ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1JJ2:0250:0251

Extra

PDB:
ATOM 1 O3' A A 249 95.273 123.239 3.620 1.00 38.49 O
ATOM 2 P A A 250 96.852 123.237 3.946 1.00 39.05 P
ATOM 3 OP1 A A 250 97.041 123.183 5.410 1.00 38.75 O
ATOM 4 OP2 A A 250 97.464 124.349 3.178 1.00 41.60 O
ATOM 5 O5' A A 250 97.384 121.858 3.339 1.00 38.06 O
ATOM 6 C5' A A 250 96.997 121.421 2.015 1.00 37.33 C
ATOM 7 C4' A A 250 97.790 120.192 1.610 1.00 37.78 C
ATOM 8 O4' A A 250 97.377 119.761 0.280 1.00 39.05 O
ATOM 9 C3' A A 250 99.297 120.396 1.511 1.00 38.51 C
ATOM 10 O3' A A 250 99.929 119.145 1.748 1.00 35.71 O
ATOM 11 C2' A A 250 99.473 120.785 0.045 1.00 39.66 C
ATOM 12 O2' A A 250 100.779 120.577 -0.454 1.00 41.74 O
ATOM 13 C1' A A 250 98.480 119.833 -0.611 1.00 40.88 C
ATOM 14 N9 A A 250 97.996 120.234 -1.934 1.00 42.58 N
ATOM 15 C8 A A 250 98.115 119.515 -3.099 1.00 42.25 C
ATOM 16 N7 A A 250 97.554 120.089 -4.135 1.00 43.48 N
ATOM 17 C5 A A 250 97.033 121.271 -3.621 1.00 43.69 C
ATOM 18 C6 A A 250 96.304 122.325 -4.212 1.00 44.00 C
ATOM 19 N6 A A 250 95.952 122.358 -5.499 1.00 42.67 N
ATOM 20 N1 A A 250 95.942 123.358 -3.420 1.00 44.53 N
ATOM 21 C2 A A 250 96.286 123.323 -2.128 1.00 44.43 C
ATOM 22 N3 A A 250 96.962 122.389 -1.456 1.00 43.81 N
ATOM 23 C4 A A 250 97.310 121.379 -2.269 1.00 42.86 C
ATOM 24 P U A 251 101.024 119.011 2.907 1.00 35.73 P
ATOM 25 OP1 U A 251 101.829 120.252 2.980 1.00 35.18 O
ATOM 26 OP2 U A 251 101.711 117.710 2.717 1.00 37.91 O
ATOM 27 O5' U A 251 100.135 118.906 4.222 1.00 37.03 O
TER

ATOM 1 O3' A B 250 99.929 119.145 1.748 1.00 35.71 O
ATOM 2 P U B 251 101.024 119.011 2.907 1.00 35.73 P
ATOM 3 OP1 U B 251 101.829 120.252 2.980 1.00 35.18 O
ATOM 4 OP2 U B 251 101.711 117.710 2.717 1.00 37.91 O
ATOM 5 O5' U B 251 100.135 118.906 4.222 1.00 37.03 O
ATOM 6 C5' U B 251 99.425 117.692 4.547 1.00 33.12 C
ATOM 7 C4' U B 251 98.702 117.856 5.863 1.00 33.17 C
ATOM 8 O4' U B 251 99.675 118.160 6.902 1.00 33.12 O
ATOM 9 C3' U B 251 97.684 118.986 5.913 1.00 32.03 C
ATOM 10 O3' U B 251 96.634 118.608 6.788 1.00 33.24 O
ATOM 11 C2' U B 251 98.497 120.146 6.482 1.00 32.18 C
ATOM 12 O2' U B 251 97.719 121.146 7.105 1.00 32.40 O
ATOM 13 C1' U B 251 99.387 119.417 7.483 1.00 31.25 C
ATOM 14 N1 U B 251 100.668 120.072 7.799 1.00 32.20 N
ATOM 15 C2 U B 251 100.936 120.340 9.130 1.00 32.11 C
ATOM 16 O2 U B 251 100.148 120.114 10.024 1.00 35.32 O
ATOM 17 N3 U B 251 102.165 120.887 9.380 1.00 34.66 N
ATOM 18 C4 U B 251 103.140 121.201 8.459 1.00 34.52 C
ATOM 19 O4 U B 251 104.224 121.641 8.860 1.00 33.23 O
ATOM 20 C5 U B 251 102.785 120.925 7.094 1.00 32.08 C
ATOM 21 C6 U B 251 101.590 120.387 6.817 1.00 31.63 C
ATOM 22 P G B 252 95.331 117.893 6.186 1.00 33.30 P
ATOM 23 OP1 G B 252 94.161 118.296 7.000 1.00 34.27 O
ATOM 24 OP2 G B 252 95.619 116.464 5.971 1.00 32.81 O
ATOM 25 O5' G B 252 95.190 118.548 4.753 1.00 35.27 O
TER

Atoms:
OP1: (97.041,123.183,5.410)
OP2: (97.464,124.349,3.178)
C3': (99.297,120.396,1.511)
C1': (98.480,119.833,-0.611)
C5': (96.997,121.421,2.015)
O4': (97.377,119.761,0.280)
C8: (98.115,119.515,-3.099)
O2': (100.779,120.577,-0.454)
C6: (96.304,122.325,-4.212)
C5: (97.033,121.271,-3.621)
C4: (97.310,121.379,-2.269)
P: (96.852,123.237,3.946)
C4': (97.790,120.192,1.610)
C2': (99.473,120.785,0.045)
C2: (96.286,123.323,-2.128)
N1: (95.942,123.358,-3.420)
N3: (96.962,122.389,-1.456)
N6: (95.952,122.358,-5.499)
N7: (97.554,120.089,-4.135)
N9: (97.996,120.234,-1.934)
O5': (97.384,121.858,3.339)
O3': (99.929,119.145,1.748)
C4: (103.140,121.201,8.459)
N3: (102.165,120.887,9.380)
OP1: (101.829,120.252,2.980)
OP2: (101.711,117.710,2.717)
C2: (100.936,120.340,9.130)
C1': (99.387,119.417,7.483)
C3': (97.684,118.986,5.913)
O5': (100.135,118.906,4.222)
O4': (99.675,118.160,6.902)
C5': (99.425,117.692,4.547)
P: (101.024,119.011,2.907)
C4': (98.702,117.856,5.863)
C2': (98.497,120.146,6.482)
O2': (97.719,121.146,7.105)
N1: (100.668,120.072,7.799)
O4: (104.224,121.641,8.860)
O2: (100.148,120.114,10.024)
C6: (101.590,120.387,6.817)
C5: (102.785,120.925,7.094)
O3': (96.634,118.608,6.788)
Image (generated by PyMOL):
PyMOL image
show in jmol