063,-0.906,106.980)
O4': (46.557,1.287,105.330)
C5': (47.978,-0.494,106.012)
P: (47.081,-0.311,108.439)
C4': (47.268,0.128,104.862)
C2': (47.339,1.766,103.146)
O2': (46.411,1.283,102.167)
N1: (47.265,3.426,104.927)
O4: (49.173,6.593,106.232)
O2: (46.980,4.541,102.996)
C6: (47.782,3.398,106.214)
C5: (48.439,4.436,106.724)
O3': (48.538,-0.328,102.854)
N3: (48.121,5.555,104.649)
OP1: (47.541,-1.334,109.382)
OP2: (47.726,1.023,108.452)
C2: (47.432,4.505,104.102)
C1': (46.580,2.298,104.357)
C3': (48.151,0.650,103.764)
O5': (47.063,-0.906,106.980)
O4': (46.557,1.287,105.330)
C5': (47.978,-0.494,106.012)
P: (47.081,-0.311,108.439)
C4': (47.268,0.128,104.862)
C2': (47.339,1.766,103.146)
O2': (46.411,1.283,102.167)
N1: (47.265,3.426,104.927)
O4: (49.173,6.593,106.232)
O2: (46.980,4.541,102.996)
C6: (47.782,3.398,106.214)
C5: (48.439,4.436,106.724)
O3': (48.538,-0.328,102.854)
Image (generated by PyMOL):