ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3IQN:A52:A53

Extra

PDB:
ATOM 1 O3' A A 51 36.663 72.022 40.945 1.00 79.42 O
ATOM 2 P A A 52 37.265 71.744 39.486 1.00 80.49 P
ATOM 3 OP1 A A 52 36.116 71.630 38.557 1.00 79.57 O
ATOM 4 OP2 A A 52 38.223 70.609 39.614 1.00 80.11 O
ATOM 5 O5' A A 52 38.058 73.085 39.145 1.00 78.79 O
ATOM 6 C5' A A 52 37.409 74.147 38.462 1.00 77.44 C
ATOM 7 C4' A A 52 38.033 75.469 38.824 1.00 76.81 C
ATOM 8 O4' A A 52 38.442 75.441 40.217 1.00 76.30 O
ATOM 9 C3' A A 52 39.320 75.777 38.076 1.00 76.65 C
ATOM 10 O3' A A 52 39.043 76.369 36.817 1.00 75.98 O
ATOM 11 C2' A A 52 40.011 76.764 39.004 1.00 76.47 C
ATOM 12 O2' A A 52 39.556 78.091 38.833 1.00 75.51 O
ATOM 13 C1' A A 52 39.626 76.210 40.378 1.00 77.09 C
ATOM 14 N9 A A 52 40.666 75.355 40.942 1.00 77.92 N
ATOM 15 C8 A A 52 40.699 73.986 40.987 1.00 78.15 C
ATOM 16 N7 A A 52 41.784 73.500 41.540 1.00 78.07 N
ATOM 17 C5 A A 52 42.514 74.628 41.889 1.00 78.80 C
ATOM 18 C6 A A 52 43.766 74.793 42.514 1.00 79.41 C
ATOM 19 N6 A A 52 44.538 73.772 42.906 1.00 78.94 N
ATOM 20 N1 A A 52 44.203 76.058 42.724 1.00 79.15 N
ATOM 21 C2 A A 52 43.430 77.077 42.323 1.00 78.45 C
ATOM 22 N3 A A 52 42.241 77.048 41.721 1.00 78.28 N
ATOM 23 C4 A A 52 41.834 75.779 41.531 1.00 78.47 C
ATOM 24 P U A 53 39.145 75.476 35.486 1.00 75.16 P
ATOM 25 OP1 U A 53 39.426 76.391 34.352 1.00 74.94 O
ATOM 26 OP2 U A 53 37.959 74.583 35.436 1.00 75.06 O
ATOM 27 O5' U A 53 40.432 74.574 35.732 1.00 72.71 O
TER

ATOM 1 O3' A B 52 39.043 76.369 36.817 1.00 75.98 O
ATOM 2 P U B 53 39.145 75.476 35.486 1.00 75.16 P
ATOM 3 OP1 U B 53 39.426 76.391 34.352 1.00 74.94 O
ATOM 4 OP2 U B 53 37.959 74.583 35.436 1.00 75.06 O
ATOM 5 O5' U B 53 40.432 74.574 35.732 1.00 72.71 O
ATOM 6 C5' U B 53 41.708 74.991 35.264 1.00 69.41 C
ATOM 7 C4' U B 53 42.714 74.952 36.387 1.00 66.92 C
ATOM 8 O4' U B 53 42.107 74.338 37.556 1.00 66.36 O
ATOM 9 C3' U B 53 43.941 74.098 36.115 1.00 65.36 C
ATOM 10 O3' U B 53 44.915 74.826 35.376 1.00 63.61 O
ATOM 11 C2' U B 53 44.410 73.763 37.524 1.00 65.14 C
ATOM 12 O2' U B 53 45.114 74.835 38.119 1.00 64.21 O
ATOM 13 C1' U B 53 43.075 73.562 38.247 1.00 64.65 C
ATOM 14 N1 U B 53 42.622 72.160 38.272 1.00 63.14 N
ATOM 15 C2 U B 53 43.302 71.280 39.095 1.00 62.73 C
ATOM 16 O2 U B 53 44.249 71.618 39.783 1.00 63.14 O
ATOM 17 N3 U B 53 42.831 69.989 39.083 1.00 62.47 N
ATOM 18 C4 U B 53 41.772 69.493 38.346 1.00 62.57 C
ATOM 19 O4 U B 53 41.473 68.299 38.442 1.00 62.49 O
ATOM 20 C5 U B 53 41.120 70.461 37.517 1.00 62.89 C
ATOM 21 C6 U B 53 41.558 71.731 37.508 1.00 63.32 C
ATOM 22 P G B 54 45.851 74.053 34.319 1.00 61.50 P
ATOM 23 OP1 G B 54 46.532 75.058 33.470 1.00 61.54 O
ATOM 24 OP2 G B 54 45.047 72.981 33.683 1.00 60.83 O
ATOM 25 O5' G B 54 46.954 73.365 35.235 1.00 58.70 O
TER

Atoms:
OP1: (36.116,71.630,38.557)
OP2: (38.223,70.609,39.614)
C3': (39.320,75.777,38.076)
C1': (39.626,76.210,40.378)
C5': (37.409,74.147,38.462)
O4': (38.442,75.441,40.217)
C8: (40.699,73.986,40.987)
O2': (39.556,78.091,38.833)
C6: (43.766,74.793,42.514)
C5: (42.514,74.628,41.889)
C4: (41.834,75.779,41.531)
P: (37.265,71.744,39.486)
C4': (38.033,75.469,38.824)
C2': (40.011,76.764,39.004)
C2: (43.430,77.077,42.323)
N1: (44.203,76.058,42.724)
N3: (42.241,77.048,41.721)
N6: (44.538,73.772,42.906)
N7: (41.784,73.500,41.540)
N9: (40.666,75.355,40.942)
O5': (38.058,73.085,39.145)
O3': (39.043,76.369,36.817)
C4: (41.772,69.493,38.346)
N3: (42.831,69.989,39.083)
OP1: (39.426,76.391,34.352)
OP2: (37.959,74.583,35.436)
C2: (43.302,71.280,39.095)
C1': (43.075,73.562,38.247)
C3': (43.941,74.098,36.115)
O5': (40.432,74.574,35.732)
O4': (42.107,74.338,37.556)
C5': (41.708,74.991,35.264)
P: (39.145,75.476,35.486)
C4': (42.714,74.952,36.387)
C2': (44.410,73.763,37.524)
O2': (45.114,74.835,38.119)
N1: (42.622,72.160,38.272)
O4: (41.473,68.299,38.442)
O2: (44.249,71.618,39.783)
C6: (41.558,71.731,37.508)
C5: (41.120,70.461,37.517)
O3': (44.915,74.826,35.376)
Image (generated by PyMOL):
PyMOL image
show in jmol