Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A250:A251
Extra
PDB:
ATOM 1 O3' A A 249 95.481 123.497 4.069 1.00 62.08 O
ATOM 2 P A A 250 97.044 123.476 4.376 1.00 60.80 P
ATOM 3 OP1 A A 250 97.221 123.429 5.842 1.00 62.47 O
ATOM 4 OP2 A A 250 97.692 124.560 3.610 1.00 61.81 O
ATOM 5 O5' A A 250 97.501 122.066 3.791 1.00 61.34 O
ATOM 6 C5' A A 250 97.167 121.652 2.441 1.00 60.24 C
ATOM 7 C4' A A 250 97.988 120.434 2.075 1.00 60.22 C
ATOM 8 O4' A A 250 97.645 119.941 0.756 1.00 61.08 O
ATOM 9 C3' A A 250 99.488 120.650 2.030 1.00 61.02 C
ATOM 10 O3' A A 250 100.076 119.388 2.275 1.00 60.35 O
ATOM 11 C2' A A 250 99.728 121.007 0.568 1.00 61.45 C
ATOM 12 O2' A A 250 101.081 120.785 0.202 1.00 63.64 O
ATOM 13 C1' A A 250 98.769 120.020 -0.103 1.00 61.22 C
ATOM 14 N9 A A 250 98.260 120.366 -1.429 1.00 60.73 N
ATOM 15 C8 A A 250 98.329 119.612 -2.577 1.00 60.94 C
ATOM 16 N7 A A 250 97.720 120.153 -3.604 1.00 61.04 N
ATOM 17 C5 A A 250 97.232 121.355 -3.104 1.00 60.76 C
ATOM 18 C6 A A 250 96.495 122.400 -3.696 1.00 60.74 C
ATOM 19 N6 A A 250 96.128 122.419 -4.978 1.00 59.07 N
ATOM 20 N1 A A 250 96.152 123.446 -2.913 1.00 60.67 N
ATOM 21 C2 A A 250 96.543 123.443 -1.632 1.00 60.88 C
ATOM 22 N3 A A 250 97.250 122.530 -0.967 1.00 60.66 N
ATOM 23 C4 A A 250 97.564 121.500 -1.768 1.00 60.29 C
ATOM 24 P U A 251 101.180 119.239 3.409 1.00 61.76 P
ATOM 25 OP1 U A 251 101.950 120.509 3.450 1.00 61.64 O
ATOM 26 OP2 U A 251 101.888 117.956 3.205 1.00 61.53 O
ATOM 27 O5' U A 251 100.314 119.115 4.733 1.00 62.93 O
TER
ATOM 1 O3' A B 250 100.076 119.388 2.275 1.00 60.35 O
ATOM 2 P U B 251 101.180 119.239 3.409 1.00 61.76 P
ATOM 3 OP1 U B 251 101.950 120.509 3.450 1.00 61.64 O
ATOM 4 OP2 U B 251 101.888 117.956 3.205 1.00 61.53 O
ATOM 5 O5' U B 251 100.314 119.115 4.733 1.00 62.93 O
ATOM 6 C5' U B 251 99.779 117.847 5.167 1.00 63.14 C
ATOM 7 C4' U B 251 99.022 118.049 6.456 1.00 62.89 C
ATOM 8 O4' U B 251 99.967 118.403 7.501 1.00 63.50 O
ATOM 9 C3' U B 251 98.018 119.196 6.386 1.00 62.78 C
ATOM 10 O3' U B 251 96.915 118.919 7.241 1.00 61.78 O
ATOM 11 C2' U B 251 98.839 120.387 6.873 1.00 63.57 C
ATOM 12 O2' U B 251 98.044 121.409 7.434 1.00 63.39 O
ATOM 13 C1' U B 251 99.721 119.727 7.935 1.00 65.28 C
ATOM 14 N1 U B 251 101.015 120.373 8.242 1.00 68.22 N
ATOM 15 C2 U B 251 101.292 120.628 9.580 1.00 70.18 C
ATOM 16 O2 U B 251 100.514 120.375 10.483 1.00 73.18 O
ATOM 17 N3 U B 251 102.517 121.184 9.836 1.00 71.17 N
ATOM 18 C4 U B 251 103.487 121.510 8.927 1.00 71.77 C
ATOM 19 O4 U B 251 104.588 121.898 9.345 1.00 73.43 O
ATOM 20 C5 U B 251 103.130 121.246 7.553 1.00 70.63 C
ATOM 21 C6 U B 251 101.933 120.703 7.266 1.00 68.84 C
ATOM 22 P G B 252 95.603 118.182 6.649 1.00 59.87 P
ATOM 23 OP1 G B 252 94.451 118.654 7.457 1.00 60.13 O
ATOM 24 OP2 G B 252 95.867 116.729 6.518 1.00 60.02 O
ATOM 25 O5' G B 252 95.462 118.754 5.177 1.00 59.75 O
TER
ATOM 2 P A A 250 97.044 123.476 4.376 1.00 60.80 P
ATOM 3 OP1 A A 250 97.221 123.429 5.842 1.00 62.47 O
ATOM 4 OP2 A A 250 97.692 124.560 3.610 1.00 61.81 O
ATOM 5 O5' A A 250 97.501 122.066 3.791 1.00 61.34 O
ATOM 6 C5' A A 250 97.167 121.652 2.441 1.00 60.24 C
ATOM 7 C4' A A 250 97.988 120.434 2.075 1.00 60.22 C
ATOM 8 O4' A A 250 97.645 119.941 0.756 1.00 61.08 O
ATOM 9 C3' A A 250 99.488 120.650 2.030 1.00 61.02 C
ATOM 10 O3' A A 250 100.076 119.388 2.275 1.00 60.35 O
ATOM 11 C2' A A 250 99.728 121.007 0.568 1.00 61.45 C
ATOM 12 O2' A A 250 101.081 120.785 0.202 1.00 63.64 O
ATOM 13 C1' A A 250 98.769 120.020 -0.103 1.00 61.22 C
ATOM 14 N9 A A 250 98.260 120.366 -1.429 1.00 60.73 N
ATOM 15 C8 A A 250 98.329 119.612 -2.577 1.00 60.94 C
ATOM 16 N7 A A 250 97.720 120.153 -3.604 1.00 61.04 N
ATOM 17 C5 A A 250 97.232 121.355 -3.104 1.00 60.76 C
ATOM 18 C6 A A 250 96.495 122.400 -3.696 1.00 60.74 C
ATOM 19 N6 A A 250 96.128 122.419 -4.978 1.00 59.07 N
ATOM 20 N1 A A 250 96.152 123.446 -2.913 1.00 60.67 N
ATOM 21 C2 A A 250 96.543 123.443 -1.632 1.00 60.88 C
ATOM 22 N3 A A 250 97.250 122.530 -0.967 1.00 60.66 N
ATOM 23 C4 A A 250 97.564 121.500 -1.768 1.00 60.29 C
ATOM 24 P U A 251 101.180 119.239 3.409 1.00 61.76 P
ATOM 25 OP1 U A 251 101.950 120.509 3.450 1.00 61.64 O
ATOM 26 OP2 U A 251 101.888 117.956 3.205 1.00 61.53 O
ATOM 27 O5' U A 251 100.314 119.115 4.733 1.00 62.93 O
TER
ATOM 1 O3' A B 250 100.076 119.388 2.275 1.00 60.35 O
ATOM 2 P U B 251 101.180 119.239 3.409 1.00 61.76 P
ATOM 3 OP1 U B 251 101.950 120.509 3.450 1.00 61.64 O
ATOM 4 OP2 U B 251 101.888 117.956 3.205 1.00 61.53 O
ATOM 5 O5' U B 251 100.314 119.115 4.733 1.00 62.93 O
ATOM 6 C5' U B 251 99.779 117.847 5.167 1.00 63.14 C
ATOM 7 C4' U B 251 99.022 118.049 6.456 1.00 62.89 C
ATOM 8 O4' U B 251 99.967 118.403 7.501 1.00 63.50 O
ATOM 9 C3' U B 251 98.018 119.196 6.386 1.00 62.78 C
ATOM 10 O3' U B 251 96.915 118.919 7.241 1.00 61.78 O
ATOM 11 C2' U B 251 98.839 120.387 6.873 1.00 63.57 C
ATOM 12 O2' U B 251 98.044 121.409 7.434 1.00 63.39 O
ATOM 13 C1' U B 251 99.721 119.727 7.935 1.00 65.28 C
ATOM 14 N1 U B 251 101.015 120.373 8.242 1.00 68.22 N
ATOM 15 C2 U B 251 101.292 120.628 9.580 1.00 70.18 C
ATOM 16 O2 U B 251 100.514 120.375 10.483 1.00 73.18 O
ATOM 17 N3 U B 251 102.517 121.184 9.836 1.00 71.17 N
ATOM 18 C4 U B 251 103.487 121.510 8.927 1.00 71.77 C
ATOM 19 O4 U B 251 104.588 121.898 9.345 1.00 73.43 O
ATOM 20 C5 U B 251 103.130 121.246 7.553 1.00 70.63 C
ATOM 21 C6 U B 251 101.933 120.703 7.266 1.00 68.84 C
ATOM 22 P G B 252 95.603 118.182 6.649 1.00 59.87 P
ATOM 23 OP1 G B 252 94.451 118.654 7.457 1.00 60.13 O
ATOM 24 OP2 G B 252 95.867 116.729 6.518 1.00 60.02 O
ATOM 25 O5' G B 252 95.462 118.754 5.177 1.00 59.75 O
TER
Atoms:
OP1: (97.221,123.429,5.842)
OP2: (97.692,124.560,3.610)
C3': (99.488,120.650,2.030)
C1': (98.769,120.020,-0.103)
C5': (97.167,121.652,2.441)
O4': (97.645,119.941,0.756)
C8: (98.329,119.612,-2.577)
O2': (101.081,120.785,0.202)
C6: (96.495,122.400,-3.696)
C5: (97.232,121.355,-3.104)
C4: (97.564,121.500,-1.768)
P: (97.044,123.476,4.376)
C4': (97.988,120.434,2.075)
C2': (99.728,121.007,0.568)
C2: (96.543,123.443,-1.632)
N1: (96.152,123.446,-2.913)
N3: (97.250,122.530,-0.967)
N6: (96.128,122.419,-4.978)
N7: (97.720,120.153,-3.604)
N9: (98.260,120.366,-1.429)
O5': (97.501,122.066,3.791)
O3': (100.076,119.388,2.275)
OP2: (97.692,124.560,3.610)
C3': (99.488,120.650,2.030)
C1': (98.769,120.020,-0.103)
C5': (97.167,121.652,2.441)
O4': (97.645,119.941,0.756)
C8: (98.329,119.612,-2.577)
O2': (101.081,120.785,0.202)
C6: (96.495,122.400,-3.696)
C5: (97.232,121.355,-3.104)
C4: (97.564,121.500,-1.768)
P: (97.044,123.476,4.376)
C4': (97.988,120.434,2.075)
C2': (99.728,121.007,0.568)
C2: (96.543,123.443,-1.632)
N1: (96.152,123.446,-2.913)
N3: (97.250,122.530,-0.967)
N6: (96.128,122.419,-4.978)
N7: (97.720,120.153,-3.604)
N9: (98.260,120.366,-1.429)
O5': (97.501,122.066,3.791)
O3': (100.076,119.388,2.275)
C4: (103.487,121.510,8.927)
N3: (102.517,121.184,9.836)
OP1: (101.950,120.509,3.450)
OP2: (101.888,117.956,3.205)
C2: (101.292,120.628,9.580)
C1': (99.721,119.727,7.935)
C3': (98.018,119.196,6.386)
O5': (100.314,119.115,4.733)
O4': (99.967,118.403,7.501)
C5': (99.779,117.847,5.167)
P: (101.180,119.239,3.409)
C4': (99.022,118.049,6.456)
C2': (98.839,120.387,6.873)
O2': (98.044,121.409,7.434)
N1: (101.015,120.373,8.242)
O4: (104.588,121.898,9.345)
O2: (100.514,120.375,10.483)
C6: (101.933,120.703,7.266)
C5: (103.130,121.246,7.553)
O3': (96.915,118.919,7.241)
N3: (102.517,121.184,9.836)
OP1: (101.950,120.509,3.450)
OP2: (101.888,117.956,3.205)
C2: (101.292,120.628,9.580)
C1': (99.721,119.727,7.935)
C3': (98.018,119.196,6.386)
O5': (100.314,119.115,4.733)
O4': (99.967,118.403,7.501)
C5': (99.779,117.847,5.167)
P: (101.180,119.239,3.409)
C4': (99.022,118.049,6.456)
C2': (98.839,120.387,6.873)
O2': (98.044,121.409,7.434)
N1: (101.015,120.373,8.242)
O4: (104.588,121.898,9.345)
O2: (100.514,120.375,10.483)
C6: (101.933,120.703,7.266)
C5: (103.130,121.246,7.553)
O3': (96.915,118.919,7.241)
Image (generated by PyMOL):